| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,182,877 | C→T | G21G (GGG→GGA) | U712_10930 ← | Menaquinol‑cytochrome c reductase iron‑sulfur subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,182,877 | 0 | C | T | 97.8% | 266.4 / ‑4.3 | 92 | G21G (GGG→GGA) | U712_10930 | Menaquinol‑cytochrome c reductase iron‑sulfur subunit |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (44/44); total (47/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATCAAAGCGCTGCGGCTCTTTTGTCAGCTCATCTACGCTGACAACCTGAACCATGTCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCAAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCCCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATAACTTCTCCCCCCTCTAGGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACACC > CP006881/2182742‑2183010 | aTCAAAGCGCTGCGGCTCTTTTGTCAACTCATCAACGCTGACAACCTGAACCATATCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAAcctcct < 8:444371/139‑1 (MQ=255) tCAAAGCGCTGCGGCTCTTTTGTCAACTCATCAACGCTGACAACCTGAACCATATCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTa < 4:131347/139‑1 (MQ=255) aaaGCGCTGCGGCTCTTTTGTCAGCTCATCAACGCTGACAACCTGAACCATATCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTAc < 5:32664/138‑1 (MQ=255) cTGCGGCTCTTTTGTCAACTCATCAACGCTGACAACCTGAACCATATCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCtgtg < 8:137463/139‑1 (MQ=255) ctgCTCTTTTGTCAACTCATCAACGCTGACAACCTGAACCATATCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATTCTAGCCGCCATTAAACCTCCTACTCCTGTGa < 4:433026/135‑1 (MQ=255) cGGCTCTTTTGTCAACTCATCAACGCTGACAACCTGAACCATATCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGCGCATACTAGCCGCCATAAAACCACCTACGCCGGTGAGc > 1:98093/1‑139 (MQ=255) cGGCTCTTTTGTCAACTCATCAACGCTGACAACCTGAACCATATCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGa < 3:106873/137‑1 (MQ=255) cGGCTCTTTTGTCAACTCATCAACGCTGACAACCTGAACCATATCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGa < 6:18475/137‑1 (MQ=255) acccaCGCTGACAACCTCAACCATCACCTGCTTCCCGGTCGATTTTAATACCGGGTCGTGGGCTAAGCGAACCAACGGCAGGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGa < 2:373129/135‑1 (MQ=255) tcaaCGCTGACAACCTCAACCATATCCTGCTTCCCTGTCGATTTTAATACCGGGTCGCGGGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATAGAc < 6:87834/136‑1 (MQ=255) aaCGCAGACAACCTGAACCATATCCTGCTTCCCTGTCGATTTTAATCCCGGGTCGAGTGCGAAGCGAACCATTGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGt < 2:169405/138‑1 (MQ=255) tGACACCCTGAACCATATCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTTCGAAGCGAACCATAGGCATGAGCAAACATGCCCCCATAAAACCTCCAACCCCCGTTAGCGTATAATTCAAAAAATGACGTATgg > 8:285229/1‑138 (MQ=255) tGACAACCTGAACCATATCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGa > 7:32247/1‑139 (MQ=255) aCAACCTGAACCATATCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGcc < 6:373885/104‑1 (MQ=255) aCAACCTGAACCATATCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGcc > 5:373885/1‑104 (MQ=255) aCAACCTGAACCATATCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGata > 5:113786/1‑139 (MQ=255) aCAACCTGAACCATATCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGata > 4:48127/1‑139 (MQ=255) atatCCTGCTTCCCTGTCGAGTTTAATACCGGGGCGCGTGCGACGCGAACCCAACGCCAGAGCCTACTAGCCGCCAGAAAACCTACCACCCCGGTGGGCGGAAAATTAAAAAAATGCCGTCGGGGTAAATCAGGTGTTc > 2:352877/4‑139 (MQ=255) aTGTCCTGCTTCCCTGTCGAGTTTAATAACGGGTCGAGTGCAAACCGCACCCTATGCATGAGCATACAATCCGCCAAAAAACCCCCAACGCCGGTGAGCGTATTATTGAAAAATTTACGTATGGTTAAAAAATGtttta > 3:12774/1‑138 (MQ=255) tatCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTcc > 7:254219/3‑139 (MQ=255) tCCTGCTTCCCTGTCGATTTTTATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCCAACAAGCCGCCATAAAACCACCAACGCCAGTGAGCGTATAATTAAAAAATTTAAGTATTGATATTTCAATTTTTACGc > 6:246632/1‑139 (MQ=255) tCCTGCTTCCCTGTCGATTTTAATACCGGGTGGGCTTCGAAGCGCACCAAACGCATGCGCATACTAACCCCCCAAACACCTCCTACCCCGGGGAGCCTTTAATTCAAAAATTGAAGGCTGGATATATCAAGTTATCCgg > 6:401718/1‑138 (MQ=255) tCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCg < 5:210603/138‑1 (MQ=255) ccTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGcc < 3:48127/139‑1 (MQ=255) cTGCTTCCCTGTCGATTTTAATACCGGGTCGAGGGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGccc < 7:122643/139‑1 (MQ=255) cTTCCCTGTCGATTTTAATACCCGGTGGAGTGCGCAGCGCACCAAACGCAAGAGCATACAACCCGCCATAAAACCTCCTACGCCTGTGAGCGTAAAATTCAAAAAATAACGTCAGGATATATAATGGTTTCCGCCCAt > 6:159085/1‑138 (MQ=255) ttCCCTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGCACAATAGGCATGAGCATACAATCCGCCATAAAACCTCCTACCCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGACCAtc > 3:289504/1‑137 (MQ=255) cccTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAAtt < 5:200395/104‑1 (MQ=255) cccTGTCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAAtt > 6:200395/1‑104 (MQ=255) cccTGTCGATTTTAAAACCGGGTCGAGTTCGAAGCGCACCATAGGCTAGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTAAAATTCAAAAATTGACGTCTGGATATATGATGTTTTCCGCCAAtctat > 7:394204/1‑135 (MQ=255) tCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCCTACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTcc > 8:289894/1‑139 (MQ=255) tCGATTTTAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTcc < 7:285229/139‑1 (MQ=255) cGATTTTAATACGGGGTCGAGGGCGAAGCGAACCATAGGCTTGTGATTAGTAGCCGCCTTAAATCCTCCTACGCCTGTGAGGGTTTAATTCATAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTccc < 8:213298/139‑1 (MQ=255) gtttttAATACCGGGTCGAGTGCGATGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTccc < 5:159085/136‑1 (MQ=255) tttAATACCGGGTCGTGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTcccccc < 6:388045/138‑1 (MQ=255) tAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCctc > 4:331963/1‑138 (MQ=255) tAATACCGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCctc < 8:32247/138‑1 (MQ=255) cggggTCGCGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGt < 5:246632/136‑1 (MQ=255) cGGGTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCa < 8:254219/139‑1 (MQ=255) gggTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCTCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCAc > 5:258496/1‑139 (MQ=255) gggTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGccc > 4:446255/1‑114 (MQ=255) gggTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGccc < 3:446255/114‑1 (MQ=255) gggTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCACATCTCTTCTCCCCCCTCTAAGTCAc > 3:77077/1‑139 (MQ=255) ggTCGAGTGCGAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCAcc > 1:16181/1‑139 (MQ=255) gAGTGCAAAGCGAACCATAGGCATGAGCATACTAGCCGACATAAACCCCCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATAACTTCTCCCCCCTCTAGGTCACCCCt < 4:12774/138‑1 (MQ=255) gaaGCGAACCATAGGCATGAGCATACTAGCGGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACt < 6:310694/138‑1 (MQ=255) gaaGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCAt > 8:270323/2‑105 (MQ=255) gaaGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCAt < 7:270323/104‑1 (MQ=255) aaGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTtctc > 7:393329/1‑112 (MQ=255) aaGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTtctc < 8:393329/112‑1 (MQ=255) aaGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACt > 3:123108/1‑138 (MQ=255) aaGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACt > 2:38916/1‑138 (MQ=255) gAACCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTa < 3:391355/139‑1 (MQ=255) aaCCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTa > 4:391355/1‑138 (MQ=255) aaCCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTa > 8:45518/1‑138 (MQ=255) aCCATAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTaa > 5:240728/1‑138 (MQ=255) tAGGCATGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTAAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCACCTCTAATTCACACCTCCAAACTGACTaaaa > 8:302979/1‑136 (MQ=255) tGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTcc > 7:108524/1‑97 (MQ=255) tGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTcc < 8:108524/97‑1 (MQ=255) tGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCct < 2:277988/102‑1 (MQ=255) tGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCct > 1:277988/1‑102 (MQ=255) tGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGaa < 6:54139/135‑1 (MQ=255) tGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGaa > 5:54139/1‑135 (MQ=255) tGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAata > 5:65157/1‑139 (MQ=255) tGAGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTCACTAAAATAGAAAata > 4:270239/1‑139 (MQ=255) aGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGt > 3:247456/1‑60 (MQ=255) aGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAatat < 2:29071/138‑1 (MQ=255) aGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAatat < 7:123582/138‑1 (MQ=255) aGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATAtt > 6:4275/1‑139 (MQ=255) aGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATAtt > 8:357231/1‑139 (MQ=255) aGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATAtt > 1:329709/1‑139 (MQ=255) aGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATAtt > 8:348515/1‑139 (MQ=255) aGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATAtt > 2:395867/1‑139 (MQ=255) aGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATAtt > 1:75293/1‑139 (MQ=255) aGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATAtt > 8:365420/1‑139 (MQ=255) aGCATACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTAAAAAATTGACGt < 4:247456/60‑1 (MQ=255) tACTATCCCCCTAAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGTCGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCaa < 1:344870/139‑1 (MQ=255) tACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCaa < 7:289894/139‑1 (MQ=255) tACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCaa < 5:92017/139‑1 (MQ=255) tACTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCaa < 7:223662/139‑1 (MQ=255) aCTAGCCGCCATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAAt < 7:130907/139‑1 (MQ=255) tAGCCGCCATAAAACCTCCTACGCCTGTGCGCGGATAATTCAAAAATTGACTACTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCACTAAGTCACCCCGGCAAACTGACTAAAATAGAAAAAATTTCAATa > 4:205302/1‑138 (MQ=255) gccgccATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCaa < 1:181125/134‑1 (MQ=255) gccgccATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCaa > 2:181125/1‑134 (MQ=255) gccgccATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATaa < 2:104350/137‑1 (MQ=255) ccgccATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAActc > 8:76982/1‑139 (MQ=255) gccATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCaa > 2:89207/1‑131 (MQ=255) gccATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCaa < 1:89207/131‑1 (MQ=255) gccATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAActc > 1:84678/1‑137 (MQ=255) cATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGa < 7:45518/139‑1 (MQ=255) cATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGa < 7:348515/139‑1 (MQ=255) cATAAAACCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGa < 3:47481/139‑1 (MQ=255) aaaCCTCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATCTCTTCTCCCCCCTCTAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACAcc < 5:236247/139‑1 (MQ=255) | ATCAAAGCGCTGCGGCTCTTTTGTCAGCTCATCTACGCTGACAACCTGAACCATGTCCTGCTTCCCTGTCGATTTTAATACCGGGTCGAGTGCAAAGCGAACCATAGGCATGAGCATACTAGCCGCCATAAAACCCCCTACGCCTGTGAGCGTATAATTCAAAAATTGACGTCTGGATATATCATGTTTTCCGCCCATAACTTCTCCCCCCTCTAGGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACACC > CP006881/2182742‑2183010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |