Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,183,970	T→A	A51A (GCA→GCT)	U712_10940 ←	Hypothetical Protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,183,970	0	T	A	100.0%	262.8 / NA	84	A51A (GCA→GCT)	U712_10940	Hypothetical Protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (59/25);  total (59/25)

TCCTGCTGTTTATTTAATCTAATATCATGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAACTCTGCCTGCTCTACAAAATGAACCTTTTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATAAAATCTTTTT  >  CP006881/2183836‑2184094                                                                                                                                       |                                                                                                                             tCCTGCTGTTTATTTAATCTAATATCATGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTcagcct                                                                                                                          >  4:120139/1‑139 (MQ=255) tCCTGCTGTTTATTTAATCTAATATCATGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTcagcct                                                                                                                          >  7:8850/1‑139 (MQ=255) tCCTGCTGTTTATTTAATCTAATATCATGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTcagcct                                                                                                                          >  1:412110/1‑139 (MQ=255) tCCTGCTGTTTATTTAATCTAATATCATGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTcagcct                                                                                                                          >  1:8861/1‑139 (MQ=255)   ctgctgTTTATTTAATCTAATATCATGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTcagcctg                                                                                                                         <  6:335035/138‑1 (MQ=255)      ctgTTTATTTAATCTAATATCATGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGctc                                                                                                                      >  5:200510/1‑138 (MQ=255)             tttaATCTAATATCATGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAAt                                                                                                              >  2:390918/1‑139 (MQ=255)                aaTCTAATATCATGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGaa                                                                                                           >  5:317910/1‑139 (MQ=255)                  tttAATATCTTTAATAGTTTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCTGAACGGAACTTCTTCAACACAATGTGTTGATATTATAATGCCTCTCGGGAAATATTCAGGCTGCTCCACAAAATGAAcc                                                                                                         <  4:86926/137‑1 (MQ=255)                    tAATATCATGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCtt                                                                                                       <  4:182160/139‑1 (MQ=255)                      atatCATGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAAcc                                                                                                         <  8:413564/135‑1 (MQ=255)                           aTGAAAAGATTTTTCCGCGTCGGTAGTCATGCCATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCAt                                                                                                 >  4:143914/1‑138 (MQ=255)                           aTGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCAt                                                                                                 >  8:419869/1‑138 (MQ=255)                            tGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCAt                                                                                                 >  3:23043/1‑137 (MQ=255)                            tGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCAt                                                                                                 >  3:134436/1‑137 (MQ=255)                            tGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCAt                                                                                                 >  6:261061/1‑137 (MQ=255)                            tGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCAt                                                                                                 >  3:267559/1‑137 (MQ=255)                            tGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCAt                                                                                                 >  3:92891/1‑137 (MQ=255)                            tGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCAt                                                                                                 >  7:48625/1‑137 (MQ=255)                            tGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCAt                                                                                                 >  1:304178/1‑137 (MQ=255)                            tGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCAt                                                                                                 >  1:122102/1‑137 (MQ=255)                            tGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCAt                                                                                                 >  1:108693/1‑137 (MQ=255)                                       ttCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATg                                                                                     <  5:261061/138‑1 (MQ=255)                                       ttCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATg                                                                                     <  6:399698/138‑1 (MQ=255)                                       ttCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATg                                                                                     <  2:122102/138‑1 (MQ=255)                                       ttCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATg                                                                                     <  3:179038/138‑1 (MQ=255)                                       ttCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATg                                                                                     <  4:134436/138‑1 (MQ=255)                                       ttCCGCGGCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATg                                                                                     <  4:268810/138‑1 (MQ=255)                                        tCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGc                                                                                   >  7:337152/1‑139 (MQ=255)                                                ggTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAag                                                                           <  5:166234/139‑1 (MQ=255)                                                ggTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAag                                                                           <  1:417433/139‑1 (MQ=255)                                                         gACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCat                                                                   >  8:438555/1‑137 (MQ=255)                                                               ctctTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCa                                                             >  1:354375/1‑138 (MQ=255)                                                               ctctTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGATCATTAAGTAGTTCAAGATCaaa                                                            >  4:317456/1‑139 (MQ=255)                                                                 ctTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCAAAAc                                                          >  6:257317/1‑139 (MQ=255)                                                                   ttATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCa                                                                                >  3:302843/1‑115 (MQ=255)                                                                   ttATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCa                                                                                <  4:302843/115‑1 (MQ=255)                                                                     ataGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCa                                                       <  3:54471/138‑1 (MQ=255)                                                                          aCCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCCCAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCg                                                 >  3:367343/1‑139 (MQ=255)                                                                           ccGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCgg                                                <  1:13059/139‑1 (MQ=255)                                                                            cggaacggaaCTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGgc                                               >  1:195745/1‑139 (MQ=255)                                                                            cggaacggaaCTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTAAAGATCCAAACGCACTCTCGgc                                               >  7:140772/1‑139 (MQ=255)                                                                            cggaacggaaCTTCTTCAACACAATGTGTTGAAATTATAATGCCTCTCGCGCAAAATTCAGCCTGCTCCACAAAATGAACCTACTCCATGAGAGAATCATTCCTCATTAAGTAGTTCAATATACAAACGCAATCTCGgc                                               >  6:299587/1‑139 (MQ=255)                                                                              gaacggaacTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACTCACTCTCGgagc                                             >  2:178889/1‑139 (MQ=255)                                                                              gaacgcaacTTCTACAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCACCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCACGgcgc                                             >  6:389611/1‑139 (MQ=255)                                                                                   gaacTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTaa                                        <  2:354375/139‑1 (MQ=255)                                                                                      cttcttCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACt                                      >  1:146015/1‑138 (MQ=255)                                                                                              acacAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATgag                                                                                              >  6:268785/1‑74 (MQ=255)                                                                                              acacAATGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATgag                                                                                              <  5:268785/74‑1 (MQ=255)                                                                                                  aaTGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATTGTTTa                          >  4:198139/1‑138 (MQ=255)                                                                                                  aaTGTGTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTa                          >  2:319716/1‑138 (MQ=255)                                                                                                    tgtgTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTaaa                        >  8:347938/1‑138 (MQ=255)                                                                                                    tgtgTTGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTaaa                        >  6:397919/1‑138 (MQ=255)                                                                                                         tGACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCaa                  >  4:251881/1‑139 (MQ=255)                                                                                                          gACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATg                                                                                     >  8:390952/1‑71 (MQ=255)                                                                                                          gACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATg                                                                                     <  7:390952/71‑1 (MQ=255)                                                                                                          gACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTTTCGGCGCTTTAACTGATAATGGTTTAAAAACCAAc                 >  7:159672/1‑139 (MQ=255)                                                                                                          gACATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCaa                  <  6:200510/138‑1 (MQ=255)                                                                                                           aCATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACg                >  8:433753/1‑139 (MQ=255)                                                                                                            cATTATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACg                >  2:141137/1‑138 (MQ=255)                                                                                                              ttATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGa              >  8:154470/1‑138 (MQ=255)                                                                                                              ttATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGa              >  6:204964/1‑138 (MQ=255)                                                                                                              ttATAATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGa              >  3:166823/1‑138 (MQ=255)                                                                                                                ataATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATa            >  1:345482/1‑138 (MQ=255)                                                                                                                ataATGCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATa            >  3:233593/1‑138 (MQ=255)                                                                                                                     gCCTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATAAAATCt      >  8:196412/1‑139 (MQ=255)                                                                                                                      ccTCTCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATAAAATCtt     >  4:227047/1‑139 (MQ=255)                                                                                                                       ctctCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCa                                                                                >  8:65969/1‑63 (MQ=255)                                                                                                                       ctctCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCa                                                                                <  7:65969/63‑1 (MQ=255)                                                                                                                       ctctCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATAAAATCttt    >  6:263906/1‑139 (MQ=255)                                                                                                                       ctctCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATAAAATCttt    >  2:162465/1‑139 (MQ=255)                                                                                                                       ctctCGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATAAAATCttt    >  5:108019/1‑139 (MQ=255)                                                                                                                         ctcGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATg                                                                                     <  3:196008/56‑1 (MQ=255)                                                                                                                         ctcGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGTCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATAAAATAttttt  >  7:440196/1‑139 (MQ=255)                                                                                                                         ctcGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCATGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATAAAATCttttt  >  1:155259/1‑139 (MQ=255)                                                                                                                         ctcGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTaa                                        >  2:104032/1‑101 (MQ=255)                                                                                                                         ctcGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTaa                                        <  1:104032/101‑1 (MQ=255)                                                                                                                         ctcGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATAAAATCttttt  >  2:145052/1‑139 (MQ=255)                                                                                                                         ctcGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATAAAATCttttt  >  4:270372/1‑139 (MQ=255)                                                                                                                         ctcGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATAAAATCttttt  >  4:40822/1‑139 (MQ=255)                                                                                                                         ctcGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTCATAATGGTTTAAAAACCAACGGATAAAATCttttt  >  6:192489/1‑139 (MQ=255)                                                                                                                         ctcGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGAAGTTCAAGAACCAACCGCACGCTCGGCGCTATAACAGATAAAGGTTTAAAAACCAACGCATAAAAtgaattt  >  6:317930/1‑133 (MQ=255)                                                                                                                         ctcGCGCAAAATTCAGCCTGCACCACAAAATGAACCTTCTCCATCACAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACCCACTCTCGGCGCTTTAACTGATAATGGTTAAAAAACCAACCGAAAAAATCtatat  >  7:57834/1‑135 (MQ=255)                                                                                                                          tcGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATAAAATCtttt   <  3:143914/137‑1 (MQ=255)                                                                                                                          tcGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATAAAATCtttt   <  7:419869/137‑1 (MQ=255)                                                                                                                           cGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTaa                                        <  5:72134/99‑1 (MQ=255)                                                                                                                           cGGGCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTaa                                        >  6:72134/1‑99 (MQ=255)                                                                                                                              gCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCa                                                                                <  5:224896/56‑1 (MQ=255)                                                                                                                              gCAAAATTCAGCCTGCTCCACAAAATGAACCTTCTCCATGAGAGAATCATGGCTCa                                                                                >  6:224896/1‑56 (MQ=255)                                                                                                                                       |                                                                                                                             TCCTGCTGTTTATTTAATCTAATATCATGAAAAGATTTTTCCGCGTCGGTAGTCATGACATTCTCTTTATAGAACCGGAACGGAACTTCTTCAACACAATGTGTTGACATTATAATGCCTCTCGGGCAAAACTCTGCCTGCTCTACAAAATGAACCTTTTCCATGAGAGAATCATGGCTCATTAAGTAGTTCAAGATCCAAACGCACTCTCGGCGCTTTAACTGATAATGGTTTAAAAACCAACGGATAAAATCTTTTT  >  CP006881/2183836‑2184094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑