| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,180,458 | A→T | S130S (TCT→TCA) | U712_10915 ← | Uncharacterized protein ypjA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,180,458 | 0 | A | T | 99.1% | 331.7 / NA | 108 | S130S (TCT→TCA) | U712_10915 | Uncharacterized protein ypjA |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base T (50/57); total (51/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 108 total aligned reads displayed.
ACTCAGCCAAAATGTTCCATACCCTATATCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATGTCAAACAAGTAATCAATGACATCGTTGTGCAGCGTCCACACTGCAGCAATTGCAAGATGCCAAAAAGAAAAACGAAAATACGGACTGTACAACACGCCTTGGACTGCCATGGCAAAATGCGAGGCAATCAGCATATAGCCCTCCCACGGCAAGTTACCTTCTACAGCCAGCACAAGAAAATTCATAGCGACCGCCCA > CP006881/2180323‑2180589 | taGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGaaaaa > 1:51703/2‑139 (MQ=255) gCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAAc > 8:300497/1‑138 (MQ=255) ccAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACg > 8:346870/1‑138 (MQ=255) ttCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACgg < 7:292259/139‑1 (MQ=255) ttCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACg > 6:185042/1‑138 (MQ=255) ccgtatccTATTTGAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 5:219300/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCGGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 2:289971/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 5:429551/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 2:322403/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 7:346870/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 6:387086/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 5:108570/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 7:194600/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGGCCAGCCTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 2:283403/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTAAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 1:149323/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAAAAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 2:369618/132‑1 (MQ=255) ccgtatccTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCAAATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 5:103826/132‑1 (MQ=255) ccgtatccTATTTCAGTAATATAATCAGAAAGCATATAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGAAGCAATTGCAAGATGCCAAAATTAAAAACGAAAATACGGa < 6:285325/132‑1 (MQ=255) tattTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACg < 4:126981/120‑1 (MQ=255) tattTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACg > 3:126981/1‑120 (MQ=255) tattTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACg > 7:443918/1‑128 (MQ=255) tattTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACg < 8:443918/128‑1 (MQ=255) tttCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACg < 4:138202/116‑1 (MQ=255) tttCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACg > 3:138202/3‑118 (MQ=255) ttCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACg > 8:110651/2‑139 (MQ=255) ttCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACg > 2:26202/2‑139 (MQ=255) ataATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACt > 7:116174/1‑139 (MQ=255) ataATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACt > 4:197706/1‑139 (MQ=255) aaaGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCAttg > 6:382934/1‑136 (MQ=255) aaaGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCAttg > 3:402931/1‑136 (MQ=255) gagTATTGCGGCATCATATCAAACAAGTAGTCAATGACCTCGTTCTGCAGTGTCCAGACTGCAGCAATTGCAATATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCg < 7:98128/139‑1 (MQ=255) gTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 4:262305/100‑1 (MQ=255) gTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa > 3:262305/1‑100 (MQ=255) ttGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 4:18448/97‑1 (MQ=255) ttGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa > 3:18448/1‑97 (MQ=255) tGCGGCATCATGTCAAACAAGTAATCAATGACATCGTTGTGCAGCGTCCACACTGCAGCAATTGCAAGATGCCAAAAAGAAAAACGAAAATACGGACTGTACAACACGCCTTGGACTGCCATGGCAAAATGCGAGGCaa > 5:214630/1‑139 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa > 1:311742/1‑96 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 1:47305/96‑1 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa > 2:47305/1‑96 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 2:311742/96‑1 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACt > 2:15617/1‑98 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACt < 1:15617/98‑1 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAATTGCGaagaaa > 5:335802/1‑134 (MQ=255) tGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCaa > 1:244616/1‑139 (MQ=255) tGCGGCATCATATCAAACAAGAAGTCAATGACATCGGTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCaa > 2:97810/1‑139 (MQ=255) cGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAAtt < 5:382934/139‑2 (MQ=255) cGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAAt < 5:398520/138‑1 (MQ=255) cGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAAt < 3:143547/138‑1 (MQ=255) catcatATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa > 4:282378/1‑91 (MQ=255) catcatATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 3:282378/91‑1 (MQ=255) catcatATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAg > 3:109635/1‑138 (MQ=255) catcatATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAg > 5:287637/1‑138 (MQ=255) tcatATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTga < 3:293348/107‑2 (MQ=255) tcatATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTga > 4:293348/1‑106 (MQ=255) tcatATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCAAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCat > 2:176275/1‑139 (MQ=255) tatCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCatg > 6:187568/3‑136 (MQ=255) gTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACg < 2:101804/74‑1 (MQ=255) gTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACg > 1:101804/1‑74 (MQ=255) gTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa > 4:73615/1‑76 (MQ=255) gTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 3:73615/76‑1 (MQ=255) tCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGc > 1:399659/1‑138 (MQ=255) cAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCa < 8:116174/138‑1 (MQ=255) tGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa > 2:292904/1‑68 (MQ=255) tGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAggc > 7:143580/1‑137 (MQ=255) tGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCAAAAATGAAAAACGAAAATACGGa < 1:292904/68‑1 (MQ=255) aCATCGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCAc < 3:197706/139‑1 (MQ=255) aCATAGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGtca < 8:289332/138‑3 (MQ=255) cGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCa < 5:270501/129‑1 (MQ=255) cGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCa > 6:270501/1‑129 (MQ=255) cGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCAccagt > 5:389113/1‑136 (MQ=255) cGTTATGCAGTGTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCAGGTAGCCCTCCCACGGCAAGTCAccagt > 4:43811/1‑136 (MQ=255) tgTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa > 1:143748/2‑52 (MQ=255) tgTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 3:120754/51‑1 (MQ=255) tgTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa > 4:120754/2‑52 (MQ=255) tgTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGa < 2:143748/51‑1 (MQ=255) tgTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCa < 7:128784/81‑1 (MQ=255) tgTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCa > 8:128784/2‑82 (MQ=255) tgTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCaa > 6:393393/2‑95 (MQ=255) tgTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCaa < 5:393393/94‑1 (MQ=255) tgTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAAt > 6:409669/2‑96 (MQ=255) tgTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAAt < 3:109803/95‑1 (MQ=255) tgTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAAt < 5:409669/95‑1 (MQ=255) tgTCCAGACTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAAt > 4:109803/2‑96 (MQ=255) acTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTataat > 1:391387/1‑53 (MQ=255) acTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGaa < 5:185042/139‑1 (MQ=255) acTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGaa < 7:300497/139‑1 (MQ=255) cagcaATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGaaaa < 4:109635/137‑1 (MQ=255) agcaATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCa > 5:268168/1‑70 (MQ=255) agcaATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCa < 6:268168/70‑1 (MQ=255) agcaATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAAtt > 1:263372/1‑138 (MQ=255) gcaATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCGCACGGCAAGTCACCAGTTACTGCAAGCACTAGAAAATTCa < 5:71429/139‑1 (MQ=255) aaTTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCa > 7:190898/1‑137 (MQ=255) gCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGcca > 6:389325/1‑137 (MQ=255) gCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGcca > 2:132340/1‑137 (MQ=255) cAAGATTCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCAc < 5:389325/139‑1 (MQ=255) cAAGATGCCAAAATTAAAAACGAAAATACGGACTGTATAATACGCCTTTAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGACCTCCCACGGCAAGTCACCAGTTACTGGAAGCACAAGAAAATTCATAGCCAc < 8:37432/139‑1 (MQ=255) cAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCGTAGcca < 1:88286/138‑3 (MQ=255) cAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCAc < 8:190898/139‑1 (MQ=255) tGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGccc < 7:7633/139‑1 (MQ=255) ccAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCa < 4:402931/138‑1 (MQ=255) | ACTCAGCCAAAATGTTCCATACCCTATATCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATGTCAAACAAGTAATCAATGACATCGTTGTGCAGCGTCCACACTGCAGCAATTGCAAGATGCCAAAAAGAAAAACGAAAATACGGACTGTACAACACGCCTTGGACTGCCATGGCAAAATGCGAGGCAATCAGCATATAGCCCTCCCACGGCAAGTTACCTTCTACAGCCAGCACAAGAAAATTCATAGCGACCGCCCA > CP006881/2180323‑2180589 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |