Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,180,942	T→G	intergenic (‑95/+16)	U712_10915 ← / ← U712_10920	Uncharacterized protein ypjA/Menaquinol‑cytochrome c reductase cytochrome b/c subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,180,942	0	T	G	100.0%	255.5 / NA	79	intergenic (‑95/+16)	U712_10915/U712_10920	Uncharacterized protein ypjA/Menaquinol‑cytochrome c reductase cytochrome b/c subunit
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (53/26);  total (53/26)

AGCATCGGCTGCCGTCCTAATACATATTGAAACCATTTCACATCAAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTTACAATTCACAACACGTTATTTTGCGGTTGTTTCAGAAATAAATTTCGCAAGTTCTTCGAGTTGCTTATCATTCCCTTTGAATACGCCCGCCGGCATTTTGCCTTTCCCTTCAACAGCAATTTTTTTGATTTCATC  >  CP006881/2180807‑2181077                                                                                                                                        |                                                                                                                                        aGCATCGGCCGCTGCCCTAATACATATTGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGAc                                                                                                                                       >  3:160945/1‑138 (MQ=255)      cGGCCGCTGCCCTAATACATATTGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTca                                                                                                                                 >  5:154380/1‑139 (MQ=255)             tgcccTAATACATATTGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACg                                                                                                                          >  6:413054/4‑139 (MQ=255)               cccTAATACATATTGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACg                                                                                                                          <  5:216266/136‑1 (MQ=255)                   aaTACATATTGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTAttt                                                                                                                    >  8:166452/1‑139 (MQ=255)                    aTACATATTGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATACTTCACTTTGACAATTCACAATACGTTAtttt                                                                                                                   >  1:353289/1‑139 (MQ=255)                       cATATTGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCg                                                                                                                >  1:19656/1‑139 (MQ=255)                         tatTGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAATTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGgt                                                                                                              >  1:329247/1‑139 (MQ=255)                         tatTGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGgt                                                                                                              <  2:16812/139‑1 (MQ=255)                         tatTGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGgt                                                                                                              >  1:7883/1‑139 (MQ=255)                         tatTGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGgt                                                                                                              >  1:429794/1‑139 (MQ=255)                         tatTGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGgt                                                                                                              >  1:106181/1‑139 (MQ=255)                          atTGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGgtt                                                                                                             >  3:307080/1‑139 (MQ=255)                          atTGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGgtt                                                                                                             >  6:209285/1‑139 (MQ=255)                          atTGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGgtt                                                                                                             >  4:7530/1‑139 (MQ=255)                          atTGAAACCATTTCACATCGAATCAACTCTCAGTCTCTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTAATTTTGCgg                                                                                                               >  1:437835/1‑137 (MQ=255)                          atTGAAACCATTTCACATCGAATAAACTCTCAGAATGTAAAAATAATATGTCCATATAAAAAACCTGAACCCGGCTCTCCATATGATAATAAAAGAAAATCATTCCATTTGACAATTAACAATACGTTATTTTGCGgtt                                                                                                             >  4:56618/1‑139 (MQ=255)                            tGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAATGTATATCATTCCATTTGCCAAATCACAATACGTTATTTTGCGgttgt                                                                                                           >  5:55691/1‑139 (MQ=255)                            tGAAACCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCAATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCtgttgt                                                                                                           >  5:347407/1‑139 (MQ=255)                              aaaCCATTTCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGgttgtt                                                                                                          >  3:340785/1‑138 (MQ=255)                              aaaCCATTTCACATCCAATCATCTCTCAGTCTGTAAAAATAATATATCCATATAAAAAAGCTGACGCCGGGGCAGCTAGTGATAATAAACGTATTTCCTTCCAGTTGACAATTCACAATACGTTATTATGCgtttgttt                                                                                                         >  8:316444/1‑139 (MQ=255)                                    tttCACATCGAATCAACTCTCAGTCTGTAAAACTAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGCCAATTCACCATACGTTATTTTGCGGTTGTTTCAGaaa                                                                                                   >  8:51091/1‑139 (MQ=255)                                    tttCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGCCGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGaaa                                                                                                   >  4:128019/1‑139 (MQ=255)                                    tttCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGaaa                                                                                                   >  4:300666/1‑139 (MQ=255)                                    tttCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGaaa                                                                                                   >  2:164104/1‑139 (MQ=255)                                     ttCACATCGAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCATTTGATAATAAAAGTATATCCTACCAATTGACAATTCACAATACGGTATTTTGCGGTTGTTTCAGaaa                                                                                                   >  6:216205/1‑138 (MQ=255)                                            cgaatcaaCTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAAtttt                                                                                           >  3:146947/3‑138 (MQ=255)                                              aatcaaCTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAAttttg                                                                                          >  4:23978/1‑136 (MQ=255)                                                    ctctCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACATGACGTTATTTTGCGGTTGTTTCAGAAATATATTTTGAAAGttc                                                                                   >  8:80471/1‑139 (MQ=255)                                                     aggcAGGCTGAAAAAATAATATGTCCAAATACAACAGCGGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGGTGTTTCAGAAATAAATTTTGCAAGttct                                                                                  <  6:221574/136‑1 (MQ=255)                                                         aGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAAtt                                                                                                                                   >  7:202555/1‑86 (MQ=255)                                                         aGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAAtt                                                                                                                                   <  8:202555/86‑1 (MQ=255)                                                         aGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGttcttc                                                                                >  7:59110/1‑137 (MQ=255)                                                           tCTTTAAAATAAATATGTCAATAAAAAAACGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAg                                                                             <  4:340785/138‑1 (MQ=255)                                                               tAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAgctgct                                                                        >  4:202458/1‑139 (MQ=255)                                                                  aaaTAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTTGAGCTGCTTAt                                                                     <  2:7883/139‑1 (MQ=255)                                                                     taataTGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCAt                                                                  <  5:413054/139‑1 (MQ=255)                                                                     taaaaTGACCAAAAAAAAACGCGCACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCAt                                                                  <  2:168618/139‑1 (MQ=255)                                                                         atGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTtcc                                                              >  2:231592/1‑139 (MQ=255)                                                                         atGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTACTTCGAGCTGCTTATCATTtcc                                                              >  2:311902/1‑139 (MQ=255)                                                                            tCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCAt                                                                  <  3:345656/132‑1 (MQ=255)                                                                            tCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCAt                                                                  >  4:345656/1‑132 (MQ=255)                                                                              cATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACATTTCGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCAGTTCCTTTGa                                                         >  2:370465/1‑139 (MQ=255)                                                                               atatAAAAAAGATGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGaa                                                        <  8:59110/139‑1 (MQ=255)                                                                                 ataAAAAAGCTGACGCTGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCaa                                                                                       >  8:130138/1‑106 (MQ=255)                                                                                 ataAAAAAGCTGACGCTGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCaa                                                                                       <  7:130138/106‑1 (MQ=255)                                                                                 aaaaaaaaGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGaaca                                                      <  3:7530/137‑3 (MQ=255)                                                                                   aaaaaaGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAacaca                                                    >  6:434300/1‑138 (MQ=255)                                                                                         gCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACAcacccgcc                                              <  3:213549/139‑1 (MQ=255)                                                                                         catGACGCCGGGTCAGATTTTGATAATAAAAGTATAACCTTCCAATTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCACGTTCTTCGATCTGCTTATCATTTCCTTTGAACAcacccgcc                                              <  6:347407/137‑1 (MQ=255)                                                                                            gACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCgg                                            >  8:241293/1‑138 (MQ=255)                                                                                               gCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCAtt                                        <  5:198439/139‑1 (MQ=255)                                                                                                     tCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCt                                  <  4:63525/139‑1 (MQ=255)                                                                                                     tCAGCTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCt                                  <  7:166452/139‑1 (MQ=255)                                                                                                         cTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTcc                              >  3:366824/1‑139 (MQ=255)                                                                                                         cTTTTGATAATAAAAGTATATCCTTCCATTTGACAATTAACAATACGTTATTTTTCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTGGAGATTGTTATAATTTGCTTTGAACACACCCGCCGGCATTTTTCCGTTcc                              >  6:40014/1‑139 (MQ=255)                                                                                                                   taaAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCt                                  >  1:60463/1‑125 (MQ=255)                                                                                                                   taaAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCt                                  <  2:60463/125‑1 (MQ=255)                                                                                                                   taaAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGc                    >  8:224443/1‑139 (MQ=255)                                                                                                                   taaAAGTATATCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGc                    >  1:48899/1‑139 (MQ=255)                                                                                                                           tatCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGAttttt             <  5:434300/138‑1 (MQ=255)                                                                                                                           tatCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGAttttt             >  8:123463/1‑138 (MQ=255)                                                                                                                           tatCCTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGAttttt             <  7:123463/138‑1 (MQ=255)                                                                                                                              ccTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGATTTTTTTGa         >  8:281314/1‑139 (MQ=255)                                                                                                                               cTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGATTTTTTTGAt        <  3:23978/139‑1 (MQ=255)                                                                                                                               cTTCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGATTTTTTTGAt        <  5:40014/139‑1 (MQ=255)                                                                                                                                ttCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGATTTTTTTGAtt       >  2:397756/1‑139 (MQ=255)                                                                                                                                 tCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGATTTTTTTGAttt      >  1:204215/1‑139 (MQ=255)                                                                                                                                 tCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGATTTTTTTGAttt      >  1:210112/1‑139 (MQ=255)                                                                                                                                 tCCATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGATTTTTTTGAtt       >  3:399970/1‑138 (MQ=255)                                                                                                                                  ccATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCAtt                                                                 <  7:252557/79‑1 (MQ=255)                                                                                                                                  ccATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCAtt                                                                 >  8:144809/1‑79 (MQ=255)                                                                                                                                  ccATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCAtt                                                                 >  8:252557/1‑79 (MQ=255)                                                                                                                                  ccATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCAtt                                                                 <  7:144809/79‑1 (MQ=255)                                                                                                                                  ccATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACCCCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGATTTTTTTGAttt      >  3:42135/1‑138 (MQ=255)                                                                                                                                  ccATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCt                                  >  2:344644/1‑110 (MQ=255)                                                                                                                                  ccATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCt                                  <  1:344644/110‑1 (MQ=255)                                                                                                                                  ccATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGATTTTTTTg          <  1:426356/134‑1 (MQ=255)                                                                                                                                  ccATTTGACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGATTTTTTTg          >  2:426356/1‑134 (MQ=255)                                                                                                                                     tttgACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGATTTTTTTGATTTCATc  >  4:20233/1‑139 (MQ=255)                                                                                                                                     tttgACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGATTTTTTTGATTTCATc  <  3:128019/139‑1 (MQ=255)                                                                                                                                     tttgACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGATTTTTTTGATTTCATc  <  7:241293/139‑1 (MQ=255)                                                                                                                                     tttgACAATTCACAATACGTTATTTTGCGGTTGTTTCAGAAATAAATTTTGCAAGTTCTTCGAGCTGCTTATCATTTCCTTTGAACACACCCGCCGGCATTTTGCCTTTCCCTTCTACAGCGATTTTTTTGATTTCATc  <  4:366824/139‑1 (MQ=255)                                                                                                                                        |                                                                                                                                        AGCATCGGCTGCCGTCCTAATACATATTGAAACCATTTCACATCAAATCAACTCTCAGTCTGTAAAAATAATATGTCCATATAAAAAAGCTGACGCCGGGTCAGCTTTTGATAATAAAAGTATATCCTTCCATTTTACAATTCACAACACGTTATTTTGCGGTTGTTTCAGAAATAAATTTCGCAAGTTCTTCGAGTTGCTTATCATTCCCTTTGAATACGCCCGCCGGCATTTTGCCTTTCCCTTCAACAGCAATTTTTTTGATTTCATC  >  CP006881/2180807‑2181077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑