| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,172,439 | C→T | K29K (AAG→AAA) | U712_10860 ← | 3‑methyl‑2‑oxobutanoate hydroxymethyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,172,439 | 0 | C | T | 97.0% | 292.1 / ‑1.1 | 101 | K29K (AAG→AAA) | U712_10860 | 3‑methyl‑2‑oxobutanoate hydroxymethyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (1/2); new base T (45/52); total (47/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.18e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
GCCCCTTTTAACAGCTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCGAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGCTTAGCTGCCGGATAATCATAAGCGGTCAGCATCACAATCGGTTCTTCATTCTCCTTCATTTTTAGAAAATCGAGTTTTGTTTTCATGTTTTCTCCTCCTCATGTTTAGAGGAGATGAGCTGCCGTTTTCTTATA > CP006881/2172307‑2172573 | accccTTTTAACGGCTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCt > 5:98821/2‑139 (MQ=255) ccccTTTTAACGGCTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTg < 7:80135/139‑1 (MQ=255) cccTTTTAACAGCTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCGAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGCTTAg > 6:86674/1‑135 (MQ=255) cccTTTTAACAGCTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCGAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGCTTAg < 5:86674/135‑1 (MQ=255) cccTCTTAACGGCTTATGTATGATGCATCATGGCCGCAACTGTCCCACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGc < 4:401696/139‑1 (MQ=255) ccTTTTAACAGCTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCGAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGCTTAGCTGcc < 2:270325/139‑1 (MQ=255) ttAACGGCTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCgg < 1:259269/137‑1 (MQ=255) ttAACGGCTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGa > 2:275005/1‑138 (MQ=255) ttAACGGCTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGa < 6:89906/138‑1 (MQ=255) ttAACGGCTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGa < 4:204112/138‑1 (MQ=255) accggCTTTCGTACGATGGATCTAGTCCGCAACTCACACCCGGACAGTTGAAACTACCCCGAGGACGACCATTCCAAGTTAATCTCCGACTAAATTCTAGTCAACACCCCCTTCATCAGCATGTTTAGGCGCCGCATa < 8:149158/134‑1 (MQ=255) cTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCgg < 1:67186/130‑1 (MQ=255) cTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCgg > 2:67186/1‑130 (MQ=255) cTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATACTCAt > 4:329946/1‑138 (MQ=255) cTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCAt > 5:383773/1‑138 (MQ=255) cTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCAt > 4:336101/1‑138 (MQ=255) cTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCAt > 1:53891/1‑138 (MQ=255) cTTTTGTATGATGGATCATGTCCGCAACTGTCACACCCACATTTTAATAAAGTCATATGACTAACATTCCAAGTGAATAACCGAAAAAAATCATTACAACTCACGATTGTTAAGCAACTTTATCTTCCGGATAATCAt > 2:376102/1‑138 (MQ=255) gTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCg < 6:63110/138‑1 (MQ=255) gTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCg < 8:12747/138‑1 (MQ=255) gTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTGCAGCAAGTTTAGCTGCCGGATAATCATAAGCg < 1:142799/138‑1 (MQ=255) tATGATTGATCATGGCCGCAACTGTCACAGCGACAGTTGAATCAAGGCCGAGGACGACCAATCCTAGTGAATCCCCGACAAAACTCATGTCAACTCCCGCGTGTTCAGAAAGTTTAGCTGCCGGATAATCATAAGCGGt < 7:339179/139‑1 (MQ=255) ggATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCa < 1:135781/138‑1 (MQ=255) cATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATgac > 4:144696/1‑138 (MQ=255) cATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATgac > 8:12228/1‑138 (MQ=255) gTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAAt < 7:436878/138‑1 (MQ=255) cGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCgg < 3:144696/138‑1 (MQ=255) cAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGttc > 6:232210/1‑139 (MQ=255) cAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGttc > 8:114888/1‑139 (MQ=255) tCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCaga < 7:63980/139‑3 (MQ=255) tCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCaga < 7:70844/139‑3 (MQ=255) tCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCaga < 7:203182/139‑3 (MQ=255) tCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCaga > 1:81800/1‑137 (MQ=255) tCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCaga > 6:135143/1‑137 (MQ=255) tCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCa < 7:376015/137‑1 (MQ=255) aCAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCa > 5:384989/1‑139 (MQ=255) aCAGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCa > 8:294615/1‑139 (MQ=255) aGTTGAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCAtt > 7:359121/1‑139 (MQ=255) gAATCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCAtttt > 3:344569/1‑137 (MQ=255) aaTCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCAtttt > 1:150847/1‑136 (MQ=255) aTCAAGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGa < 8:121210/139‑1 (MQ=255) aGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTCGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTGCAGCCTCCATCATTTTTAGAAAAt > 2:143355/1‑139 (MQ=255) aGGCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAAt > 7:339511/1‑139 (MQ=255) gCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCtt > 1:228200/1‑123 (MQ=255) gCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCtt < 2:228200/123‑1 (MQ=255) gCCGAGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATc > 8:195157/1‑138 (MQ=255) aGGACGCCCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCTGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAgtt > 1:34129/1‑139 (MQ=255) aGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAgtt < 1:407310/139‑1 (MQ=255) aGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAgtt < 3:442632/139‑1 (MQ=255) aGGACGACCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAgtt < 7:114888/139‑1 (MQ=255) acCATTCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAgttttgttt > 1:243406/1‑139 (MQ=255) cATTGCAAGTGAATCAGCGACTAAAATGATGTCATCTCCCGCTTGTTCAGCAAGTTTTGCTGCCGGATAATCATAAGAGGTCAGCATGTCAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTc < 3:179200/139‑1 (MQ=255) cATTCCAAGTGACTCACCGACTAAACTCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTc < 6:181797/139‑1 (MQ=255) ttCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATTATCATAATCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCAt < 3:348644/139‑1 (MQ=255) ttCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCAt > 6:404802/1‑139 (MQ=255) ttCCAAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCAt > 8:272513/1‑139 (MQ=255) aGTGAATCACCGACTAAAATCATTTCAACTCCCGCTTGTTCAGCAAGTTTAGCTTCCGGAGAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATAATTAGAAAATCCAGTTTTTTTTACATgctg > 4:72592/1‑135 (MQ=255) aGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGtttt > 2:288103/1‑139 (MQ=255) gTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTtc < 6:384989/139‑1 (MQ=255) gTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTtc < 6:98821/139‑1 (MQ=255) aaTCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTtctc < 7:195157/138‑1 (MQ=255) aaTCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTtctc < 5:23278/138‑1 (MQ=255) aaTCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTctcc > 3:219208/1‑139 (MQ=255) aTCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTctcct > 4:216972/1‑139 (MQ=255) tCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAg > 4:86773/1‑71 (MQ=255) tCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAg < 3:86773/71‑1 (MQ=255) tCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTctcc < 4:81393/137‑1 (MQ=255) tCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTctcc > 3:81393/1‑137 (MQ=255) tCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGGCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTctcctc < 1:312644/139‑1 (MQ=255) aCCGACTAAAATCCTGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTctcctcct < 3:404433/139‑1 (MQ=255) aCCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTctcctcct < 2:391919/139‑1 (MQ=255) ccGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTctcctcctc < 8:58710/139‑1 (MQ=255) ccGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTctcctcctc < 3:216972/139‑1 (MQ=255) ccGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTctcctcctc < 4:344569/139‑1 (MQ=255) ccGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTctcctcctc < 5:135143/139‑1 (MQ=255) ccGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTctcctcctc < 7:12228/139‑1 (MQ=255) ccGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTctcctcctc < 2:243406/139‑1 (MQ=255) cGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGCCTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTCTCCTCCTCa > 7:40115/1‑139 (MQ=255) aaaTCATGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTCTCCTCCTCATGtt < 5:217183/137‑1 (MQ=255) aaTCATGTCAACTCCCTCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGATCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTCTCCTCCTCATGTTAag < 1:376102/139‑1 (MQ=255) tGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAAt < 3:103392/64‑1 (MQ=255) tGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAAt > 4:103392/1‑64 (MQ=255) tGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCgg > 1:206504/1‑67 (MQ=255) tGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCgg < 2:206504/67‑1 (MQ=255) tGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATc < 3:166302/97‑1 (MQ=255) tGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATc > 4:166302/1‑97 (MQ=255) tGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTCTCCTCCTCATGTTTagag > 7:207883/1‑136 (MQ=255) tGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTCTCCTCCTCATGTTTAgaggtg > 2:358564/1‑137 (MQ=255) tGTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTCTCCTCCTCATGTTTAgaggag < 2:53891/139‑1 (MQ=255) gTCAACTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTCTCCTCCTCATGTTTagag > 1:46289/1‑135 (MQ=255) gTCAACTCCCGCTTGTTCAGCAAGATTAGCTGCCGGATAATCATAAGCTGTCAGAATTACAATCGGTTCTTCAGACTCCTAACTTTTTAGAAAATCCAGTTTTGTATTCATCTTTTCTCCTCCTCATGTAAagag > 6:287427/1‑135 (MQ=255) aCTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCgg < 6:390882/62‑1 (MQ=255) aCTCCCGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCgg > 5:390882/1‑62 (MQ=255) cccGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTCTCCTCCTCATGTTTAGAGGAGATGATCTg < 1:275005/139‑1 (MQ=255) ccGCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTCTCCTCCTCATGTTTATAGGAGATGATCTGc > 7:312686/1‑139 (MQ=255) gCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTCTCCTCCTCATGTTTAGAGGAGATGATCTGCCg < 6:201438/139‑1 (MQ=255) gCTTGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTCTCCTCCTCATGTTTAGAGGAGATGATCTGCCg < 8:359121/139‑1 (MQ=255) tGTTCAGCAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTCTCCTCCTCATGTTTAGAGGAGATGATCTGCCGttt > 1:53540/1‑139 (MQ=255) tGTTCAGCAAGTTTAGCTGACGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTCTCCTCCTCATGTTTAGAGGAGATGATCTGCCGttt > 1:18863/1‑139 (MQ=255) cAAGTTTAGCTGCCGGATAATCATAAGCGGTCAGCATGACAATCGGTTCTTCAGACTCCTTCATTTTTAGAAAATCCAGTTTTGTTTTCATGTTTTCTCCTCCTCATGTTTAGAGGAGATGATCTGCCGTTTTCttctg > 6:222287/1‑136 (MQ=255) | GCCCCTTTTAACAGCTTTTGTATGATGGATCATGTCCGCAACTGTCACACCGACAGTTGAATCAAGGCCGAGGACGACCATTCCGAGTGAATCACCGACTAAAATCATGTCAACTCCCGCTTGTTCAGCAAGCTTAGCTGCCGGATAATCATAAGCGGTCAGCATCACAATCGGTTCTTCATTCTCCTTCATTTTTAGAAAATCGAGTTTTGTTTTCATGTTTTCTCCTCCTCATGTTTAGAGGAGATGAGCTGCCGTTTTCTTATA > CP006881/2172307‑2172573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |