| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,180,557 | A→T | A97A (GCT→GCA) | U712_10915 ← | Uncharacterized protein ypjA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,180,557 | 0 | A | T | 98.9% | 273.7 / NA | 87 | A97A (GCT→GCA) | U712_10915 | Uncharacterized protein ypjA |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base T (42/44); total (42/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACTGCAGCAATTGCAAGATGCCAAAAAGAAAAACGAAAATACGGACTGTACAACACGCCTTGGACTGCCATGGCAAAATGCGAGGCAATCAGCATATAGCCCTCCCACGGCAAGTTACCTTCTACAGCCAGCACAAGAAAATTCATAGCGACCGCCCATAGGCCATACTTTACGAGGGTGACTAGCGCAAGCGCCTCAAAGAGCGGAGCGTTCCGTTTCATGATAAAGGCGAGCAGCACAAACAGAAAGAAAAACGT > CP006881/2180432‑2180688 | acTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGaa < 7:300497/139‑1 (MQ=255)acTGCAGCAATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGaa < 5:185042/139‑1 (MQ=255) cagcaATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGaaaa < 6:287637/137‑1 (MQ=255) cagcaATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGaaaa < 4:109635/137‑1 (MQ=255) agcaATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAAtt > 1:263372/1‑138 (MQ=255) gcaATTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCGCACGGCAAGTCACCAGTTACTGCAAGCACTAGAAAATTCa < 5:71429/139‑1 (MQ=255) aaTTGCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCa > 7:190898/1‑137 (MQ=255) gCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGcca > 6:389325/1‑137 (MQ=255) gCAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGcca > 2:132340/1‑137 (MQ=255) cAAGATTCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCAc < 5:389325/139‑1 (MQ=255) cAAGATGCCAAAATTAAAAACGAAAATACGGACTGTATAATACGCCTTTAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGACCTCCCACGGCAAGTCACCAGTTACTGGAAGCACAAGAAAATTCATAGCCAc < 8:37432/139‑1 (MQ=255) cAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCGTAGcca < 1:88286/138‑3 (MQ=255) cAAGATGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCAc < 8:190898/139‑1 (MQ=255) tGCCAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGccc < 7:7633/139‑1 (MQ=255) ccAAAATGAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCa < 4:402931/138‑1 (MQ=255) tgAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCa < 2:51703/138‑1 (MQ=255) tgAAAAACGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGGCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCa < 6:394451/138‑1 (MQ=255) aaaaaCGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATa > 5:428146/1‑139 (MQ=255) cGAAAATACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTa < 2:399659/139‑1 (MQ=255) aaaaTACGGACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACg < 5:193320/139‑1 (MQ=255) aaaTTCGTACGGTACAACACGCCTTGGACTGCCATTGAAAAATCCGCGGCAATCAGCATTTTGCCGTCCCTCGGCAATTTACCTTCTACAGCCAGCACAAGAAAATTCATCGCGACCGCCCATAGGCCATACTTTACg < 6:214630/138‑1 (MQ=255) gACTGTATAATACGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAAc < 6:389113/139‑1 (MQ=255) tataatacGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAggg < 8:112040/124‑1 (MQ=255) tataatacGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAggg > 7:112040/7‑130 (MQ=255) tataatacGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAgcg > 5:207334/7‑139 (MQ=255) tacGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCAcc > 2:408185/2‑100 (MQ=255) tacGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCAcc < 1:408185/99‑1 (MQ=255) tacGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACg < 5:311058/120‑1 (MQ=255) tacGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACg > 6:311058/2‑121 (MQ=255) tacGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACt > 7:259771/2‑130 (MQ=255) tacGCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAgc < 6:91125/138‑1 (MQ=255) tacGCATTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACt < 8:259771/129‑1 (MQ=255) gCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAACATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGcc > 8:183128/1‑139 (MQ=255) gCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCa > 8:229500/1‑109 (MQ=255) gCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCa < 7:229500/109‑1 (MQ=255) gCCTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAAATAGCGCAAGCGcc > 4:403370/1‑139 (MQ=255) ccTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACg < 2:328342/117‑1 (MQ=255) ccTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACg > 1:328342/1‑117 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAACTTCATAGCCACCGCCCa > 5:264696/1‑100 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCAc < 8:229581/94‑1 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGccc > 5:267346/1‑99 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGccc > 7:375017/1‑99 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGccc < 6:267346/99‑1 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGccc < 8:375017/99‑1 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCa < 6:264696/100‑1 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCAt < 5:303351/101‑1 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCAt < 3:278381/101‑1 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCAt > 6:303351/1‑101 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCAt > 4:278381/1‑101 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATa > 2:104154/1‑109 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATa < 1:104154/109‑1 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACtt < 2:316940/112‑1 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACtt > 1:316940/1‑112 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACg > 7:404769/1‑116 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACg < 8:404769/116‑1 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAgg < 3:88301/119‑1 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAgg > 4:88301/1‑119 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAgcg < 1:82060/135‑1 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAgcg > 2:82060/1‑135 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCt > 1:268630/1‑138 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCt > 8:209732/1‑138 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCt > 3:374382/1‑138 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCTc > 6:231679/1‑139 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCTc > 6:216762/1‑139 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCTc > 4:263119/1‑139 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCTc > 7:131559/1‑139 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCTc > 7:327833/1‑139 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCTc > 5:364554/1‑139 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCTc > 3:359684/1‑139 (MQ=255) cTTGAACTGCCATTGCAAAATGCGAAGCAATTAGAATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCACATAGTCCATACTTTACGAGGGTAACTATCGCAAGCGCCt > 5:62780/1‑138 (MQ=255) cTTGAACTGCCATTGAAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCAc > 7:229581/1‑94 (MQ=255) aaCTGCCATTGCAAAATGCGAAGCAATTAGCAGGTAGCCCACCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCTCtaa < 6:335802/137‑1 (MQ=255) ccATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAg < 5:95738/124‑1 (MQ=255) ccATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAg > 6:95738/1‑124 (MQ=255) ccATTGCAAAATGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCTCTAAaagcg < 1:26202/138‑1 (MQ=255) aTGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGc < 5:147762/86‑1 (MQ=255) aTGCGAAGCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGc > 6:147762/1‑86 (MQ=255) agCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCa < 8:141508/74‑1 (MQ=255) agCAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCa > 7:141508/2‑75 (MQ=255) cAATTAGCATGTAGCCCTCCCACGGCAAGTCACCAGGTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGCCCATACTTTACGAGGGAAACTAGCGCAAGCGCCTCTAAAAGCGGAGCATTCCGTTTCATGa < 8:143580/138‑1 (MQ=255) atgtaGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCTCTAAAAGCGGAGCATTCCGTTTCATGAGAAAGGcaa < 1:293912/136‑3 (MQ=255) taGCCCTCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCTCTAAAAGCGGAGCATTCCGTTTCATGAGAAAGGCAagc < 5:216762/138‑1 (MQ=255) tCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCTCTAAAAGCGGAGCATTCCGTTTCATGAGAAAGGCAAGCAGcaca > 4:164490/1‑138 (MQ=255) tCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCTCTAAAAGCGGAGCATTCCGTTTCATGAGAAAGGCAAGCAGcaca > 7:165715/1‑138 (MQ=255) tCCCACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCTCTAAAAGCGGAGCATTCCGTTTCATGAGAAAGGCAAGCAGcaca > 6:296487/1‑138 (MQ=255) ccACGGCAAGTCACCAGTTACTGCAAGCACAAGAAAATTCATAGCCACCGCCCATAGGCCATACTTTACGAGGGTAACTAGCGCAAGCGCCTCTAAAAGCGGAGCATTCCGTTTCATGAGAAAGGCAAGCAGCACaa < 2:244616/137‑1 (MQ=255) ctgttACTGCAAGCACAAGAAAATTCATACCCACCGCCAATAGGCAATACTTAACTAGGGTAAGTAGCGCAAGCGCCTCTAAAAGCGGAGCATTCCGTTTCATGAGAAAGGCAAGCAGCACAAACAGAAAGAAAAACGt < 7:209732/135‑1 (MQ=255) | ACTGCAGCAATTGCAAGATGCCAAAAAGAAAAACGAAAATACGGACTGTACAACACGCCTTGGACTGCCATGGCAAAATGCGAGGCAATCAGCATATAGCCCTCCCACGGCAAGTTACCTTCTACAGCCAGCACAAGAAAATTCATAGCGACCGCCCATAGGCCATACTTTACGAGGGTGACTAGCGCAAGCGCCTCAAAGAGCGGAGCGTTCCGTTTCATGATAAAGGCGAGCAGCACAAACAGAAAGAAAAACGT > CP006881/2180432‑2180688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |