| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,184,302 | G→A | G388G (GGC→GGT) | U712_10945 ← | TPR repeat‑containing protein ypiA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,184,302 | 0 | G | A | 99.1% | 342.5 / NA | 114 | G388G (GGC→GGT) | U712_10945 | TPR repeat‑containing protein ypiA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (39/73); minor base C (1/0); total (41/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 114 total aligned reads displayed.
GTTCCACATGAATGGTGAACATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTCTCTTCCAGCTCTTCATTGGCCCCGTCAATTTCAAGAACCTTTTTCAAAAGCGGAAGCGCTTCTTTCTGCAGGCCTTCTTCTAATAAGAAGCTTGCGTATTCGTATAAGAAATCTCTGTCCTCCCGGTAGTGAAGAAAGGCAGCCTCAAAGGATTGTTTTGCTTTCTCGTATTGCTCTAATTCGGTATATGCACTTGCAA > CP006881/2184166‑2184429 | gTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc > 1:130821/1‑139 (MQ=255) ttCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcca > 5:166646/1‑138 (MQ=255) ttCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc < 6:324537/138‑1 (MQ=255) ttCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc < 6:254023/138‑1 (MQ=255) ttCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc < 6:11637/138‑1 (MQ=255) ttCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCACCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAACAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc < 5:292323/138‑1 (MQ=255) tCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACctt > 6:61551/1‑139 (MQ=255) tCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACctt > 5:132641/1‑139 (MQ=255) ccACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttc > 3:413278/1‑139 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGTCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACgttct > 4:324404/1‑139 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttct > 2:161552/1‑139 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttct > 8:320234/1‑139 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttat > 5:396748/1‑137 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAAACTTTTTCAAAAGCGCCAGCGCTTCTTTTTGAAGACcttct > 6:292323/1‑139 (MQ=255) acaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCACTTCTTTTTGAAGACcttctt < 4:27267/139‑1 (MQ=255) caTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGACCCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGATGTCAttcttc > 1:91693/1‑139 (MQ=255) caTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttc > 6:27865/1‑136 (MQ=255) caTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttc < 5:27865/136‑1 (MQ=255) caTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCttcttc > 7:61497/1‑139 (MQ=255) caTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCttcttc > 5:78120/1‑139 (MQ=255) aTGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCtaata < 6:133885/139‑1 (MQ=255) aTGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCtaat < 6:132641/138‑1 (MQ=255) aataTTCCTGCTTATCTAGAAAATTCATCCTCGATTCTCAAAATCGTTTCTTCAAGATCTTCATTGGCTCCGTCAATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATaggaag < 8:248370/135‑1 (MQ=255) aataTTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGc > 1:298027/4‑139 (MQ=255) ccTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGt > 8:209706/1‑139 (MQ=255) ccTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCGTTTTTAAGCCCTTCTTCTAATAGGCAGCTTGCGt > 6:40839/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATATGAAGCTAGCGTa > 1:97356/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 3:400731/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 7:220970/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 5:72509/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 1:246370/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 2:51188/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa < 8:297996/139‑1 (MQ=255) tGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGTAGACCTTCTTATAATAGGAAGATTGCGTAt > 2:228769/1‑139 (MQ=255) tGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTAt > 7:159428/1‑139 (MQ=255) tGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTAt > 3:8518/1‑139 (MQ=255) aTCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTca < 8:61497/137‑2 (MQ=255) tCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCAta < 6:327201/138‑1 (MQ=255) gAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAg < 4:389953/138‑1 (MQ=255) gAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGa < 7:209706/139‑1 (MQ=255) gAAAATTCATCCTCGATTCGCAAAATCGGTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGa < 1:141137/139‑1 (MQ=255) ttCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAAtc > 5:358829/1‑138 (MQ=255) ccTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtc > 3:374265/1‑139 (MQ=255) gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTTTAtcctcc < 8:166241/139‑1 (MQ=255) gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcctcc < 5:158897/139‑1 (MQ=255) gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcctcc < 1:101272/139‑1 (MQ=255) gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcctcc < 1:82743/139‑1 (MQ=255) ttCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCg < 1:161552/139‑1 (MQ=255) tCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCg < 4:298776/138‑1 (MQ=255) gCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTa < 6:72509/139‑1 (MQ=255) cAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTaa < 7:375965/139‑2 (MQ=255) cAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTaa < 4:413278/139‑2 (MQ=255) ctTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAgg < 3:442939/138‑1 (MQ=255) ctTCAAGCTCTTCATTGGCTCCGTCAATTTCAAGAACCTTTTTCAACAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAgg < 2:404835/138‑1 (MQ=255) caaGCTGTTCATTGGCTCCGTCCATTTCAACAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 3:320457/134‑1 (MQ=255) caaGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 3:130295/134‑1 (MQ=255) caaGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 4:400731/134‑1 (MQ=255) ctctTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCa < 1:185562/139‑1 (MQ=255) ctctTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCa < 8:159428/139‑1 (MQ=255) ttCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCttcttc < 1:323281/69‑1 (MQ=255) ttCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCttcttc > 2:323281/1‑69 (MQ=255) ttCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGa < 5:72716/98‑1 (MQ=255) ttCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGa > 6:72716/1‑98 (MQ=255) cATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCa < 4:58849/134‑1 (MQ=255) cATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAACATGCGAATTCATATAATAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGa > 1:269147/1‑139 (MQ=255) aTTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGAt < 5:428419/139‑1 (MQ=255) ctccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGttt > 6:338481/3‑139 (MQ=255) ccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTg < 2:130821/139‑1 (MQ=255) ccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTg > 5:371636/1‑139 (MQ=255) ccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCGTCGTTTTGAAGACCTTCTTCTAATAGGAAGCGTGGGTATTGATATAAGAAATCTCTATAATCCCGGGTATTAAGATAGGCCCCCTCAAAGGATTGTTTTg > 6:45026/1‑139 (MQ=255) cttCAATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGTAGACGTTGTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATGCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTg < 7:208676/136‑1 (MQ=255) cGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTg < 6:358829/138‑1 (MQ=255) gTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCt > 5:161007/1‑139 (MQ=255) caTTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCttcc < 8:192001/138‑3 (MQ=255) caTTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCttcc < 7:20332/138‑3 (MQ=255) ttaaaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 2:135097/108‑1 (MQ=255) ttCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc > 1:135097/1‑111 (MQ=255) cAAGAACCTTTTTCAAACGCTGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGt < 8:80190/138‑1 (MQ=255) aataaCCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt < 1:419794/136‑1 (MQ=255) aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt < 5:40839/139‑1 (MQ=255) aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt < 5:338481/139‑1 (MQ=255) aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt < 1:33088/139‑1 (MQ=255) aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt < 3:301786/139‑1 (MQ=255) aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt < 1:374414/139‑1 (MQ=255) aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt < 4:8518/139‑1 (MQ=255) aGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAtt > 2:364166/1‑139 (MQ=255) gAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTg > 7:5244/1‑139 (MQ=255) gAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTg > 2:311245/1‑139 (MQ=255) ccTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGctc < 3:156419/139‑1 (MQ=255) tttCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTaa < 1:371570/138‑1 (MQ=255) tttCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTaa < 7:320234/138‑1 (MQ=255) tttCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTaa < 1:228769/138‑1 (MQ=255) tCAATAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt < 7:362031/138‑1 (MQ=255) tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt < 7:444010/138‑1 (MQ=255) tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt < 4:374265/138‑1 (MQ=255) tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt < 8:220970/138‑1 (MQ=255) tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt < 6:185317/138‑1 (MQ=255) gcgcTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCt < 7:209192/139‑1 (MQ=255) ctttttGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCaa < 6:396748/138‑1 (MQ=255) ctttttGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCaa < 5:144778/138‑1 (MQ=255) | GTTCCACATGAATGGTGAACATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTCTCTTCCAGCTCTTCATTGGCCCCGTCAATTTCAAGAACCTTTTTCAAAAGCGGAAGCGCTTCTTTCTGCAGGCCTTCTTCTAATAAGAAGCTTGCGTATTCGTATAAGAAATCTCTGTCCTCCCGGTAGTGAAGAAAGGCAGCCTCAAAGGATTGTTTTGCTTTCTCGTATTGCTCTAATTCGGTATATGCACTTGCAA > CP006881/2184166‑2184429 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |