Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,184,347	G→A	D373D (GAC→GAT)	U712_10945 ←	TPR repeat‑containing protein ypiA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,184,347	0	G	A	100.0%	275.0 / NA	87	D373D (GAC→GAT)	U712_10945	TPR repeat‑containing protein ypiA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (24/63);  total (24/63)

CCTCGATTCGCAAAATCGTCTCTTCCAGCTCTTCATTGGCCCCGTCAATTTCAAGAACCTTTTTCAAAAGCGGAAGCGCTTCTTTCTGCAGGCCTTCTTCTAATAAGAAGCTTGCGTATTCGTATAAGAAATCTCTGTCCTCCCGGTAGTGAAGAAAGGCAGCCTCAAAGGATTGTTTTGCTTTCTCGTATTGCTCTAATTCGGTATATGCACTTGCAAGATACCAATTGTATTTCGGATCTTCTTCCCCATAGCCGCGCACCTCTTGAA  >  CP006881/2184211‑2184480                                                                                                                                         |                                                                                                                                      ccTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtc                                                                                                                                     >  3:374265/1‑139 (MQ=255)     gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTTTAtcctcc                                                                                                                                 <  8:166241/139‑1 (MQ=255)     gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcctcc                                                                                                                                 <  1:101272/139‑1 (MQ=255)     gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcctcc                                                                                                                                 <  1:82743/139‑1 (MQ=255)     gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcctcc                                                                                                                                 <  5:158897/139‑1 (MQ=255)     gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcct                                                                                                                                   <  1:51188/137‑1 (MQ=255)       ttCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCg                                                                                                                               <  1:161552/139‑1 (MQ=255)        tCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCg                                                                                                                               <  4:298776/138‑1 (MQ=255)          gCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTa                                                                                                                            <  6:72509/139‑1 (MQ=255)           cAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTaa                                                                                                                           <  7:375965/139‑2 (MQ=255)           cAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTaa                                                                                                                           <  4:413278/139‑2 (MQ=255)                      ctTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAgg                                                                                                                 <  3:442939/138‑1 (MQ=255)                      ctTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAgg                                                                                                                 <  1:250577/138‑1 (MQ=255)                      ctTCAAGCTCTTCATTGGCTCCGTCAATTTCAAGAACCTTTTTCAACAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAgg                                                                                                                 <  2:404835/138‑1 (MQ=255)                         caaGCTGTTCATTGGCTCCGTCCATTTCAACAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc                                                                                                                <  3:320457/134‑1 (MQ=255)                         caaGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc                                                                                                                <  3:130295/134‑1 (MQ=255)                         caaGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc                                                                                                                <  4:400731/134‑1 (MQ=255)                         caaGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc                                                                                                                <  2:298027/134‑1 (MQ=255)                             ctctTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCa                                                                                                         <  1:185562/139‑1 (MQ=255)                             ctctTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCa                                                                                                         <  8:159428/139‑1 (MQ=255)                             ctagtCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGTCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCa                                                                                                         <  6:24620/135‑1 (MQ=255)                                  cATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCa                                                                                                         <  4:58849/134‑1 (MQ=255)                                  cATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAACATGCGAATTCATATAATAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGa                                                                                                    >  1:269147/1‑139 (MQ=255)                                   aTTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGa                                                                                                    <  3:186726/138‑1 (MQ=255)                                   aTTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGAt                                                                                                   <  5:428419/139‑1 (MQ=255)                                        ctccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGttt                                                                                              >  6:338481/3‑139 (MQ=255)                                          ccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTg                                                                                            <  2:130821/139‑1 (MQ=255)                                          ccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTg                                                                                            >  5:371636/1‑139 (MQ=255)                                          ccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCGTCGTTTTGAAGACCTTCTTCTAATAGGAAGCGTGGGTATTGATATAAGAAATCTCTATAATCCCGGGTATTAAGATAGGCCCCCTCAAAGGATTGTTTTg                                                                                            >  6:45026/1‑139 (MQ=255)                                           cttCAATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGTAGACGTTGTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATGCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTg                                                                                            <  7:208676/136‑1 (MQ=255)                                           cGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTg                                                                                            <  6:358829/138‑1 (MQ=255)                                            gTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCt                                                                                          >  5:161007/1‑139 (MQ=255)                                               caTTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCttcc                                                                                       <  8:192001/138‑3 (MQ=255)                                               caTTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCttcc                                                                                       <  7:20332/138‑3 (MQ=255)                                                  ttaaaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc                                                                                                                <  2:135097/108‑1 (MQ=255)                                                  ttCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc                                                                                                                >  1:135097/1‑111 (MQ=255)                                                    cAAGAACCTTTTTCAAACGCTGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGt                                                                                   <  8:80190/138‑1 (MQ=255)                                                     aataaCCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt                                                                                 <  1:419794/136‑1 (MQ=255)                                                     aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt                                                                                 <  3:301786/139‑1 (MQ=255)                                                     aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt                                                                                 <  5:40839/139‑1 (MQ=255)                                                     aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt                                                                                 <  1:33088/139‑1 (MQ=255)                                                     aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt                                                                                 <  4:8518/139‑1 (MQ=255)                                                     aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt                                                                                 <  1:374414/139‑1 (MQ=255)                                                     aaGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt                                                                                 <  5:338481/139‑1 (MQ=255)                                                      aGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAtt                                                                                >  2:364166/1‑139 (MQ=255)                                                       gAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTg                                                                               >  2:311245/1‑139 (MQ=255)                                                       gAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTg                                                                               >  7:5244/1‑139 (MQ=255)                                                         aCCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGct                                                                             <  5:207119/139‑1 (MQ=255)                                                          ccTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGctc                                                                            <  3:156419/139‑1 (MQ=255)                                                              tttCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTaa                                                                         <  1:371570/138‑1 (MQ=255)                                                              tttCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTaa                                                                         <  1:228769/138‑1 (MQ=255)                                                              tttCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTaa                                                                         <  7:320234/138‑1 (MQ=255)                                                              tttCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTaa                                                                         <  7:37335/138‑1 (MQ=255)                                                                tCAATAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt                                                                       <  7:362031/138‑1 (MQ=255)                                                                tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt                                                                       <  7:444010/138‑1 (MQ=255)                                                                tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt                                                                       <  8:220970/138‑1 (MQ=255)                                                                tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt                                                                       <  4:43945/138‑1 (MQ=255)                                                                tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt                                                                       <  6:185317/138‑1 (MQ=255)                                                                tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt                                                                       <  5:61551/138‑1 (MQ=255)                                                                tCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt                                                                       <  4:374265/138‑1 (MQ=255)                                                                            gcgcTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCt                                                          <  7:209192/139‑1 (MQ=255)                                                                                  ctttttGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCaa                                                     <  5:144778/138‑1 (MQ=255)                                                                                  ctttttGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCaa                                                     <  6:396748/138‑1 (MQ=255)                                                                                       tgaagaccTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATAc                                                <  5:45026/132‑1 (MQ=255)                                                                                         aagaccTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATACCaa                                             <  1:134701/135‑1 (MQ=255)                                                                                         aagaccTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATACCaa                                             <  8:5244/135‑1 (MQ=255)                                                                                         aagaccTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATACCaa                                             <  1:364166/135‑1 (MQ=255)                                                                                           gaccTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATACCAAtt                                           <  6:214159/137‑1 (MQ=255)                                                                                            accTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt                                                                       >  2:291676/2‑110 (MQ=255)                                                                                            accTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt                                                                       <  1:291676/109‑1 (MQ=255)                                                                                                        taggaagCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt                                                                       <  2:32544/95‑1 (MQ=255)                                                                                                        taggaagCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATACCAATTGTATTTAGGAtct                              >  5:205642/4‑139 (MQ=255)                                                                                                        taggaagCTTGCGGATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAAtt                                                                       >  1:32544/4‑98 (MQ=255)                                                                                                           gaagCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCttcc                                                                                       >  6:379418/1‑77 (MQ=255)                                                                                                           gaagCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCttcc                                                                                       <  5:379418/79‑3 (MQ=255)                                                                                                           gaagCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAAAGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATACGAATTCTATTTAGGAtcttct                           >  4:154329/1‑139 (MQ=255)                                                                                                               cTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATACCAATTGTATTTAGGATCttcttcac                       >  8:64920/1‑137 (MQ=255)                                                                                                                 tGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATACCAATTGTATTTAGGATCTTCTTcaccg                     >  7:15591/1‑138 (MQ=255)                                                                                                                 tGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATACCAATTGTATTTAGGATCTTCTTcaccg                     >  4:145015/1‑138 (MQ=255)                                                                                                                 tGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATACCAATTGTATTTAGGATCTTCTTcaccg                     >  3:44485/1‑138 (MQ=255)                                                                                                                  gCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATACCAATTGTATTTAGGATCTTCTTcaccg                     <  1:311245/138‑2 (MQ=255)                                                                                                                   cGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATACCAATTGTATTTAGGATCTTCTTcaccg                     >  5:51754/1‑136 (MQ=255)                                                                                                                       ttCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATGGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATACCAATTGTATTTAGGATCTTCTTCACCGTAGctt               >  5:36633/1‑137 (MQ=255)                                                                                                                       ttCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt                                                                                 <  1:72702/73‑1 (MQ=255)                                                                                                                       ttCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTAt                                                                                 >  2:72702/1‑73 (MQ=255)                                                                                                                                    tctcTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATACCAATTGTATTTAGGATCTTCTTCACCGTAGCTTCGAACCTCTTGaa  >  7:68250/1‑139 (MQ=255)                                                                                                                                    tctcTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCTTCCTCGTATTGCTCTAATTCAGTATATGCGCTTGCAAGATACCAATTGTATTTAGGATCTTCTTCACCGTAGCTTCGAACCTCTTGaa  >  1:158907/1‑139 (MQ=255)                                                                                                                                         |                                                                                                                                      CCTCGATTCGCAAAATCGTCTCTTCCAGCTCTTCATTGGCCCCGTCAATTTCAAGAACCTTTTTCAAAAGCGGAAGCGCTTCTTTCTGCAGGCCTTCTTCTAATAAGAAGCTTGCGTATTCGTATAAGAAATCTCTGTCCTCCCGGTAGTGAAGAAAGGCAGCCTCAAAGGATTGTTTTGCTTTCTCGTATTGCTCTAATTCGGTATATGCACTTGCAAGATACCAATTGTATTTCGGATCTTCTTCCCCATAGCCGCGCACCTCTTGAA  >  CP006881/2184211‑2184480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑