| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,184,257 | A→C | I403M (ATT→ATG) | U712_10945 ← | TPR repeat‑containing protein ypiA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,184,257 | 0 | A | C | 97.6% | 373.8 / NA | 124 | I403M (ATT→ATG) | U712_10945 | TPR repeat‑containing protein ypiA |
| Reads supporting (aligned to +/- strand): ref base A (0/3); new base C (73/48); total (73/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.72e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 124 total aligned reads displayed.
GTAATTCCCTCCTCTATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTGAACATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTCTCTTCCAGCTCTTCATTGGCCCCGTCAATTTCAAGAACCTTTTTCAAAAGCGGAAGCGCTTCTTTCTGCAGGCCTTCTTCTAATAAGAAGCTTGCGTATTCGTATAAGAAATCTCTGTCCTCCCGGTAGTGAAGAAAGGCAGCCTCAAAGGATTGTTTTGCT > CP006881/2184123‑2184392 | aaTTCCCTCCTCTATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTc > 2:134701/1‑138 (MQ=255) tcctaTATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCt > 3:43945/1‑139 (MQ=255) ctctATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTATCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAAcatat > 3:159462/1‑135 (MQ=255) ttcgtATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAg > 7:90847/1‑139 (MQ=255) cgtATAATCTATTTACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCg > 4:320457/1‑139 (MQ=255) cgtATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCg > 2:33088/1‑139 (MQ=255) cgtATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCg > 3:117500/1‑139 (MQ=255) tataATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCgg > 8:37335/1‑138 (MQ=255) ataATCTATATACTTATATGTTCCACATGAATGGTTAAAATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCgg > 2:254722/1‑137 (MQ=255) tCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAgcgc > 6:158897/1‑139 (MQ=255) tCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAgcgc > 2:82743/1‑139 (MQ=255) tataCTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGcttct > 5:324537/1‑139 (MQ=255) tataCATATATGTTCCACATGAATGGTTAATATTCCTGATTATCTAGATAATTCATCCTCGATTCTCAAAATCGTTTCTTCAAGCTCTTCATTGGCTACGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGcttat > 1:64966/1‑137 (MQ=255) ttATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCttcttttt > 4:129589/1‑136 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAg > 3:352047/1‑104 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAg < 4:352047/104‑1 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTg > 7:297996/1‑137 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTg > 3:389953/1‑137 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTg > 1:118129/1‑137 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTg > 2:250577/1‑137 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCACTTCTTTTTg > 3:27267/1‑137 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTATTCATAGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCTGCAGCGCTTCTTTTTgaa > 8:362031/1‑137 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCAGCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGACCCTTTTTCAAAAGCGGCAGCGCTTCTTTTTga < 8:159672/138‑2 (MQ=255) tatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTgaa > 2:371570/1‑136 (MQ=255) tatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGAGGCAGCGCTTCTTTTTGAAg > 1:404835/1‑139 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAATCGGCAGCGCTTCTTTTTgatgac > 5:24620/1‑134 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAATCGGCAGCGCTTCTTTTTGAAgac > 3:298776/1‑137 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAgac > 6:207119/1‑137 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAgac < 6:132535/139‑3 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAgac > 5:185317/1‑137 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAgac > 7:166241/1‑137 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAgac > 4:130295/1‑137 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAgac > 8:209192/1‑137 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAgac > 7:88656/1‑137 (MQ=255) gTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc > 1:130821/1‑139 (MQ=255) ttCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcca > 5:166646/1‑138 (MQ=255) ttCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc < 6:324537/138‑1 (MQ=255) ttCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc < 6:11637/138‑1 (MQ=255) ttCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc < 6:254023/138‑1 (MQ=255) ttCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCACCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAACAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc < 5:292323/138‑1 (MQ=255) tCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACctt > 6:61551/1‑139 (MQ=255) tCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACctt > 5:132641/1‑139 (MQ=255) ccACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttc > 3:413278/1‑139 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGTCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACgttct > 4:324404/1‑139 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttct > 8:320234/1‑139 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttat > 5:396748/1‑137 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAAACTTTTTCAAAAGCGCCAGCGCTTCTTTTTGAAGACcttct > 6:292323/1‑139 (MQ=255) caTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGACCCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGATGTCAttcttc > 1:91693/1‑139 (MQ=255) caTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttc < 5:27865/136‑1 (MQ=255) caTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCttcttc > 7:61497/1‑139 (MQ=255) aTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTtcttct < 4:117500/139‑1 (MQ=255) aTGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATTGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCtaa > 8:20332/1‑137 (MQ=255) aTGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCtaata < 6:133885/139‑1 (MQ=255) aTGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCtaat < 6:132641/138‑1 (MQ=255) aataTTCCTGCTTATCTAGAAAATTCATCCTCGATTCTCAAAATCGTTTCTTCAAGATCTTCATTGGCTCCGTCAATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATaggaag < 8:248370/135‑1 (MQ=255) aataTTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGc > 7:192001/4‑139 (MQ=255) aataTTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGc > 1:298027/4‑139 (MQ=255) ccTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGt > 8:209706/1‑139 (MQ=255) ccTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCGTTTTTAAGCCCTTCTTCTAATAGGCAGCTTGCGt > 6:40839/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATATGAAGCTAGCGTa > 1:97356/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 2:51188/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 5:72509/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 1:246370/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 7:220970/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 3:400731/1‑139 (MQ=255) tGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGTAGACCTTCTTATAATAGGAAGATTGCGTAt > 2:228769/1‑139 (MQ=255) tGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTAt > 7:159428/1‑139 (MQ=255) tGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTAt > 3:8518/1‑139 (MQ=255) aTCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTca < 8:61497/137‑2 (MQ=255) tCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCAta < 6:327201/138‑1 (MQ=255) gAAAATTCATCCTCGATTCGCAAAATCGGTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGa < 1:141137/139‑1 (MQ=255) caaaaTTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAACAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGa < 6:359621/138‑1 (MQ=255) ttCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAAtc > 5:358829/1‑138 (MQ=255) gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcctcc < 1:101272/139‑1 (MQ=255) gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcctcc < 5:158897/139‑1 (MQ=255) gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcct < 1:51188/137‑1 (MQ=255) ttCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCg < 1:161552/139‑1 (MQ=255) tCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCg < 4:298776/138‑1 (MQ=255) gCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTa < 6:72509/139‑1 (MQ=255) cAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTaa < 4:413278/139‑2 (MQ=255) cAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTaa < 7:375965/139‑2 (MQ=255) ctTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAgg < 1:250577/138‑1 (MQ=255) ctTCAAGCTCTTCATTGGCTCCGTCAATTTCAAGAACCTTTTTCAACAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAgg < 2:404835/138‑1 (MQ=255) caaGCTGTTCATTGGCTCCGTCCATTTCAACAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 3:320457/134‑1 (MQ=255) caaGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 4:400731/134‑1 (MQ=255) caaGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 3:130295/134‑1 (MQ=255) caaGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 2:298027/134‑1 (MQ=255) ctctTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCa < 8:159428/139‑1 (MQ=255) ctagtCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGTCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCa < 6:24620/135‑1 (MQ=255) ttCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCttcttc > 2:323281/1‑69 (MQ=255) ttCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCttcttc < 1:323281/69‑1 (MQ=255) ttCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGa < 5:72716/98‑1 (MQ=255) cATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCa < 4:58849/134‑1 (MQ=255) cATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAACATGCGAATTCATATAATAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGa > 1:269147/1‑139 (MQ=255) aTTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGAt < 5:428419/139‑1 (MQ=255) ctccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGttt > 6:338481/3‑139 (MQ=255) ccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTg < 2:130821/139‑1 (MQ=255) ccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCGTCGTTTTGAAGACCTTCTTCTAATAGGAAGCGTGGGTATTGATATAAGAAATCTCTATAATCCCGGGTATTAAGATAGGCCCCCTCAAAGGATTGTTTTg > 6:45026/1‑139 (MQ=255) cttCAATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGTAGACGTTGTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATGCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTg < 7:208676/136‑1 (MQ=255) gTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCt > 5:161007/1‑139 (MQ=255) | GTAATTCCCTCCTCTATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTGAACATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTCTCTTCCAGCTCTTCATTGGCCCCGTCAATTTCAAGAACCTTTTTCAAAAGCGGAAGCGCTTCTTTCTGCAGGCCTTCTTCTAATAAGAAGCTTGCGTATTCGTATAAGAAATCTCTGTCCTCCCGGTAGTGAAGAAAGGCAGCCTCAAAGGATTGTTTTGCT > CP006881/2184123‑2184392 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |