| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,180,419 | G→A | H143H (CAC→CAT) | U712_10915 ← | Uncharacterized protein ypjA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,180,419 | 0 | G | A | 99.1% | 337.9 / ‑5.2 | 109 | H143H (CAC→CAT) | U712_10915 | Uncharacterized protein ypjA |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (51/56); total (52/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
CGAGACCACGAGAAAGTAAGCAAGCCCAATTGAAAAAATACTCAGCCAAAATGTTCCATACCCTATATCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATGTCAAACAAGTAATCAATGACATCGTTGTGCAGCGTCCACACTGCAGCAATTGCAAGATGCCAAAAAGAAAAACGAAAATACGGACTGTACAACACGCCTTGGACTGCCATGGCAAAATGCGAGGCAATCAGCATATAGCCCTCCCACGGCAAGTTACCTTC > CP006881/2180284‑2180553 | tgagaCCACTAGATAGTAAGCTAGCGCGTTTGATAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCATAAAGGATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTtatg < 3:24775/137‑1 (MQ=255) gagaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGc < 7:343385/138‑1 (MQ=255) gagaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGc < 7:430459/138‑1 (MQ=255) gagaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGc < 5:417463/138‑1 (MQ=255) agcccACAAGAAAGTAAGCAAGCGCGCTTGAACAGATACTTAGCCAAACTGTTCCGTCTCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGGCAATGCCAGCGTTATGcc < 6:405256/135‑2 (MQ=255) agaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa < 3:239078/138‑1 (MQ=255) agaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa < 7:424224/138‑1 (MQ=255) agaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa < 8:11814/138‑1 (MQ=255) agaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa < 8:309061/138‑1 (MQ=255) agaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa < 8:311337/138‑1 (MQ=255) agaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa < 5:186095/138‑1 (MQ=255) agaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATAGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa < 2:140898/138‑1 (MQ=255) gaacacaAGAAAGTAAGCAAGCGCGATTGAAAATATACTTAGCCAAAATGTTCCGGATCGTATTTCAGGCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAgt < 8:340579/136‑2 (MQ=255) gaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAgt < 2:176808/139‑2 (MQ=255) tAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGc < 2:348000/123‑1 (MQ=255) aagcaagcGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAATGCATAGAGTATTGCGGCATCATATCAAACTAGTAGTCAATGAGATCGTTATGCAGTGTCCAGACTgcag > 2:380953/1‑138 (MQ=255) agcaagcGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTgcagc > 5:394451/1‑138 (MQ=255) agcaagcGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTgcagc < 4:333456/138‑1 (MQ=255) gcaagcTCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa < 4:11395/121‑1 (MQ=255) gcaagcGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa > 3:11395/1‑121 (MQ=255) gcaagcGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTc > 1:145168/1‑126 (MQ=255) gcaagcGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTc < 2:145168/126‑1 (MQ=255) gcaagcGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCaa > 4:116011/1‑139 (MQ=255) gcaagcGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCaa > 7:59244/1‑139 (MQ=255) gcgcgaTTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCGGTGTCCAGACTGCAGCAATTg > 1:289971/6‑138 (MQ=255) cgcgaTTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGc > 1:322403/5‑138 (MQ=255) cgaTTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGc > 8:194600/3‑136 (MQ=255) aCTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGa > 5:387086/1‑138 (MQ=255) taGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa > 6:247364/2‑98 (MQ=255) taGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGaaaaa > 1:51703/2‑139 (MQ=255) gCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAAc > 8:300497/1‑138 (MQ=255) ccAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACg > 8:346870/1‑138 (MQ=255) ttCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACgg < 7:292259/139‑1 (MQ=255) ttCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACg > 6:185042/1‑138 (MQ=255) ccgtatccTATTTGAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 5:219300/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCGGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 2:289971/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 5:429551/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 6:387086/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 7:194600/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 2:322403/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 7:346870/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 5:108570/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGGCCAGCCTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 2:283403/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTAAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 1:149323/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAAAAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 2:369618/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCAAATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 5:103826/132‑1 (MQ=255) ccgtatccTATTTCAGTAATATAATCAGAAAGCATATAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGAAGCAATTGCAAGATGCCAAAATTAAAAACGAAAATACGGa < 6:285325/132‑1 (MQ=255) tattTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACg > 3:126981/1‑120 (MQ=255) tattTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACg < 4:126981/120‑1 (MQ=255) tattTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACg > 7:443918/1‑128 (MQ=255) tattTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACg < 8:443918/128‑1 (MQ=255) tattTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTataat > 7:40816/1‑138 (MQ=255) tttCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACg > 3:138202/3‑118 (MQ=255) tttCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACg < 4:138202/116‑1 (MQ=255) ttCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACg > 2:26202/2‑139 (MQ=255) ataATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACt > 7:116174/1‑139 (MQ=255) ataATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACt > 4:197706/1‑139 (MQ=255) aaaGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa < 1:191700/57‑1 (MQ=255) aaaGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCAttg > 6:382934/1‑136 (MQ=255) aaaGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCAttg > 3:402931/1‑136 (MQ=255) gagTATTGCGGCATCATATCAAACAAGTAGTCAATGACCTCGTTCTGCAGTGTCCAGACTGCAGCAATTGCAATATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCg < 7:98128/139‑1 (MQ=255) ttGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 4:18448/97‑1 (MQ=255) ttGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa > 3:18448/1‑97 (MQ=255) tGCGGCATCATGTCAAACAAGTAATCAATGACATCGTTGTGCAGCGTCCACACTGCAGCAATTGCAAGATGCCAAAAAGAAAAACGAAAATACGGACTGTACAACACGCCTTGGACTGCCATGGCAAAATGCGAGGCaa > 5:214630/1‑139 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa > 1:311742/1‑96 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 1:47305/96‑1 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa > 2:47305/1‑96 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 2:311742/96‑1 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACt < 1:15617/98‑1 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACt > 2:15617/1‑98 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAATTGCGaagaaa > 5:335802/1‑134 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCaa > 1:244616/1‑139 (MQ=255) tGCGGCATCATATCAAACAAGAAGTCAATGACATCGGTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCaa > 2:97810/1‑139 (MQ=255) cGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAAtt < 5:382934/139‑2 (MQ=255) cGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAAt < 5:398520/138‑1 (MQ=255) cGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAAt < 1:97810/138‑1 (MQ=255) cGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAAt < 3:143547/138‑1 (MQ=255) catcatATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa > 4:282378/1‑91 (MQ=255) catcatATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 3:282378/91‑1 (MQ=255) catcatATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAg > 3:109635/1‑138 (MQ=255) catcatATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAg > 5:287637/1‑138 (MQ=255) tcatATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTga > 4:293348/1‑106 (MQ=255) tcatATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTga < 3:293348/107‑2 (MQ=255) tcatATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCAAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCat > 2:176275/1‑139 (MQ=255) tatCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCatg > 6:187568/3‑136 (MQ=255) gTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACg > 1:101804/1‑74 (MQ=255) gTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACg < 2:101804/74‑1 (MQ=255) gTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 3:73615/76‑1 (MQ=255) gTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa > 4:73615/1‑76 (MQ=255) tCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGc > 1:399659/1‑138 (MQ=255) cAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCa < 8:116174/138‑1 (MQ=255) tGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa > 2:292904/1‑68 (MQ=255) tGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAggc > 7:143580/1‑137 (MQ=255) tGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCAAAAATGAAAAACGAAAATACGGa < 1:292904/68‑1 (MQ=255) aCATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCAc < 3:197706/139‑1 (MQ=255) aCATAGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGtca < 8:289332/138‑3 (MQ=255) cGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCa < 5:270501/129‑1 (MQ=255) cGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCa > 6:270501/1‑129 (MQ=255) cGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCAccagt > 5:389113/1‑136 (MQ=255) cGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCAGGTAGCCCTCCCACGGCAAGTCAccagt > 4:43811/1‑136 (MQ=255) | CGAGACCACGAGAAAGTAAGCAAGCCCAATTGAAAAAATACTCAGCCAAAATGTTCCATACCCTATATCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATGTCAAACAAGTAATCAATGACATCGTTGTGCAGCGTCCACACTGCAGCAATTGCAAGATGCCAAAAAGAAAAACGAAAATACGGACTGTACAACACGCCTTGGACTGCCATGGCAAAATGCGAGGCAATCAGCATATAGCCCTCCCACGGCAAGTTACCTTC > CP006881/2180284‑2180553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |