Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,183,086 T→A *148L (TAA→TTA)  U712_10935 ← Uncharacterized protein ypiF

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,183,0860TA98.4% 366.2 / ‑4.6 122*148L (TAA→TTA) U712_10935Uncharacterized protein ypiF
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base A (77/43);  total (78/44)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 126 total aligned reads displayed.

TCTAGGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGTAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATTAGGTGCTCCACAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCTAATATTTTTCTTTTTAAGGAGTCATTTAAATGCTCTAACGGAACAGACGGTGTAACAATGATTTTGCCTAACGCATCCTC  >  CP006881/2182953‑2183219
                                                                                                                                     |                                                                                                                                     
tctAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTg                                                                                                                                  >  6:15456/1‑139 (MQ=255)
tctAAGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACACACTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTg                                                                                                                                  >  7:88489/1‑139 (MQ=255)
     gTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCca                                                                                                                             <  7:98210/139‑1 (MQ=255)
     gTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCca                                                                                                                             >  7:429565/1‑139 (MQ=255)
      tCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCcat                                                                                                                            <  3:87050/139‑2 (MQ=255)
        aCCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATaa                                                                                                                          <  2:98093/139‑1 (MQ=255)
         ccccTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAAc                                                                                                                         >  5:293714/1‑139 (MQ=255)
          cccTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACt                                                                                                                        >  1:145653/1‑139 (MQ=255)
          cccTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACt                                                                                                                        >  4:399682/1‑139 (MQ=255)
          cccTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACt                                                                                                                        >  1:65667/1‑139 (MQ=255)
          cccTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAAGATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAACGTGCTCCATAACt                                                                                                                        >  6:48506/1‑139 (MQ=255)
          cccTGCAAACTGACTAAAATAGAAAATATTGCAATAACTATAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACt                                                                                                                        >  6:161775/1‑139 (MQ=255)
                      aCTAAAATAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGt                                                                                                            >  3:873/1‑139 (MQ=255)
                       cTAAAATAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGtt                                                                                                           >  6:388065/1‑139 (MQ=255)
                           aaTAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCaa                                                                                                        >  8:189483/1‑138 (MQ=255)
                           aaTAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCaa                                                                                                        >  6:142157/1‑138 (MQ=255)
                                    tatTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTcagca                                                                                              <  5:15456/139‑1 (MQ=255)
                                       tGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAAttt                                                                                                   <  8:359979/131‑1 (MQ=255)
                                       tGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTg                                                                                           >  4:183574/1‑139 (MQ=255)
                                         cAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCg                                                                                         <  5:142157/139‑1 (MQ=255)
                                              aCTCTAGACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCAt                                                                                    >  6:118705/1‑139 (MQ=255)
                                                    gACACCCTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAata                                                                              >  8:121180/1‑139 (MQ=255)
                                                         ccTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATAttttt                                                                         >  4:408721/1‑139 (MQ=255)
                                                         ccTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATAttttt                                                                         >  6:360729/1‑139 (MQ=255)
                                                         ccTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAAGAttttt                                                                         >  1:402990/1‑139 (MQ=255)
                                                         ccTCATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGAGTTTTTATAAAGTGCGCCATAAATGTAACAAAACGTTCAAAATTTCAGCAGTGCTTTCATCAAATAtttta                                                                         >  5:42062/1‑138 (MQ=255)
                                                         ccTCATAATATATGAATCTCTCAGCAAGCTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATAtttt                                                                          >  5:42157/1‑138 (MQ=255)
                                                            cATAATATATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCtt                                                                      >  7:307295/1‑139 (MQ=255)
                                                            cATAATATATCAATCACTCATCAAGGTCAAGAGAGCCAAAATATTGTTTATTAGCAATTTAAACTGATTTTATAAAGTGATCCATAACTCTAACAAAACGTTCAAAAATTCAGCAGTCCGATCATCCATTAtattacat                                                                      >  8:171581/1‑135 (MQ=255)
                                                              taataTATGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCtttt                                                                    >  7:276332/1‑139 (MQ=255)
                                                                   tatGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTaaag                                                               >  4:210418/1‑137 (MQ=255)
                                                                   tatGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTa                                                                  >  7:225383/1‑136 (MQ=255)
                                                                   tatGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTa                                                                  >  6:20836/1‑136 (MQ=255)
                                                                   tatGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTa                                                                  >  6:58953/1‑136 (MQ=255)
                                                                   tatGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTa                                                                  >  1:37657/1‑136 (MQ=255)
                                                                     tGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAagag                                                             >  8:208627/1‑139 (MQ=255)
                                                                     tGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGa                                                              <  2:255757/138‑1 (MQ=255)
                                                                     tGAATCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAAAATTTTTCTTTTTAAagag                                                             >  8:416924/1‑139 (MQ=255)
                                                                       aaTCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGt                                                            >  8:105845/1‑138 (MQ=255)
                                                                       aaTCTCTCAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGt                                                            <  5:161775/138‑1 (MQ=255)
                                                                         tctatcAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGATCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCAt                                                         >  5:78290/1‑139 (MQ=255)
                                                                           tctcAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCaa                                                                                                        >  2:374751/1‑90 (MQ=255)
                                                                           tctcAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCAtt                                                        >  1:153970/1‑138 (MQ=255)
                                                                           tctcAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCAtt                                                        >  5:170030/1‑138 (MQ=255)
                                                                           tctcAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTATTTAAAGAGTCAtt                                                        >  1:337926/1‑138 (MQ=255)
                                                                            ctcAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCAttt                                                       >  8:395259/1‑138 (MQ=255)
                                                                            ctcAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGAGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAAGATTTTTCTTTTTAAAGAGTCAttt                                                       >  6:212798/1‑138 (MQ=255)
                                                                             tcAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTa                                                      >  6:387505/1‑138 (MQ=255)
                                                                             tcAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTa                                                      >  8:68669/1‑138 (MQ=255)
                                                                             tcAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTa                                                      >  2:139651/1‑138 (MQ=255)
                                                                             tcAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTa                                                      >  4:411194/1‑138 (MQ=255)
                                                                             tcAGCAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTa                                                      >  3:277170/1‑138 (MQ=255)
                                                                               agcaaGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTaaa                                                    <  1:407305/135‑1 (MQ=255)
                                                                               agcaaGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTaaa                                                    <  8:429565/135‑1 (MQ=255)
                                                                               agcaaGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTaaa                                                    <  5:388065/135‑1 (MQ=255)
                                                                               agcaaGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTaaa                                                    <  5:118705/135‑1 (MQ=255)
                                                                               agcaaGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTaaa                                                    <  1:139651/135‑1 (MQ=255)
                                                                               agcaaGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTaaa                                                    <  7:395259/135‑1 (MQ=255)
                                                                               agcaaGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTaaa                                                    <  6:170030/135‑1 (MQ=255)
                                                                               agcaaGGTCAATATAGCCAAAATATTGATTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTaa                                                     <  6:28184/134‑1 (MQ=255)
                                                                               agcaaGGGCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGAGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTaaa                                                    <  1:329447/135‑1 (MQ=255)
                                                                                 caaGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGc                                                 <  7:208627/138‑1 (MQ=255)
                                                                                    ggTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAGAGTGCTCCATAACTGTAACAAAACGTTCaa                                                                                                        >  6:41413/1‑81 (MQ=255)
                                                                                    ggTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAACACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGACATTTACATGctc                                               >  2:354288/1‑138 (MQ=255)
                                                                                    ggTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGctc                                               >  1:234672/1‑138 (MQ=255)
                                                                                    ggTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGctc                                               >  3:139637/1‑138 (MQ=255)
                                                                                    ggTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATATAAATGctc                                               >  3:246366/1‑138 (MQ=255)
                                                                                            taGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGaa                                       <  4:139637/138‑1 (MQ=255)
                                                                                              gCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACa                                     <  1:38916/138‑1 (MQ=255)
                                                                                               ccAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATTAGGTGCTCCACAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCTAATATTTTTCTTTTTAAGGAGTCATTTAAATGCTCTAACGGAACAGa                                   >  1:425726/1‑139 (MQ=255)
                                                                                               ccAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAATGAGTCATTTATATGCTCTAATGGAACAGa                                   >  3:230456/1‑139 (MQ=255)
                                                                                               ccAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTaa                                            >  8:235621/1‑130 (MQ=255)
                                                                                               ccAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTaa                                            <  7:235621/130‑1 (MQ=255)
                                                                                               ccAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGa                                   >  1:300444/1‑139 (MQ=255)
                                                                                               ccAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGa                                   <  5:296337/139‑1 (MQ=255)
                                                                                               ccAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGa                                   <  2:234672/139‑1 (MQ=255)
                                                                                               ccAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGa                                   >  4:438127/1‑139 (MQ=255)
                                                                                               ccAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGa                                   >  7:337489/1‑139 (MQ=255)
                                                                                               ccAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGa                                   >  5:164124/1‑139 (MQ=255)
                                                                                               ccAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAACGGAACAGa                                   <  8:260153/139‑1 (MQ=255)
                                                                                                  aaaTATTGTTTATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGACga                                >  6:224643/1‑138 (MQ=255)
                                                                                                          tttATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGACGATGTAACaa                        <  2:145653/139‑1 (MQ=255)
                                                                                                          tttATAAGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGACGATGTAACa                         <  7:170879/138‑1 (MQ=255)
                                                                                                                aGGAACTGTAAGTGTTTTTATAAAGTGCTCCATAACAGTAACAAAACGTTCAAAATATCAGCATTGCGTTCATACAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGACGATGTAACAATCAta                   <  4:286419/138‑2 (MQ=255)
                                                                                                                aGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGACGATGTAACAATCAtt                   <  6:42157/138‑1 (MQ=255)
                                                                                                                aGGAAATGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGACGATGTAACAATCAtt                   <  3:446553/138‑1 (MQ=255)
                                                                                                                    aaTGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCAACCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGACGATGTAACAATCATTTTGcc              >  7:260783/1‑139 (MQ=255)
                                                                                                                     aTGTAAGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGACGATGTAACAATCATTTTGCCt             <  7:409477/139‑1 (MQ=255)
                                                                                                                        tAAGTGTTTTTATTAGGTGCTCCACAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCTAATATTTTTCTTTTTAAGGAGTCATTTAAATGCTCTAACGGAACAGACGGTGTAACAATGATTTTGCCTaa           <  2:425726/138‑1 (MQ=255)
                                                                                                                          aGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGACGATGTAACAATCATTTTGCCTAACGc        <  2:408681/139‑1 (MQ=255)
                                                                                                                          aGTGTTTTTATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGACGATGTAACAATCATTTTGCCTAACGc        <  2:75293/139‑1 (MQ=255)
                                                                                                                              tttttATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGACGATGTAACAATCATTTTGCCTAACGCATc     <  4:873/138‑1 (MQ=255)
                                                                                                                                tttATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGACGATGTAACAATCATTTTGCCTAACGCATCCt   >  3:397006/1‑138 (MQ=255)
                                                                                                                                tttATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGACGATGTAACAATCATTTTGCCTAACGCATCCt   >  5:336794/1‑138 (MQ=255)
                                                                                                                                tttATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAATGCGTTCATCCAATATTTTTCTTTTTAAagag                                                             >  7:389248/1‑80 (MQ=255)
                                                                                                                                tttATAAAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAATGCGTTCATCCAATATTTTTCTTTTTAAagag                                                             <  8:389248/80‑1 (MQ=255)
                                                                                                                                 ttataaAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTaaa                                                    >  2:286165/1‑88 (MQ=255)
                                                                                                                                 ttataaAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTaaa                                                    <  1:286165/88‑1 (MQ=255)
                                                                                                                                 ttataaAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGACGATGTAACAATCATTTTGCCTAACGCATCCTc  <  2:300444/138‑1 (MQ=255)
                                                                                                                                 ttataaAGTGCTCCATAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCCAATATTTTTCTTTTTAAAGAGTCATTTAAATGCTCTAATGGAACAGACGATGTAACAATCATTTTGCCTAACGCATCCTc  <  4:277170/138‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                     
TCTAGGTCACCCCTGCAAACTGACTAAAATAGAAAATATTGCAATAACTCTAGACACCCTCATAATATATGAATCTCTCAGTAAGGTCAATATAGCCAAAATATTGTTTATAAGGAAATGTAAGTGTTTTTATTAGGTGCTCCACAACTGTAACAAAACGTTCAAAATTTCAGCAGTGCGTTCATCTAATATTTTTCTTTTTAAGGAGTCATTTAAATGCTCTAACGGAACAGACGGTGTAACAATGATTTTGCCTAACGCATCCTC  >  CP006881/2182953‑2183219

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: