Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | CP006881 | 2,182,408 | A→T | V9V (GTT→GTA) | U712_10925 ← | Menaquinol‑cytochrome c reductase cytochrome b subunit |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP006881 | 2,182,408 | 0 | A | T | 100.0% | 216.8 / NA | 69 | V9V (GTT→GTA) | U712_10925 | Menaquinol‑cytochrome c reductase cytochrome b subunit |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (38/31); total (38/31) |
GGATAACGGTTACAAAAAACGTCAGTCCCCCAAAGCAATACACGAACGCAGAGAAATGATGGGCGGGATTTACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCATCAACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGAAAGCGGCGGCGTGCCCGGGACATT > CP006881/2182272‑2182540 | ggATAACGGTTACAAAAAACGTCAGTCCCCCAAAGCAATACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTAc > 5:281085/1‑139 (MQ=255) ggATAACGGTTACAAAAAACGTCAGTCCCCAAAAGCAATACACAAACGCAGAGAAGTGATGGGAGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGTTGTAATATCAAGCCGCTCGTCTAc > 2:249792/1‑139 (MQ=255) gATAACGGTTACAAAAAACGTCAGTCCCCCAAAGCAATACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTAcc > 8:407588/1‑139 (MQ=255) gATAACGGTTACAAAAAACGTCAGTCCCCCAAAGCAATACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTAcc < 1:23865/139‑1 (MQ=255) tAACGGTTACAAAAAACGTCAGTCCCCCAAAGCAATACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTAcc > 4:192122/1‑137 (MQ=255) cGGTTACAAAAAACGTCAGTCCCCCAAAGCAATACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGt > 5:188935/1‑138 (MQ=255) aCGTCAGTCCCCCAAAGCAATACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGtt < 2:396850/139‑1 (MQ=255) aGTCCCCCAAAGCAATACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCa < 7:407588/139‑1 (MQ=255) cccAAAGCAATACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCa < 6:145611/139‑1 (MQ=255) aGCAATACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCtt < 3:405787/139‑1 (MQ=255) aGCAATACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCtt < 6:188935/139‑1 (MQ=255) aGCAATACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCtt < 5:278325/139‑1 (MQ=255) aGCAATACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCtt < 5:166200/139‑1 (MQ=255) aGCAATACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCtt < 3:334531/139‑1 (MQ=255) aGCAATACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCtt < 1:332206/139‑1 (MQ=255) aTACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCtt > 7:327578/1‑135 (MQ=255) aTACACAAACGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCtt < 8:327578/135‑1 (MQ=255) taaCGCAGAGAAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAgg > 1:283038/2‑139 (MQ=255) gagaAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCtt > 6:59687/1‑122 (MQ=255) gagaAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCtt < 5:59687/122‑1 (MQ=255) agaAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCa > 5:256168/1‑111 (MQ=255) agaAATGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCa < 6:256168/111‑1 (MQ=255) aaTGATGGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTc < 2:283038/139‑1 (MQ=255) tgatgGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCa < 1:249792/139‑1 (MQ=255) tgatgGGCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCa < 8:391959/139‑1 (MQ=255) ggCGGGATTCACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGAt > 4:333886/1‑138 (MQ=255) ttcaCATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGagg < 5:349168/136‑3 (MQ=255) aCATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGcc < 3:192122/138‑1 (MQ=255) aCATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGcc < 3:333886/138‑1 (MQ=255) ttCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTAcc > 8:133218/1‑64 (MQ=255) ttCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTAcc < 7:133218/64‑1 (MQ=255) ttCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCtt < 5:90130/96‑1 (MQ=255) ttCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCtt > 6:90130/1‑96 (MQ=255) ttCCGGTACTTCGTGATCGGCAATATCACTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTATCCAAGATACAGCAAGCCGACttt > 3:142402/1‑139 (MQ=255) ccGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTa > 6:347960/1‑139 (MQ=255) ccGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGAATGTCACCCTTCCCCCTTAGGCTGTGCTTTTCCAATATACAGGAATCCGGCtttt > 3:34462/1‑138 (MQ=255) gTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTActt < 3:267591/139‑1 (MQ=255) gTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTAct > 4:384150/1‑138 (MQ=255) gTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTAct > 3:390877/1‑138 (MQ=255) ttCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAAtt > 2:376678/1‑67 (MQ=255) ttCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAAtt < 1:376678/67‑1 (MQ=255) cGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCCCCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCt > 7:200025/1‑139 (MQ=255) cGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAg > 4:52578/1‑120 (MQ=255) cGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAg < 3:52578/120‑1 (MQ=255) cGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTGTTTTACTTCTTggt > 3:280061/1‑137 (MQ=255) cGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCt > 1:107110/1‑139 (MQ=255) tCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATaa < 2:247269/139‑1 (MQ=255) tatCCCTCCACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGACTTTTACTTCTTGCTCATAATGATc > 1:164341/1‑137 (MQ=255) ccACATCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCGTAGGCTTTGCTTTTCCAAGAAACAGGAAGCCGGGTTGTACTTCTTGCTCATAAAGATAAAGAGGCgc > 6:9210/1‑138 (MQ=255) cacaTCGGTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCgc > 2:339427/1‑137 (MQ=255) ggTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATAAAGAGGCGCAAgcggc > 8:255825/1‑139 (MQ=255) gtgtAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCGGATTATGATCAAGAGGCGCAAgcggcg > 4:56918/1‑139 (MQ=255) tgtAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGcc > 1:92475/1‑94 (MQ=255) tgtAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGcc < 2:92475/94‑1 (MQ=255) tCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGcc < 4:89213/138‑1 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCtt > 1:430044/1‑47 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCtt < 2:430044/47‑1 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCa < 3:41215/70‑1 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCa > 4:41215/1‑70 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACATGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAgg > 4:334786/1‑138 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAg > 1:37952/1‑82 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAg < 2:37952/82‑1 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGcc < 4:105884/135‑1 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGcc > 3:105884/1‑135 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAggg > 5:434927/1‑139 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAggg > 3:308450/1‑139 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAggg > 1:129378/1‑139 (MQ=255) ccGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGa > 1:153421/1‑138 (MQ=255) cTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGAAACAGGAAGCCGTCGTTTACTTATAGCGCAAAATGATAAAGAGGCGCCAGCGGCCGGGTGGGCgggggcaa > 6:447774/1‑134 (MQ=255) | GGATAACGGTTACAAAAAACGTCAGTCCCCCAAAGCAATACACGAACGCAGAGAAATGATGGGCGGGATTTACATGTTCCGGTACTTCGTGATCGGCAATATCCCTCCACATCGGTGTAATATCAAGCCGCTCATCAACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGAAAGCGGCGGCGTGCCCGGGACATT > CP006881/2182272‑2182540 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |