Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,182,030 G→A V135V (GTC→GTT)  U712_10925 ← Menaquinol‑cytochrome c reductase cytochrome b subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,182,0300GA99.1% 340.0 / ‑4.8 109V135V (GTC→GTT) U712_10925Menaquinol‑cytochrome c reductase cytochrome b subunit
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base A (64/44);  total (64/45)
Fisher's exact test for biased strand distribution p-value = 4.13e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.92e-01

Only 100 of 109 total aligned reads displayed.

GTGCCCCGCAAGGAGTGTTTTGACTTGCGTCCCGATCAAAGGCGTGGCTTCAGCGATCTGCAGCCCGACTTTTGTTGCAAACAGAGCCTTCATGTCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGCCCGAGCATGACAAAAAAGATCAGTACACCGACAATCCAGTTCAGCTCGCGCGGCTTTTTATACGCCCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGCATTCCCCT  >  CP006881/2181895‑2182164
                                                                                                                                       |                                                                                                                                      
atGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAAc                                                                                                                                      >  2:287788/2‑138 (MQ=255)
atGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAAc                                                                                                                                      >  6:280713/2‑138 (MQ=255)
atGCCCTGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAAc                                                                                                                                      >  3:331009/2‑138 (MQ=255)
atGCCCTGCAAGGAGATTTTAAACTTGCGTTCCGAAAAAAGCAGTGGCTTCGGCGATCTGCAGTACGACTTTTGTTGCAAACAGAGCCTTCATATCACAAGGAAGCAAGTAGCCTGTAAAGACAAGACCTAGCATAAc                                                                                                                                      >  7:45134/2‑138 (MQ=255)
   ccctGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACaaa                                                                                                                                   >  3:416215/1‑138 (MQ=255)
   ccctGCAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACaaa                                                                                                                                   >  6:92901/1‑138 (MQ=255)
        cAAGGAGCGTTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGCCCGAGCATAACaaaa                                                                                                                                  >  4:31929/1‑134 (MQ=255)
             agcgtTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAATCCAAGACCGAGCATAACAAAAAAGATCAgca                                                                                                                        >  8:394523/4‑137 (MQ=255)
               cgtTTTAACTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCac                                                                                                                       <  7:175446/137‑1 (MQ=255)
                    taaCTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGa                                                                                                                  <  4:34132/136‑1 (MQ=255)
                    taaCTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGa                                                                                                                  <  5:112663/136‑1 (MQ=255)
                    taaCTTGCGTTCCGAGCAAAGGCGGGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGa                                                                                                                  <  2:126024/136‑1 (MQ=255)
                       cTTGCGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAAt                                                                                                              <  1:205034/139‑1 (MQ=255)
                           cGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAAt                                                                                                              <  7:222790/135‑1 (MQ=255)
                           cGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAAt                                                                                                              >  8:222790/1‑135 (MQ=255)
                           cGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAg                                                                                                          >  5:337123/1‑139 (MQ=255)
                           cGTTCCGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGAATAACAAAAAAGATCAGCACACCGACAATCCAg                                                                                                          >  1:291754/1‑139 (MQ=255)
                           cGTTCCGATCAAAGGCGTCGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATACCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAg                                                                                                          >  7:144460/1‑139 (MQ=255)
                            gttccGATCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGt                                                                                                         >  5:115781/4‑139 (MQ=255)
                                  aTCAAAGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCt                                                                                                   >  1:268589/1‑139 (MQ=255)
                                      aaGGCGTGGCTGCGGCTATCTGCAGTCCTACTTTTGTTGCAAACAGATCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTcgcg                                                                                               <  2:291754/139‑1 (MQ=255)
                                       aGGCGTGGCTTCGGCGATCTGCAGTCCGACTTTTGTAGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTcgcgc                                                                                              <  3:172371/139‑1 (MQ=255)
                                            tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGttt                                                                                         >  5:117808/1‑139 (MQ=255)
                                            tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGttt                                                                                         >  7:390949/1‑139 (MQ=255)
                                            tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGttt                                                                                         >  5:206196/1‑139 (MQ=255)
                                            tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGttt                                                                                         >  5:48002/1‑139 (MQ=255)
                                            tGGCTTCGGCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGttt                                                                                         >  2:111950/1‑139 (MQ=255)
                                                    gCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACg                                                                                 <  8:390949/139‑1 (MQ=255)
                                                    gCGATCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACg                                                                                 <  5:280713/139‑1 (MQ=255)
                                                    gCGATCTGCAGTCCGACGTTTGTTGCATACAGAGCCTTAATATAGCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACg                                                                                 <  1:291888/139‑1 (MQ=255)
                                                        tCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACg                                                                                 >  2:296234/1‑135 (MQ=255)
                                                        tCTGCAGTCCGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACg                                                                                 <  1:296234/135‑1 (MQ=255)
                                                               tccGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGaaa                                                                      <  4:331009/138‑1 (MQ=255)
                                                                 cGACTTTTGTTGCAAACAGAGCCTTCATATCCCAATGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGaaaaa                                                                    <  1:389060/139‑1 (MQ=255)
                                                                 cGACTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCGGTAAAGCCAAGACCGCGCATAACAAAACAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGaaaac                                                                    >  6:54308/1‑138 (MQ=255)
                                                                 cGACTTTTGTAGCAAACAGAGCCTACATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGATCAGCTCGCGCGGTTTTTTATACGCGCCTTGGaaaaa                                                                    <  5:20722/139‑1 (MQ=255)
                                                                    cTTTTGTTGCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGAc                                                                 >  1:195179/1‑139 (MQ=255)
                                                                        tgttgCAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCt                                                              <  1:287788/138‑1 (MQ=255)
                                                                             cAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCg                                                         <  7:115332/138‑1 (MQ=255)
                                                                             cAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCg                                                         >  6:198253/1‑138 (MQ=255)
                                                                             cAAACAGAGCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCg                                                         <  1:274586/138‑1 (MQ=255)
                                                                                    agCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTaaa                                                 <  4:416215/139‑1 (MQ=255)
                                                                                    agCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTaa                                                  >  8:434404/1‑138 (MQ=255)
                                                                                    agCCTTCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTaa                                                  >  1:59413/1‑138 (MQ=255)
                                                                                         tCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTcgcg                                                                                               >  2:170689/1‑88 (MQ=255)
                                                                                         tCATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTcgcg                                                                                               <  1:170689/88‑1 (MQ=255)
                                                                                          cATATCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTGTTTTATACGCGCGTTGGAAAAAGACCCGAAGCGTATGTAAAAAcat                                            >  2:279471/1‑138 (MQ=255)
                                                                                                ccAAGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATcaca                                     <  6:337123/139‑1 (MQ=255)
                                                                                                  aaGGAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAAt                                   >  4:258937/1‑139 (MQ=255)
                                                                                                    ggAAGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGa                                 >  2:60983/1‑139 (MQ=255)
                                                                                                       aGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGa                                                                                                                  <  1:227772/55‑1 (MQ=255)
                                                                                                       aGCAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGa                                                                                                                  >  2:227772/1‑55 (MQ=255)
                                                                                                         cAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAATACCCTCAGCGTATGTAAAAACATCATCACAATGACCAgg                            >  2:401211/1‑139 (MQ=255)
                                                                                                         cAAGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATcaca                                     >  4:436526/1‑130 (MQ=255)
                                                                                                          aaGTAGCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTGTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGc                           >  4:256149/1‑139 (MQ=255)
                                                                                                               gCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCTCACCGACAATCCAGTTCAGCTCGCTCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCTTATGTAAAAACATCATCACAATGACCAGGCTCGCa                      <  8:144460/139‑1 (MQ=255)
                                                                                                               gCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCa                      >  5:378051/1‑139 (MQ=255)
                                                                                                               gCCTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCa                      <  3:105073/139‑1 (MQ=255)
                                                                                                                ccTGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCAc                     >  2:30635/1‑139 (MQ=255)
                                                                                                                ccTGTAAACCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCAc                     <  2:297778/139‑1 (MQ=255)
                                                                                                                  tGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCa                                                            <  4:27699/98‑1 (MQ=255)
                                                                                                                  tGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCa                                                            >  3:27699/1‑98 (MQ=255)
                                                                                                                  tGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCa                                                            <  2:321077/98‑1 (MQ=255)
                                                                                                                  tGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCa                                                            >  1:321077/1‑98 (MQ=255)
                                                                                                                  tGTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCAccc                   >  8:439024/1‑139 (MQ=255)
                                                                                                                   gTAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCAccc                   >  3:86762/1‑138 (MQ=255)
                                                                                                                    tAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGCCCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCAccc                   >  4:53710/1‑137 (MQ=255)
                                                                                                                    tAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTa                                                   >  4:54016/1‑105 (MQ=255)
                                                                                                                    tAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTa                                                   <  3:54016/105‑1 (MQ=255)
                                                                                                                    tAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCAccc                   >  8:81114/1‑137 (MQ=255)
                                                                                                                    tAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCAccc                   >  3:104970/1‑137 (MQ=255)
                                                                                                                    tAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCa                 <  1:111950/139‑1 (MQ=255)
                                                                                                                    tAAAGCCAAGACCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCa                 <  7:434404/139‑1 (MQ=255)
                                                                                                                      aagccaagtcCGAGCTTAAGAAAAAAGCTCAGGACACCGACTCTCGACTTCAGCTCGGGCTGTTTTTTATACGCGGCTTTGAAAAAGACCCTCTGCGTATGTAATAAAATCATCACAATGACCAGGCTTTCACCCCAgt               <  8:45134/139‑1 (MQ=255)
                                                                                                                      aagccaagacCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCg                        <  1:110236/130‑1 (MQ=255)
                                                                                                                      aagccaagacCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCg                        >  2:110236/1‑130 (MQ=255)
                                                                                                                      aagccaagacCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAgt               <  1:30635/139‑1 (MQ=255)
                                                                                                                       agccaagccCGAGCATGACAAAAAAGATCAGTACACCGACAATCCATTTCAGCTCGCGCGGCTTTTTATACGCCCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAgtg              <  5:254084/139‑1 (MQ=255)
                                                                                                                       agccaagacCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAgtg              >  4:405477/1‑139 (MQ=255)
                                                                                                                         ccaagacCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCg                                                         >  8:203792/1‑94 (MQ=255)
                                                                                                                         ccaagacCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCg                                                         <  7:203792/94‑1 (MQ=255)
                                                                                                                           aagacCGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGc          <  3:31929/139‑1 (MQ=255)
                                                                                                                            agccCGAGCAAAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGAGTTGGCAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGCa         >  2:398348/1‑139 (MQ=255)
                                                                                                                            agaccGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAgtggtg           >  1:416653/4‑137 (MQ=255)
                                                                                                                            agaccGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGCa         <  5:92901/136‑1 (MQ=255)
                                                                                                                             gaccGAGCATAACAAAAAAGATCAGCTCACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGc          <  2:416653/135‑1 (MQ=255)
                                                                                                                             gaccGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGCAt        <  4:86762/137‑1 (MQ=255)
                                                                                                                              accGAGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGTCTCGCACCCCAGTGGTGCAtc       >  2:158049/2‑138 (MQ=255)
                                                                                                                                  aGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCt                                                                            <  1:60355/66‑1 (MQ=255)
                                                                                                                                  aGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCt                                                                            >  2:60355/1‑66 (MQ=255)
                                                                                                                                  aGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGaaa                                                                      >  5:401523/1‑72 (MQ=255)
                                                                                                                                  aGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGaaa                                                                      <  6:401523/72‑1 (MQ=255)
                                                                                                                                  aGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAGAAACATCATAACAATGACCAGGCTCGCACCCCAGTGTTGCATCcccc   >  6:83148/1‑139 (MQ=255)
                                                                                                                                  aGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGCATCcccc   >  3:118730/1‑139 (MQ=255)
                                                                                                                                  aGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGCATCcccc   >  6:13665/1‑139 (MQ=255)
                                                                                                                                  aGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGCATCcccc   >  3:74529/1‑139 (MQ=255)
                                                                                                                                  aGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGCATCcccc   >  6:321665/1‑139 (MQ=255)
                                                                                                                                  aGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGCATCcccc   >  6:290581/1‑139 (MQ=255)
                                                                                                                                  aGCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACACTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGCATCcccc   >  4:76314/1‑139 (MQ=255)
                                                                                                                                   gCATAACAAAAAAGATCAGCACACCGACAATCCAGTTCAGCTCGCGCGGTTTTTTATACGCGCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGCATCCCCCt  >  3:36637/1‑139 (MQ=255)
                                                                                                                                       |                                                                                                                                      
GTGCCCCGCAAGGAGTGTTTTGACTTGCGTCCCGATCAAAGGCGTGGCTTCAGCGATCTGCAGCCCGACTTTTGTTGCAAACAGAGCCTTCATGTCCCAAGGAAGCAAGTAGCCTGTAAAGCCAAGCCCGAGCATGACAAAAAAGATCAGTACACCGACAATCCAGTTCAGCTCGCGCGGCTTTTTATACGCCCCTTGGAAAAAGACCCTCAGCGTATGTAAAAACATCATCACAATGACCAGGCTCGCACCCCAGTGGTGCATTCCCCT  >  CP006881/2181895‑2182164

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑