| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,182,021 | C→A | G138G (GGG→GGT) | U712_10925 ← | Menaquinol‑cytochrome c reductase cytochrome b subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,182,021 | 0 | C | A | 98.8% | 251.3 / NA | 85 | G138G (GGG→GGT) | U712_10925 | Menaquinol‑cytochrome c reductase cytochrome b subunit |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (48/36); total (49/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAATATCAGGGTGCCCCGCAAGGAGTGTTTTGACTTGCGTCCCGATCAAAGGCGTGGCTTCAGCGATCTGCAGCCCGACTTTTGTTGCAAACAGAGCCTTCATGTCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGCCCGAGCATGACAAAAAAGATCAGTACACCGACAATCCAGTTCAGCTCGCGCGGCTTTTTATACGCCCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGCA > CP006881/2181885‑2182157 | cAATATCCGGATGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGacc < 8:31012/139‑1 (MQ=255) cggatGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCGGACTGTTGTTGCAAACAGAGGCTTCAGATCCCATGGATGCAAGTCGCCTGTATAGCCATGACCGAGCaga > 2:389060/5‑137 (MQ=255) cggatGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCAt < 3:445629/134‑1 (MQ=255) atGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAAc > 6:280713/2‑138 (MQ=255) atGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAAc > 2:287788/2‑138 (MQ=255) atGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAAc > 3:331009/2‑138 (MQ=255) atGCCCTGCAAGGAGATTTTAAACTTGCGTTCCGAAAAAAGCAGTGGCTTCGGCGATCTGCAGTACGACTTTTGTTGCAAACAGAGCCTTCATATCACAAGGAAGCAAGTAGCCTGTAAAGACAAGACCTAGCATAAc > 7:45134/2‑138 (MQ=255) cgCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAg < 7:97539/130‑1 (MQ=255) agCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAg > 8:97539/2‑131 (MQ=255) ccctGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACaaa > 6:92901/1‑138 (MQ=255) ccctGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACaaa > 3:416215/1‑138 (MQ=255) cAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGCCCGAGCATAACaaaa > 4:31929/1‑134 (MQ=255) acgAGCGTTTTAACTTGATTTCAGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAAAAGAGCCTTCATATCACAAGGAAGCAAGTAGCCTGTAAAGCAAAGACAGAGCATAACAAAAAAGCTCa > 8:98031/3‑139 (MQ=255) agcgtTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAATCCAAGACCGAGCATAACAAAAAAGATCAgca > 8:394523/4‑137 (MQ=255) cgtTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCTACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGAAAAGCCAAGACCGAGCATAACAAAAAAGATCAGcaca > 5:27674/2‑139 (MQ=255) cgtTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGcaca > 1:297778/2‑139 (MQ=255) cgtTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCac < 7:175446/137‑1 (MQ=255) taaCTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGa < 4:34132/136‑1 (MQ=255) taaCTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGa < 5:112663/136‑1 (MQ=255) taaCTTGCGTTCCGAGCAAAGGCGGGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGa < 2:126024/136‑1 (MQ=255) cTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAAt < 1:205034/139‑1 (MQ=255) cGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAAt < 7:222790/135‑1 (MQ=255) cGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAAt > 8:222790/1‑135 (MQ=255) cGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAg > 5:337123/1‑139 (MQ=255) cGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGAATAACAAAAAAGATCAGCACACCGACAATCCAg > 1:291754/1‑139 (MQ=255) cGTTCCGATCAAAGGCGTCGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATACCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAg > 7:144460/1‑139 (MQ=255) gttccGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGt > 5:115781/4‑139 (MQ=255) aTCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCt > 1:268589/1‑139 (MQ=255) aaGGCGTGGCTGCGGCTATCTGCAGTCCTACTTTTGTTGCAAACAGATCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTcgcg < 2:291754/139‑1 (MQ=255) aGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTAGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTcgcgc < 3:172371/139‑1 (MQ=255) tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGttt > 5:48002/1‑139 (MQ=255) tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGttt > 5:206196/1‑139 (MQ=255) tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGttt > 5:117808/1‑139 (MQ=255) tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGttt > 2:111950/1‑139 (MQ=255) tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGttt > 7:390949/1‑139 (MQ=255) gCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACg < 8:390949/139‑1 (MQ=255) gCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACg < 5:280713/139‑1 (MQ=255) gCGATCTGCAGTCCGACGTTTGTTGCATACAGAGCCTTAATATAGCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACg < 1:291888/139‑1 (MQ=255) tCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACg < 1:296234/135‑1 (MQ=255) tCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACg > 2:296234/1‑135 (MQ=255) tccGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGaaa < 4:331009/138‑1 (MQ=255) cGACTTTTGTTGCAAACAGAGCCTTCATATCCCAATGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGaaaaa < 1:389060/139‑1 (MQ=255) cGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCGGTAAAGCCAAGACCGCGCATAACAAAACAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGaaaac > 6:54308/1‑138 (MQ=255) cGACTTTTGTAGCAAACAGAGCCTACATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGATCAGCTCGCGCGGTTTTTTATACGCGCCTTGGaaaaa < 5:20722/139‑1 (MQ=255) cTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGAc > 1:195179/1‑139 (MQ=255) tgttgCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCt < 1:287788/138‑1 (MQ=255) cAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCg > 6:198253/1‑138 (MQ=255) cAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCg < 1:274586/138‑1 (MQ=255) cAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCg < 7:115332/138‑1 (MQ=255) agCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTaaa < 4:428567/139‑1 (MQ=255) agCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTaaa < 4:416215/139‑1 (MQ=255) agCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTaa > 8:434404/1‑138 (MQ=255) agCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTaa > 1:59413/1‑138 (MQ=255) tCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTcgcg > 2:170689/1‑88 (MQ=255) tCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTcgcg < 1:170689/88‑1 (MQ=255) cATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTGTTTTATACGCGCGTTGGAAAAAGACCCGAAGCGTATGTAAAAAcat > 2:279471/1‑138 (MQ=255) atatCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAAcatc < 7:394523/135‑1 (MQ=255) ccAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATcaca < 6:337123/139‑1 (MQ=255) ccAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATcaca < 2:195179/139‑1 (MQ=255) aaGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAAt > 4:258937/1‑139 (MQ=255) ggAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGa > 2:60983/1‑139 (MQ=255) ggAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGa > 2:54305/1‑139 (MQ=255) aGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGa > 2:227772/1‑55 (MQ=255) aGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGa < 1:227772/55‑1 (MQ=255) cAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAATACCCTCAGCGTATGTAAAAACATCATCACAATGACCAgg > 2:401211/1‑139 (MQ=255) cAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATcaca > 4:436526/1‑130 (MQ=255) cAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATcaca < 3:436526/130‑1 (MQ=255) aaGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTGTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGc > 4:256149/1‑139 (MQ=255) gCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCTCACCGACAATCCAGTTCAGCTCGCTCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCTTATGTAAAAACATCATCACAATGACCAGGCTCGCa < 8:144460/139‑1 (MQ=255) gCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCa < 3:105073/139‑1 (MQ=255) gCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCa > 5:378051/1‑139 (MQ=255) ccTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCAc > 2:30635/1‑139 (MQ=255) ccTGTAAACCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCAc < 2:297778/139‑1 (MQ=255) tGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCa < 4:27699/98‑1 (MQ=255) tGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCa > 1:321077/1‑98 (MQ=255) tGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCa < 2:321077/98‑1 (MQ=255) tGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCa > 3:27699/1‑98 (MQ=255) tGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCAccc > 8:439024/1‑139 (MQ=255) gTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCAccc > 3:86762/1‑138 (MQ=255) tAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGCCCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCAccc > 4:53710/1‑137 (MQ=255) tAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTa > 4:54016/1‑105 (MQ=255) tAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTa < 3:54016/105‑1 (MQ=255) tAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCAccc > 8:81114/1‑137 (MQ=255) tAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCAccc > 3:104970/1‑137 (MQ=255) tAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCa < 1:111950/139‑1 (MQ=255) tAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCa < 7:434404/139‑1 (MQ=255) aagccaagtcCGAGCTTAAGAAAAAAGCTCAGGACACCGACTCTCGACTTCAGCTCGGGCTGTTTTTTATACGCGGCTTTGAAAAAGACCCTCTGCGTATGTAATAAAATCATCACAATGACCAGGCTTTCACCCCAgt < 8:45134/139‑1 (MQ=255) aagccaagacCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCg < 1:110236/130‑1 (MQ=255) aagccaagacCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCg > 2:110236/1‑130 (MQ=255) aagccaagacCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAgt < 1:30635/139‑1 (MQ=255) agccaagccCGAGCATGACAAAAAAGATCAGTACACCGACAATCCATTTCAGCTCGCGCGGCTTTTTATACGCCCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAgtg < 5:254084/139‑1 (MQ=255) agccaagacCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAgtg > 4:405477/1‑139 (MQ=255) ccaagacCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCg > 8:203792/1‑94 (MQ=255) ccaagacCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCg < 7:203792/94‑1 (MQ=255) aagacCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAgtggtg > 6:323503/1‑138 (MQ=255) aagacCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGc < 3:31929/139‑1 (MQ=255) agccCGAGCAAAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGAGTTGGCAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGCa > 2:398348/1‑139 (MQ=255) | CAATATCAGGGTGCCCCGCAAGGAGTGTTTTGACTTGCGTCCCGATCAAAGGCGTGGCTTCAGCGATCTGCAGCCCGACTTTTGTTGCAAACAGAGCCTTCATGTCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGCCCGAGCATGACAAAAAAGATCAGTACACCGACAATCCAGTTCAGCTCGCGCGGCTTTTTATACGCCCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGCA > CP006881/2181885‑2182157 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |