| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,182,516 | A→C | S142A (TCG→GCG) | U712_10930 ← | Menaquinol‑cytochrome c reductase iron‑sulfur subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,182,516 | 0 | A | C | 99.0% | 318.4 / NA | 97 | S142A (TCG→GCG) | U712_10930 | Menaquinol‑cytochrome c reductase iron‑sulfur subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base C (55/41); total (55/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.33e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTGTAATATCAAGCCGCTCATCAACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGAAAGCGGCGGCGTGCCCGGGACATTGGTGCCGTCCTTTTCATAGAGTCCATAATGGCATGGACAAAAGAATTTATTCGGATTTTTAGGATCGCTATTCCAGTTCACCGTACACCCTAAATGCTTACAAATTGGCGA > CP006881/2182385‑2182651 | ggTGTAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATAAAGAGGCGCAAgcggc > 8:255825/1‑139 (MQ=255) gtgtAATATCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCGGATTATGATCAAGAGGCGCAAgcggcg > 4:56918/1‑139 (MQ=255) tCAAGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGcc < 4:89213/138‑1 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACATGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAgg > 4:334786/1‑138 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGcc < 4:105884/135‑1 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGcc > 3:105884/1‑135 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAggg > 1:129378/1‑139 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAggg > 5:434927/1‑139 (MQ=255) aGCCGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAggg > 3:308450/1‑139 (MQ=255) ccGCTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGa > 1:153421/1‑138 (MQ=255) cTCGTCTACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGAAACAGGAAGCCGTCGTTTACTTATAGCGCAAAATGATAAAGAGGCGCCAGCGGCCGGGTGGGCgggggcaa > 6:447774/1‑134 (MQ=255) cgtctaCCCAGTCATAAATTTTGTTCAGCATGTCACACTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCAGTCTTTTACTTCTTGCTCATAATTATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTgg > 5:308033/6‑139 (MQ=255) taCCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCGAATAATTATAAAGAGGCGCAAGCGGCGGCGGGCCAGGGCCCTTGGTggc > 7:157316/2‑137 (MQ=255) cccAGTCATAAATTTTGTTCAGCATGTCCCCCTTCCCCCGTCGGCTTTGCTTTTGCAAGCTTCAGGAAGCCGTCGTTTACTTCTTGCTCATATTGCTCCAGAGGCGCAAGCGGCGGCGTGCCAGGGACCTTGGGGCCGt > 6:72563/1‑139 (MQ=255) cAGTCATAAATTTTGTTCCGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTcc < 4:399429/139‑1 (MQ=255) cAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCATGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTcc < 6:129353/139‑1 (MQ=255) cAGTCATAAATTTTGTTCAGCATGGCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGACGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTcc < 8:105037/139‑1 (MQ=255) cAGTAATAAATTTTGTTCATCATGTCACCCTTCCCCCTTAGGCTGTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTcc < 4:280061/139‑1 (MQ=255) gTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCGTTGCTTTTCCAAGATCCAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCACGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCtt < 2:215507/139‑1 (MQ=255) tCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCttt > 5:215039/1‑139 (MQ=255) tCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCtt < 6:25977/138‑1 (MQ=255) tCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCtt > 5:25977/1‑138 (MQ=255) aTAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCtttt < 4:390877/138‑1 (MQ=255) aaTTTTTTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGATTTTCAAAGATCCAGCAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATa < 4:34462/139‑1 (MQ=255) ttttGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATaga < 7:255825/139‑1 (MQ=255) ttttGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATaga < 6:24119/139‑1 (MQ=255) tGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCa < 1:25305/132‑1 (MQ=255) tGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCa > 2:25305/1‑132 (MQ=255) tGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTc > 7:34498/1‑139 (MQ=255) tGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTc > 7:231821/1‑139 (MQ=255) tGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTc > 4:316318/1‑139 (MQ=255) tGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCGTTTCATAGAGTc > 4:356263/1‑139 (MQ=255) tGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATCGGTGCCGTCCTTTTCATAGAGTc > 8:122469/1‑139 (MQ=255) tGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGACTTTTACTTCTTGCTCATAATGATCAAGCGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGt < 2:164341/138‑1 (MQ=255) gTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATCGGTGCCGTCCTTTTCATAGAGTc < 7:122469/138‑1 (MQ=255) aGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTa < 1:339427/138‑1 (MQ=255) ggaaCCCTTCCCCGTTCGGCTTTGCTTTTCCACGATCCCGGAAGCCGTCTTTTAATGGTTGTTCATATTGAGCAAGAGGGGAAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGc < 1:211955/135‑1 (MQ=255) ttCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCCAGCGGCGGCGTGCCAGGGCCATTGGTGCCGTGCTTTTCATAGAGTGCGTAATGGCATGGGCa > 5:146722/1‑138 (MQ=255) ttCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACa > 8:12118/1‑138 (MQ=255) ttCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACa > 1:355746/1‑138 (MQ=255) cccccTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGGATGGACaaa > 8:387648/1‑138 (MQ=255) cccccTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACaa < 5:347960/137‑1 (MQ=255) cccccTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACaa > 4:79086/1‑137 (MQ=255) cccTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAg > 4:428012/1‑138 (MQ=255) tAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTATTTATTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGATTCCGTAATGGCATGGACAAAAGAAttt > 1:104601/1‑139 (MQ=255) tAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATa < 4:401202/109‑1 (MQ=255) tAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATa > 3:401202/1‑109 (MQ=255) tAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAAtt > 7:113010/1‑138 (MQ=255) tgctttTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATTATGATCAAGAGGCGCAAGCGGCGGCGGGCCAGGGCCATTGGTGCCGTCCGTTTGATAGAGTGCGTAATGGCATGGACAAAAGAATTTATTAggg > 6:39297/1‑138 (MQ=255) tgctttTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATTATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTGTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCggg > 4:358648/1‑138 (MQ=255) tgctttTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGGCATTGGTTCCGGCCGTTTGATAGAGTCAGTTATTGCATTGGCAAAATAATTTAttatgg > 1:428662/1‑135 (MQ=255) tgctttTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATaga < 6:225941/104‑1 (MQ=255) tgctttTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATaga > 5:225941/1‑104 (MQ=255) tgctttTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGCGTCCGGAATGGCAGGGGCAAAAGAATTTATTCggg > 5:367299/1‑138 (MQ=255) tgctttTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTc > 5:207243/1‑136 (MQ=255) tgctttTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTc < 6:207243/136‑1 (MQ=255) tgctttTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCggg > 1:275827/1‑138 (MQ=255) tgctttTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCggg > 4:114116/1‑138 (MQ=255) tgctttTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCggg > 8:33095/1‑138 (MQ=255) tgctttTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTAggg > 8:349524/1‑138 (MQ=255) tgctttTCCAAGATACAGGAAGCCGGCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCTGGGTCATTGGTGCCGTCCTTTTCATAGTGTGCGGAATGGCATGGACAAAAGCATTTATTCggg > 6:376040/1‑138 (MQ=255) tCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTTGTGCCGTCCATTTAATAGATTCCGTAATTGCATGGACAAAAGAAATTATTCGGGTTTTTa > 4:130436/1‑139 (MQ=255) tCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCGTTTACTATAGTGCGTAATTGCATGGACAAAAAAAATTATTAGGGTTTTTa > 5:23750/1‑139 (MQ=255) cAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAgg < 3:130436/139‑1 (MQ=255) cAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAgg < 6:215039/139‑1 (MQ=255) cAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAgg < 2:275827/139‑1 (MQ=255) aGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGAt < 2:355746/139‑1 (MQ=255) aGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGAt < 8:157316/139‑1 (MQ=255) gATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATc < 8:113010/139‑1 (MQ=255) aGGAAGACGTCTGTTACTTCTTGCTCATAATGATCAATAGGCTCAAGCGGCGGCGTGCCAGGGCCATTCGTGACGTCCGTTTCATAGAGTCCGTTATGGGATGGACAAAATAAATTATTCGGGGTTTTAGGATCACtt > 6:185701/1‑137 (MQ=255) aGCCGTCTTTTACTTCTTGCTCATAATGATCAAGCGGCGCACGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCa < 5:39297/139‑1 (MQ=255) ccGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGt > 5:306879/1‑139 (MQ=255) cGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGcc < 6:391447/52‑1 (MQ=255) cGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGcc > 5:391447/1‑52 (MQ=255) cGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGt > 4:372793/1‑138 (MQ=255) cGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGGTTTTAGGATGACTATTCCCGtt > 4:106873/1‑139 (MQ=255) ggcTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTc < 8:200025/137‑1 (MQ=255) gTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTc < 2:107110/139‑1 (MQ=255) tCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGCCATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCa > 6:312930/1‑139 (MQ=255) tCTTTTACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATATAGTCAGTAATGGCATGGTCAAAAGAATTTATTCGGGGTTTTAGGATGAGTATTCCAGttaa > 5:293073/1‑137 (MQ=255) tttACTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTGATAGAGTCCGTAATGGCATGGACAAAAGAATTTTTTAGGGTTTTTAGGATCAAAATTCCAGTTGACCg > 2:419339/1‑139 (MQ=255) aCTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTa < 3:79086/138‑1 (MQ=255) aCTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTa < 3:428012/138‑1 (MQ=255) aCTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTa < 3:372793/138‑1 (MQ=255) aCTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTa < 7:33095/138‑1 (MQ=255) aCTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTa < 3:358648/138‑1 (MQ=255) aCTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTa < 4:308450/138‑1 (MQ=255) aCTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTa < 6:308033/138‑1 (MQ=255) aCTTCTTGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTa < 5:9210/138‑1 (MQ=255) cttgttGCTCATAATGATCAAGAGGCTCAAGCGGCGGCGTGCCAGGGACTTTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTGCAGTTCACCGTac < 4:142402/138‑1 (MQ=255) cttcttGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTac < 3:56918/138‑1 (MQ=255) cttGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTac > 3:266194/1‑135 (MQ=255) cttGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTac < 4:266194/135‑1 (MQ=255) cttGCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTACAccc > 3:378955/1‑139 (MQ=255) gCTCATAATGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTACACCCTa > 1:207326/1‑138 (MQ=255) aaTGATCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTACGCCCTAAATGCt > 8:224646/1‑138 (MQ=255) tCAAGAGGCGCAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTAGTCCAGTTCACCGTACACCCTAAATGCTTACaaa > 6:19133/1‑139 (MQ=255) gcgcAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTACACCCTAAATGCTTACAAATTGGCGa < 8:34498/139‑1 (MQ=255) gcgcAAGCGGCGGCGTGCCAGGGACATTGGTGCCGTCCTTTTCATAGAGTCCGTAATGGCATGGACAAAAGAATTTATTCGGGTTTTTAGGATCACTATTCCAGTTCACCGTACACCCTAAATGCTTACAAATTGGCGa < 2:104601/139‑1 (MQ=255) | GGTGTAATATCAAGCCGCTCATCAACCCAGTCATAAATTTTGTTCAGCATGTCACCCTTCCCCCTTAGGCTTTGCTTTTCCAAGATACAGGAAGCCGTCTTTTACTTCTTGCTCATAATGATCAAGAGGCGAAAGCGGCGGCGTGCCCGGGACATTGGTGCCGTCCTTTTCATAGAGTCCATAATGGCATGGACAAAAGAATTTATTCGGATTTTTAGGATCGCTATTCCAGTTCACCGTACACCCTAAATGCTTACAAATTGGCGA > CP006881/2182385‑2182651 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |