Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,172,815	C→G	Q311N (CAG→AAC)	U712_10870 ←	Bifunctional protein BirA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,172,815	0	C	G	100.0%	325.2 / NA	99	Q311N (CAG→AAC)	U712_10870	Bifunctional protein BirA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (46/53);  total (46/53)

TCTATCTATTTTTATAATAGGTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTATACCAACACATTAACCCAATTCAATATCGGCAGAATAGATTTTTTTAATGCCTTCCTGCGTTTCTAAAAGAAGAACGCCTTCATCATCTATACCTAACGCCTTCCCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCGATTCCCAACGCATAACTTTCCCATAAAAGCTTAAT  >  CP006881/2172685‑2172943                                                                                                                                   |                                                                                                                                 tctatctaTTTTAATAATAGGTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTc                                                                                                                          >  5:6514/1‑139 (MQ=255) tctatctaTTTTAATAATAGGTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTc                                                                                                                          >  1:86384/1‑139 (MQ=255)   tatctatTTTAATAATAGGTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCt                                                                                                                         >  7:348032/1‑138 (MQ=255)    atctatTTTAATAATAGGTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTa                                                                                                                        >  4:152175/1‑138 (MQ=255)         ttttaATAATAGGTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAaag                                                                                                                    >  4:299093/1‑137 (MQ=255)           ttaataataGGTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAaagcag                                                                                                                 >  6:7687/4‑138 (MQ=255)           ttaataataGGTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAaagcag                                                                                                                 >  6:46398/4‑138 (MQ=255)           ttaataataGGTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAagcaga                                                                                                                >  5:327899/4‑139 (MQ=255)            taataataGGTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAagcaga                                                                                                                <  7:327136/136‑1 (MQ=255)            taataataGGTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAagcaga                                                                                                                <  2:344800/136‑1 (MQ=255)            taataataGGTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAagcaga                                                                                                                <  8:68532/136‑1 (MQ=255)             aattataGGTGCAGTTCGCAGGCGATACTGACCAATGGAAGTATACCAAAATCAAAGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAgcagaa                                                                                                               <  3:278703/134‑1 (MQ=255)                aataGGTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAACTCCACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGcc                                                                                                           <  8:348065/139‑1 (MQ=255)                   aGGTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCtt                                                                                                         >  2:258321/1‑138 (MQ=255)                    ggTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTtc                                                                                                        <  8:348032/138‑1 (MQ=255)                    ggTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTtc                                                                                                        <  6:148821/138‑1 (MQ=255)                    ggTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTtc                                                                                                        <  6:416625/138‑1 (MQ=255)                     gTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTtcat                                                                                                      <  6:107475/139‑1 (MQ=255)                     gTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTtcat                                                                                                      <  5:7687/139‑1 (MQ=255)                     gTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTtcat                                                                                                      <  5:295181/139‑1 (MQ=255)                        cAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTcatcat                                                                                                   <  7:128845/139‑1 (MQ=255)                           ttCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCta                                                                                                <  2:442336/139‑1 (MQ=255)                                aGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATAcc                                                                                            >  6:199225/1‑138 (MQ=255)                                aGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATAcc                                                                                            >  4:212416/1‑138 (MQ=255)                                aGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATAcc                                                                                            >  1:224885/1‑138 (MQ=255)                                 ggCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTa                                                                                          <  6:54665/139‑1 (MQ=255)                                     aTACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGc                                                                                      >  5:401223/1‑139 (MQ=255)                                            ccAATGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCg                                                                               >  4:300328/1‑139 (MQ=255)                                              aaTGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGt                                                                              >  6:184384/1‑138 (MQ=255)                                                tGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTtca                                                                                                       <  3:193578/111‑1 (MQ=255)                                                tGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTtca                                                                                                       >  4:193578/1‑111 (MQ=255)                                                tGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTaa                                                                            >  4:366947/1‑138 (MQ=255)                                                tGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTaa                                                                            >  1:116984/1‑138 (MQ=255)                                                tGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTaa                                                                            >  1:46896/1‑138 (MQ=255)                                                tGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTaa                                                                            >  2:133899/1‑138 (MQ=255)                                                tGGAAGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTaa                                                                            >  3:381133/1‑138 (MQ=255)                                                    aGTATACCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGt                                                                       >  1:261282/1‑139 (MQ=255)                                                        taCCAAAATCAACGGGCTTGTACCAACACATTAGCCGAATTCGATATCGGCAGAATAGATTTTTTTTATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTACCGCCTTACCGTAAAAGGTTCCg                                                                   >  1:70715/1‑139 (MQ=255)                                                        taCCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCg                                                                   >  1:80615/1‑139 (MQ=255)                                                        taCCAAAATCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCg                                                                   >  6:415100/1‑139 (MQ=255)                                                             aaaTCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTaa                                                              >  8:31948/1‑139 (MQ=255)                                                             aaaTCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTaa                                                              <  8:258908/139‑1 (MQ=255)                                                             aaaTCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTaa                                                              >  6:435752/1‑139 (MQ=255)                                                              aaTCAACGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGACTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAAc                                                             >  4:362792/1‑139 (MQ=255)                                                                    cGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTg                                                       <  3:300328/139‑1 (MQ=255)                                                                    cGGGCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTg                                                       >  5:85116/1‑139 (MQ=255)                                                                      ggCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGc                                                     <  8:11247/139‑1 (MQ=255)                                                                      ggCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGc                                                     <  6:85116/139‑1 (MQ=255)                                                                      ggCTTGTACCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGCTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGc                                                     <  3:277883/139‑1 (MQ=255)                                                                           gtaCCAACACATTAGCCCAATTCGATCTCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGctct                                                  <  2:133228/136‑1 (MQ=255)                                                                           gtaCCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGctct                                                  <  8:365520/136‑1 (MQ=255)                                                                            taCCAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCa                                                >  3:345951/1‑138 (MQ=255)                                                                               cAACACATTATCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATAtt                                            <  6:23366/139‑1 (MQ=255)                                                                               cAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATAtt                                            <  5:46398/139‑1 (MQ=255)                                                                               cAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATAtt                                            <  5:435752/139‑1 (MQ=255)                                                                               cAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATAtt                                            <  1:258321/139‑1 (MQ=255)                                                                               cAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATAtt                                            <  2:69177/139‑1 (MQ=255)                                                                               cAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATAtt                                            <  6:6514/139‑1 (MQ=255)                                                                               cAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATAtt                                            <  4:388515/139‑1 (MQ=255)                                                                               cAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATAtt                                            <  4:381133/139‑1 (MQ=255)                                                                               cAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATAtt                                            <  3:299093/139‑1 (MQ=255)                                                                               cAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATAtt                                            <  3:366947/139‑1 (MQ=255)                                                                               cAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATAtt                                            <  3:418560/139‑1 (MQ=255)                                                                               cAACACATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGGTCCGTTTAACGTTCTGGCTCTCATAtt                                            <  2:86384/139‑1 (MQ=255)                                                                                 acacATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTtc                                                                                                        <  5:106402/77‑1 (MQ=255)                                                                                 acacATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTtc                                                                                                        >  6:106402/1‑77 (MQ=255)                                                                                 acacATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCt                                                                                    >  5:436746/1‑97 (MQ=255)                                                                                 acacATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAg                                          >  3:426717/1‑139 (MQ=255)                                                                                 acacATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAg                                          <  7:31948/139‑1 (MQ=255)                                                                                 acacATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACATAACGCCt                                                                                    <  6:436746/97‑1 (MQ=255)                                                                                 acacATTAGCCCAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGAAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAg                                          <  4:326242/139‑1 (MQ=255)                                                                                          cccAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTtca                                                                                                       >  2:147804/1‑69 (MQ=255)                                                                                          cccAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTtca                                                                                                       <  1:147804/69‑1 (MQ=255)                                                                                          cccAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAAtac                                 >  2:32325/1‑137 (MQ=255)                                                                                           ccAATTCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAATAcc                                <  6:327899/139‑1 (MQ=255)                                                                                               ttCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGtt                                                                      <  7:381808/97‑1 (MQ=255)                                                                                               ttCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGtt                                                                      >  8:381808/1‑97 (MQ=255)                                                                                               ttCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTgg                                                      <  8:206004/113‑1 (MQ=255)                                                                                               ttCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTgg                                                      >  7:206004/1‑113 (MQ=255)                                                                                               ttCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATAtt                                            <  6:287163/123‑1 (MQ=255)                                                                                               ttCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATAtt                                            >  3:81323/1‑123 (MQ=255)                                                                                               ttCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATAtt                                            <  4:81323/123‑1 (MQ=255)                                                                                               ttCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATAtt                                            >  5:287163/1‑123 (MQ=255)                                                                                               ttCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAATAccgagc                            >  1:332920/1‑135 (MQ=255)                                                                                               ttCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAATAccgagc                            >  7:94125/1‑135 (MQ=255)                                                                                               ttCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAATAccgagc                            >  2:285347/1‑135 (MQ=255)                                                                                               ttCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAATAccgagc                            >  1:365564/1‑135 (MQ=255)                                                                                               ttCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAATAcc                                >  3:11944/1‑135 (MQ=255)                                                                                               ttCGATATCGGCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAATAcc                                <  4:11944/135‑1 (MQ=255)                                                                                                         gCAGAATAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAATACCGAGCGCATAGCttt                  >  1:247455/1‑139 (MQ=255)                                                                                                               tAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAATACCGAGCGCATAGCTTTCCCATa            <  8:94125/139‑1 (MQ=255)                                                                                                               tAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAATACCGAGCGCATAGCTTTCCCATa            <  6:401223/139‑1 (MQ=255)                                                                                                               tAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAATACCGAGCGCATAGCTTTCCCATa            <  5:184384/139‑1 (MQ=255)                                                                                                               tAGATTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAATACCGAGCGCATAGCTTTCCCATa            <  1:133899/139‑1 (MQ=255)                                                                                                                  aTTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCt                                                                                    >  8:180347/1‑64 (MQ=255)                                                                                                                  aTTTTTTTAATGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCt                                                                                    <  7:180347/64‑1 (MQ=255)                                                                                                                          aaTGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAATACCGAGCGCATAGCTTTCCCATAAAAGCTTAAt  <  4:426717/138‑1 (MQ=255)                                                                                                                          aaTGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAATACCGAGCGCATAGCTTTCCCATAAAAGCTTAAt  <  4:345951/138‑1 (MQ=255)                                                                                                                          aaTGCCTTCGTTCGTTTCTAAAAGCAGAACGCCTTCATCATCTATACCTAACGCCTTACCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCAATACCGAGCGCATAGCTTTCCCATAAAAGCTTAAt  <  1:285347/138‑1 (MQ=255)                                                                                                                                   |                                                                                                                                 TCTATCTATTTTTATAATAGGTGCAGTTCGCAGGCGATACTGCCCAATGGAAGTATACCAAAATCAACGGGCTTATACCAACACATTAACCCAATTCAATATCGGCAGAATAGATTTTTTTAATGCCTTCCTGCGTTTCTAAAAGAAGAACGCCTTCATCATCTATACCTAACGCCTTCCCGTAAAAGGTTCCGTTTAACGTTCTGGCTCTCATATTAGTGCCGATTCCCAACGCATAACTTTCCCATAAAAGCTTAAT  >  CP006881/2172685‑2172943

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑