| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,181,958 | C→T | G159G (GGG→GGA) | U712_10925 ← | Menaquinol‑cytochrome c reductase cytochrome b subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,181,958 | 0 | C | T | 98.7% | 229.0 / ‑4.9 | 76 | G159G (GGG→GGA) | U712_10925 | Menaquinol‑cytochrome c reductase cytochrome b subunit |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (38/37); total (39/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01 | |||||||||||
ATGCGGCAGGAAGAAAGAATACATGGATCGCAAAAAACCTAGTCAGCGTTTGGGCGCCTACAATATCAGGGTGCCCCGCAAGGAGTGTTTTGACTTGCGTCCCGATCAAAGGCGTGGCTTCAGCGATCTGCAGCCCGACTTTTGTTGCAAACAGAGCCTTCATGTCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGCCCGAGCATGACAAAAAAGATCAGTACACCGACAATCCAGTTCAGCTCGCGCGGCTTTTTATACG > CP006881/2181825‑2182085 | aTGCGGCAGGAAGAAAAAATACATGGATCGCAAAAAACCTAGTCAGCGTTTGGGCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGAc > 1:391875/1‑139 (MQ=255) tGCGGCAGGAAGAAAGAATACATGGATCGCAAAAAACCTAGTCAGCGTTTGGGCGCCTACAATATCAGGGTGCACCGCAAGGAGTGTTTTGACTTGCGTCCCGATCAAAGGCGTGGCTTCAGCGATCTGCAGCCCGACt > 6:254084/1‑139 (MQ=255) aGGAAGAAAAAATACATGGATCGCAAAAAACCTAGTCAGCGTTTGGGCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTttgtt < 1:94355/139‑1 (MQ=255) ggAAGAAAAAATACATGGATCGCAAAAAACCTAGTCAGCGTTTGGGCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTttgttg < 8:128301/139‑1 (MQ=255) aaaaaTACATGGATCGCAAAAAACCTAGTCAGCGTTTGGGCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACa < 8:410791/136‑1 (MQ=255) aaTACATGGATCGCAAAAAACCTAGTCCGCGTTTGGGCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACagag < 5:56977/139‑1 (MQ=255) aTCGCAAAAAACCTAGTCAGCGTTTGGGCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCCATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCAtat > 2:341532/1‑137 (MQ=255) aaaCCTAGTCAGCGTTTGGGCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGa < 7:76827/139‑1 (MQ=255) tCAGCGTTTGGGCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCGTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTa < 4:385146/139‑1 (MQ=255) aGCGTTTGGGCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGc < 4:381148/139‑1 (MQ=255) tttGGGCGCCTACAATCTCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGt < 5:32451/139‑1 (MQ=255) tttGGGCGCCTACAATATCCGGATGCCCTTCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGt < 2:141754/139‑1 (MQ=255) tttGGGCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAATCAAGTAGCCTGt < 4:217985/139‑1 (MQ=255) tttGGGCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGt < 6:333233/139‑1 (MQ=255) tttGGGCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGt < 2:416097/139‑1 (MQ=255) tttGGGCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTGTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGt < 1:341532/139‑1 (MQ=255) caggggCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGt < 1:405006/136‑1 (MQ=255) gggCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGt > 4:160072/1‑136 (MQ=255) gggCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGt < 3:160072/136‑1 (MQ=255) ggCGCCTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAaag > 4:105073/1‑139 (MQ=255) ccTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAaagccaa > 3:34132/1‑139 (MQ=255) ccTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAaagcc > 3:428567/1‑137 (MQ=255) ccTACAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAaagcc > 5:158221/1‑137 (MQ=255) cAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAaagccaaga < 1:184577/137‑2 (MQ=255) cAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGacc < 8:31012/139‑1 (MQ=255) atatCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGt < 3:283274/125‑1 (MQ=255) atatCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGt > 4:283274/1‑125 (MQ=255) tatCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGt > 8:287409/1‑124 (MQ=255) tatCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGt < 7:287409/124‑1 (MQ=255) cggatGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCGGACTGTTGTTGCAAACAGAGGCTTCAGATCCCATGGATGCAAGTCGCCTGTATAGCCATGACCGAGCaga > 2:389060/5‑137 (MQ=255) cggatGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCAt < 3:445629/134‑1 (MQ=255) gatGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACagag < 8:271782/85‑1 (MQ=255) gatGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACagag > 7:271782/3‑87 (MQ=255) atGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAAc > 6:280713/2‑138 (MQ=255) atGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAAc > 2:287788/2‑138 (MQ=255) atGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAAc > 3:331009/2‑138 (MQ=255) atGCCCTGCAAGGAGATTTTAAACTTGCGTTCCGAAAAAAGCAGTGGCTTCGGCGATCTGCAGTACGACTTTTGTTGCAAACAGAGCCTTCATATCACAAGGAAGCAAGTAGCCTGTAAAGACAAGACCTAGCATAAc > 7:45134/2‑138 (MQ=255) cgCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAg < 7:97539/130‑1 (MQ=255) agCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAg > 8:97539/2‑131 (MQ=255) ccctGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACaaa > 3:416215/1‑138 (MQ=255) ccctGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACaaa > 6:92901/1‑138 (MQ=255) cAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGCCCGAGCATAACaaaa > 4:31929/1‑134 (MQ=255) acgAGCGTTTTAACTTGATTTCAGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAAAAGAGCCTTCATATCACAAGGAAGCAAGTAGCCTGTAAAGCAAAGACAGAGCATAACAAAAAAGCTCa > 8:98031/3‑139 (MQ=255) agcgtTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAATCCAAGACCGAGCATAACAAAAAAGATCAgca > 8:394523/4‑137 (MQ=255) cgtTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCTACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGAAAAGCCAAGACCGAGCATAACAAAAAAGATCAGcaca > 5:27674/2‑139 (MQ=255) cgtTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGcaca > 1:297778/2‑139 (MQ=255) cgtTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCac < 7:175446/137‑1 (MQ=255) taaCTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGa < 5:112663/136‑1 (MQ=255) taaCTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGa < 4:34132/136‑1 (MQ=255) taaCTTGCGTTCCGAGCAAAGGCGGGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGa < 2:126024/136‑1 (MQ=255) cTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAAt < 1:205034/139‑1 (MQ=255) cGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACa < 2:245963/56‑1 (MQ=255) cGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACa > 1:245963/1‑56 (MQ=255) cGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAAt < 7:222790/135‑1 (MQ=255) cGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAAt > 8:222790/1‑135 (MQ=255) cGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAg > 5:337123/1‑139 (MQ=255) cGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGAATAACAAAAAAGATCAGCACACCGACAATCCAg > 1:291754/1‑139 (MQ=255) cGTTCCGATCAAAGGCGTCGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATACCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAg > 7:144460/1‑139 (MQ=255) gttccGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGt > 5:115781/4‑139 (MQ=255) aTCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCt > 1:268589/1‑139 (MQ=255) aaGGCGTGGCTGCGGCTATCTGCAGTCCTACTTTTGTTGCAAACAGATCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTcgcg < 2:291754/139‑1 (MQ=255) aGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTAGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTcgcgc < 3:172371/139‑1 (MQ=255) tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAg < 2:68892/57‑1 (MQ=255) tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAg > 1:68892/1‑57 (MQ=255) tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGt > 7:342769/1‑73 (MQ=255) tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGt < 8:342769/73‑1 (MQ=255) tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGttt > 5:206196/1‑139 (MQ=255) tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGttt > 2:111950/1‑139 (MQ=255) tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGttt > 5:48002/1‑139 (MQ=255) tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGttt > 7:390949/1‑139 (MQ=255) tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGttt > 5:117808/1‑139 (MQ=255) gCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACg < 8:390949/139‑1 (MQ=255) gCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACg < 5:280713/139‑1 (MQ=255) gCGATCTGCAGTCCGACGTTTGTTGCATACAGAGCCTTAATATAGCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACg < 1:291888/139‑1 (MQ=255) tCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACg < 1:296234/135‑1 (MQ=255) tCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACg > 2:296234/1‑135 (MQ=255) | ATGCGGCAGGAAGAAAGAATACATGGATCGCAAAAAACCTAGTCAGCGTTTGGGCGCCTACAATATCAGGGTGCCCCGCAAGGAGTGTTTTGACTTGCGTCCCGATCAAAGGCGTGGCTTCAGCGATCTGCAGCCCGACTTTTGTTGCAAACAGAGCCTTCATGTCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGCCCGAGCATGACAAAAAAGATCAGTACACCGACAATCCAGTTCAGCTCGCGCGGCTTTTTATACG > CP006881/2181825‑2182085 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |