| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,184,299 | C→A | L389L (CTG→CTT) | U712_10945 ← | TPR repeat‑containing protein ypiA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,184,299 | 0 | C | A | 98.4% | 383.6 / NA | 124 | L389L (CTG→CTT) | U712_10945 | TPR repeat‑containing protein ypiA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (48/74); minor base T (1/1); total (49/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 124 total aligned reads displayed.
TATGTTCCACATGAATGGTGAACATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTCTCTTCCAGCTCTTCATTGGCCCCGTCAATTTCAAGAACCTTTTTCAAAAGCGGAAGCGCTTCTTTCTGCAGGCCTTCTTCTAATAAGAAGCTTGCGTATTCGTATAAGAAATCTCTGTCCTCCCGGTAGTGAAGAAAGGCAGCCTCAAAGGATTGTTTTGCTTTCTCGTATTGCTCTAATTCGGTATATGCACTTGCAA > CP006881/2184163‑2184429 | tatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGAGGCAGCGCTTCTTTTTGAAg > 1:404835/1‑139 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAATCGGCAGCGCTTCTTTTTGAAgac > 3:298776/1‑137 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAgac > 4:130295/1‑137 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAgac > 8:209192/1‑137 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAgac > 7:88656/1‑137 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAgac > 7:166241/1‑137 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAgac > 5:185317/1‑137 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAgac < 6:132535/139‑3 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAgac > 6:207119/1‑137 (MQ=255) gTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAgac < 1:309466/138‑3 (MQ=255) gTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc > 1:130821/1‑139 (MQ=255) ttCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcca > 5:166646/1‑138 (MQ=255) ttCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc < 6:254023/138‑1 (MQ=255) ttCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc < 6:11637/138‑1 (MQ=255) ttCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc < 6:324537/138‑1 (MQ=255) ttCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCACCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAACAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc < 5:292323/138‑1 (MQ=255) tCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACctt > 5:132641/1‑139 (MQ=255) ccACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttc > 3:413278/1‑139 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGTCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACgttct > 4:324404/1‑139 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttct > 2:161552/1‑139 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttct > 8:320234/1‑139 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAAACTTTTTCAAAAGCGCCAGCGCTTCTTTTTGAAGACcttct > 6:292323/1‑139 (MQ=255) acaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCACTTCTTTTTGAAGACcttctt < 4:27267/139‑1 (MQ=255) caTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttc < 5:27865/136‑1 (MQ=255) caTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCttcttc > 7:61497/1‑139 (MQ=255) caTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCttcttc > 5:78120/1‑139 (MQ=255) aTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTtcttct < 4:117500/139‑1 (MQ=255) aTGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATTGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCtaa > 8:20332/1‑137 (MQ=255) aTGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCtaat < 6:132641/138‑1 (MQ=255) aataTTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGc > 7:192001/4‑139 (MQ=255) ccTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGt > 8:209706/1‑139 (MQ=255) ccTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCGTTTTTAAGCCCTTCTTCTAATAGGCAGCTTGCGt > 6:40839/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATATGAAGCTAGCGTa > 1:97356/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 2:51188/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa < 8:297996/139‑1 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 7:220970/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 1:246370/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 5:72509/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 3:400731/1‑139 (MQ=255) tGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTAt > 7:159428/1‑139 (MQ=255) tGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTAt > 3:8518/1‑139 (MQ=255) aTCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTca < 8:61497/137‑2 (MQ=255) tCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCAta < 6:327201/138‑1 (MQ=255) gAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAg < 4:389953/138‑1 (MQ=255) gAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGa < 7:209706/139‑1 (MQ=255) gAAAATTCATCCTCGATTCGCAAAATCGGTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGa < 1:141137/139‑1 (MQ=255) caaaaTTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAACAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGa < 6:359621/138‑1 (MQ=255) ttCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAAtc > 5:358829/1‑138 (MQ=255) ccTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtc > 3:374265/1‑139 (MQ=255) gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTTTAtcctcc < 8:166241/139‑1 (MQ=255) gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcctcc < 1:101272/139‑1 (MQ=255) gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcctcc < 1:82743/139‑1 (MQ=255) gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcctcc < 5:158897/139‑1 (MQ=255) gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcct < 1:51188/137‑1 (MQ=255) ttCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCg < 1:161552/139‑1 (MQ=255) gCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTa < 6:72509/139‑1 (MQ=255) cAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTaa < 7:375965/139‑2 (MQ=255) ctTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAgg < 1:250577/138‑1 (MQ=255) caaGCTGTTCATTGGCTCCGTCCATTTCAACAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 3:320457/134‑1 (MQ=255) caaGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 4:400731/134‑1 (MQ=255) caaGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 2:298027/134‑1 (MQ=255) caaGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 3:130295/134‑1 (MQ=255) ctctTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCa < 8:159428/139‑1 (MQ=255) ctagtCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGTCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCa < 6:24620/135‑1 (MQ=255) ttCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCttcttc > 2:323281/1‑69 (MQ=255) ttCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCttcttc < 1:323281/69‑1 (MQ=255) ttCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGa > 6:72716/1‑98 (MQ=255) cATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCa < 4:58849/134‑1 (MQ=255) cATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAACATGCGAATTCATATAATAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGa > 1:269147/1‑139 (MQ=255) aTTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGa < 3:186726/138‑1 (MQ=255) aTTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGAt < 5:428419/139‑1 (MQ=255) ctccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGttt > 6:338481/3‑139 (MQ=255) ccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTg > 5:371636/1‑139 (MQ=255) ccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTg < 2:130821/139‑1 (MQ=255) ccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCGTCGTTTTGAAGACCTTCTTCTAATAGGAAGCGTGGGTATTGATATAAGAAATCTCTATAATCCCGGGTATTAAGATAGGCCCCCTCAAAGGATTGTTTTg > 6:45026/1‑139 (MQ=255) cttCAATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGTAGACGTTGTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATGCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTg < 7:208676/136‑1 (MQ=255) gTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCt > 5:161007/1‑139 (MQ=255) ttaaaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 2:135097/108‑1 (MQ=255) ttCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc > 1:135097/1‑111 (MQ=255) cAAGAACCTTTTTCAAACGCTGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGt < 8:80190/138‑1 (MQ=255) aataaCCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt < 1:419794/136‑1 (MQ=255) aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt < 4:8518/139‑1 (MQ=255) aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt < 1:33088/139‑1 (MQ=255) aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt < 5:40839/139‑1 (MQ=255) aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt < 5:338481/139‑1 (MQ=255) aGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAtt > 2:364166/1‑139 (MQ=255) gAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTg > 2:311245/1‑139 (MQ=255) ccTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGctc < 3:156419/139‑1 (MQ=255) tttCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTaa < 7:37335/138‑1 (MQ=255) tttCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTaa < 1:371570/138‑1 (MQ=255) tttCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTaa < 1:228769/138‑1 (MQ=255) tCAATAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt < 7:362031/138‑1 (MQ=255) tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt < 5:61551/138‑1 (MQ=255) tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt < 4:374265/138‑1 (MQ=255) tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt < 4:43945/138‑1 (MQ=255) tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt < 8:220970/138‑1 (MQ=255) tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt < 7:444010/138‑1 (MQ=255) tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt < 6:185317/138‑1 (MQ=255) gcgcTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCt < 7:209192/139‑1 (MQ=255) ctttttGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCaa < 6:396748/138‑1 (MQ=255) | TATGTTCCACATGAATGGTGAACATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTCTCTTCCAGCTCTTCATTGGCCCCGTCAATTTCAAGAACCTTTTTCAAAAGCGGAAGCGCTTCTTTCTGCAGGCCTTCTTCTAATAAGAAGCTTGCGTATTCGTATAAGAAATCTCTGTCCTCCCGGTAGTGAAGAAAGGCAGCCTCAAAGGATTGTTTTGCTTTCTCGTATTGCTCTAATTCGGTATATGCACTTGCAA > CP006881/2184163‑2184429 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |