| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,184,596 | A→C | D290E (GAT→GAG) | U712_10945 ← | TPR repeat‑containing protein ypiA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,184,596 | 0 | A | C | 99.0% | 313.1 / ‑4.4 | 96 | D290E (GAT→GAG) | U712_10945 | TPR repeat‑containing protein ypiA |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base C (56/39); total (56/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.29e-01 | |||||||||||
GCGCACCTCTTGAATAAGATCAATGATCTGTTCATAATCCTCTTCTTTATGATACACGGCAAGAAGTGTATGAAGTGCCTCGACGAAGCCCGGATCAAGTGCAAGCGCCTCCTGAAGCAGCTGTTTCCCATCTTCTGACTTCCCGATTTTTAAAGCCATTTTTGCGGCATAGAGGAAAAGCTCTTTGTTATATTCATCATATCTGATACCCTCTTTTGCCGTTTTTAATGCCTCTTCATACATCCCTTCAGCTTCATAGCTTTT > CP006881/2184467‑2184730 | tcgaaCCTCTTGAATAAGATCAATGATCTGATCATAATCCTCTTCTTTGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGAc > 8:308360/5‑139 (MQ=255) aaCCTCTTGAATAAGATCAATGATCTGATCATAATCCTCTTCTTTGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTc > 6:61217/2‑139 (MQ=255) ctTGAATAAGATCAATGATCTGATCATAATCCTCTTCTTTGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGAt > 6:33500/1‑139 (MQ=255) ctTGAATAAGATCAATGATCTGATCATAATCCTCTTCTTTGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGAt > 6:343936/1‑139 (MQ=255) gATCAATGATCTGATCATAATCCTCTTCTTTGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGc > 3:274149/1‑139 (MQ=255) aTCAATGATCTGATCATAATCCTCTTCTTTGTGATACACGGCAAGAAGTGTATGAAGAGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCACTCTTCTGACTTCCCGATTTTCAAGGc > 3:436280/1‑138 (MQ=255) aTGATCTGATCATAATCCTCTTCTCTGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCAttt > 4:60296/1‑139 (MQ=255) tgatCATAATCCTCTTCTTTGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTAGGCgg > 3:269219/4‑139 (MQ=255) tgatCATAATCCTCTTCTTTGTGATACACGGCAAGAAGTGCATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCgg > 6:281785/4‑139 (MQ=255) atCATAATCCTCTTCTTTGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCa > 2:331996/2‑139 (MQ=255) atCATAATCCTCTTCTTTGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCAGATTTTCAAGGCCATTTTGGCGGCa > 2:335661/2‑139 (MQ=255) aacATAAAACTCTTCTATGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAACCAGCTTCTTCCCCACTTCTGACTTCCCGATAATCAAGGCCATTTTGGcctc > 4:395378/3‑135 (MQ=255) aaTCCTCTTCTTTGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATaaag > 1:390073/1‑139 (MQ=255) aaTCCTCTTCTTTGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATaaag > 7:84518/1‑139 (MQ=255) aaTCCTCTTCTTCGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATaaag > 3:307000/1‑139 (MQ=255) tcttctTTGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGaa > 1:169791/1‑137 (MQ=255) ttcttTGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAgt > 1:173824/1‑138 (MQ=255) cttTGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAgtt < 1:155976/138‑3 (MQ=255) cttTGTCATACACGGCAAGAAGTGTTTGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAgtt < 4:436280/138‑3 (MQ=255) ctctgtGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAg < 3:60296/131‑1 (MQ=255) tttGTGATACACGGCATGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGGTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGttct < 7:424916/139‑1 (MQ=255) tttGTGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGttct < 8:84518/139‑1 (MQ=255) ttgtGATAGACGGCAAGTAGTGTATGACGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGttct < 4:269219/135‑1 (MQ=255) tgtGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCaagg < 6:402140/106‑3 (MQ=255) tgtGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCaagg > 5:402140/3‑106 (MQ=255) tgtGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGttct < 1:331996/135‑1 (MQ=255) tgtGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGttct < 6:428500/135‑1 (MQ=255) tgtGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGttct < 1:26531/135‑1 (MQ=255) tgtGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGttct < 4:61902/135‑1 (MQ=255) tgtGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCttt > 1:358401/3‑139 (MQ=255) tgtGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCttt > 3:279970/3‑139 (MQ=255) tgtGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCttt > 8:389148/3‑139 (MQ=255) tgtGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCttt > 4:392644/3‑139 (MQ=255) tGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTg < 5:279078/138‑1 (MQ=255) tGATACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTg < 2:358401/138‑1 (MQ=255) aTACACGGCAAGAAGTGTATTAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAACCAGCATCTTCCCCTCATCTGACTTCCCGATTTTCAATGCCATTTTGGCGGCATAAATGAAAAGTTCtttttt > 2:155976/1‑138 (MQ=255) aTACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGtt < 1:144671/138‑1 (MQ=255) aTACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACGTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTta > 2:335675/1‑139 (MQ=255) tACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTta > 5:432590/1‑138 (MQ=255) tACACGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTta > 7:325552/1‑138 (MQ=255) acacGGCAAGAAGTGTAGGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTtata < 6:161007/139‑1 (MQ=255) ctcGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTtata < 5:91966/136‑1 (MQ=255) cacGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTtata < 8:15591/138‑1 (MQ=255) cacGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTtata < 4:274149/138‑1 (MQ=255) cacGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTtata < 5:172557/138‑1 (MQ=255) cacGGCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTatat > 4:153469/1‑139 (MQ=255) ggCAAGAGGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTACCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTAatatac > 3:218665/1‑136 (MQ=255) ggCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAgtt < 2:61778/125‑3 (MQ=255) ggCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAgtt > 1:61778/1‑123 (MQ=255) gCAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATtcat < 6:394442/139‑1 (MQ=255) cAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATtcat > 8:419186/1‑138 (MQ=255) cAAGAAGTGTATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATtcat > 5:190837/1‑138 (MQ=255) tgtATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTg < 5:61217/139‑1 (MQ=255) gtATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTGCCGATTTTCAAGGCCCTTTTGGCGTCATAAAGGAAAAGTTCTTTGTAATATTCATCATATCTGa > 3:432506/1‑139 (MQ=255) tATGAAGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGAt > 5:35821/1‑139 (MQ=255) tGAAGTGCCTCGACGAAGCCCGGATCAAGTGCAAGCGCCTCCTGAAGCAGCTGTTTCCCATCTTCTGACTTCCCGATTTTTAAAGCCATTTTTGCGGCATAGAGGAAAAGCTCTTTGTTATATTCATCATATCTGATa < 7:390151/138‑1 (MQ=255) aaGCGCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATccc < 5:33500/138‑1 (MQ=255) agcgCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATtcat > 5:441616/4‑124 (MQ=255) agcgCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATtcat < 6:441616/121‑1 (MQ=255) agcgCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCct > 7:254009/4‑139 (MQ=255) gcgCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCctc > 7:216032/3‑139 (MQ=255) gCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGtt > 7:363579/1‑113 (MQ=255) gCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGtt < 8:363579/113‑1 (MQ=255) gCCTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTAGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATccccgcgt > 5:1767/1‑135 (MQ=255) cTCGACAAAGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCtttt > 6:200098/1‑139 (MQ=255) aGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCGTTTTGGCGGCATAAAGGAAAAGTTCTTTGTtata < 7:224783/106‑1 (MQ=255) aGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCGTTTTGGCGGCATAAAGGAAAAGTTCTTTGTtata > 8:224783/1‑106 (MQ=255) aGCCCGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGtttt > 7:181719/1‑139 (MQ=255) cccGGATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGttttt > 4:209365/1‑138 (MQ=255) ggATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATg > 7:177759/1‑139 (MQ=255) ggATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATg < 6:190837/139‑1 (MQ=255) ggATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATg < 6:414311/139‑1 (MQ=255) ggATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGGTTTTAATg < 5:397739/139‑1 (MQ=255) ggATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCCTCCCCTCTTCTGACTTCCCGATTATCAAGGCCAATTTGGCGGCATATAGGAAAAGTTCTATGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATg < 1:183455/139‑1 (MQ=255) gATCAAGCGCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGc < 4:215357/139‑1 (MQ=255) aagcgcaagcgcCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCctc < 5:281785/138‑1 (MQ=255) agcgCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGAtc < 7:323718/108‑2 (MQ=255) agcgCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGAGTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGAtc > 8:323718/4‑110 (MQ=255) gcgCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCtt > 3:75359/3‑138 (MQ=255) gcgCAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCtt > 7:400757/3‑138 (MQ=255) cAAGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGTCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCTTCATa < 6:55950/139‑1 (MQ=255) aGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCTTCATACa < 6:35821/139‑1 (MQ=255) aGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCTTCATACa < 3:392644/139‑1 (MQ=255) aGCGCCTCCTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCTTCATACa < 8:254009/139‑1 (MQ=255) aGCGCCTACTGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCGATTTTGGCGGCATAAAGGAAAAGTTCTGTGTTATATTCATCATATCTGATCCACTCTTTTGCAGATTTTAATGCCTCTTCATAc > 6:138193/1‑138 (MQ=255) tcctGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCTTCATACATTCCt > 3:252884/1‑138 (MQ=255) tcctGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCTTCATACATTCCt > 5:3604/1‑138 (MQ=255) tcctGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTAGATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCTTCATACATTCCtt > 5:279585/1‑139 (MQ=255) cctGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCTTCATACATTCCTTc < 8:68250/139‑1 (MQ=255) ctGAAGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCTTCATACATTCCtt < 8:400757/137‑1 (MQ=255) aaGCAGCTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCTTCATACATTCCTTCAGCt > 5:200035/1‑139 (MQ=255) gcagcTTCTTCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCTTCATACATTCCTTCAGCtt > 8:146108/1‑138 (MQ=255) gcttcttCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCTTCATACATTCCTTCAGCTTCa > 4:393684/6‑137 (MQ=255) cttcttCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCTTCATACATTCCTTCAGCTTCATAg > 1:78455/5‑139 (MQ=255) cttcttCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCATTTGCCGTTTTTAATGCATAATCATACATTACTTCAGCTTCATAg > 1:331226/5‑139 (MQ=255) tCCCCTCTTCTGACTTCCCGATTTTCAAGGCCATTTTGGCGGCATAAAGGAAAAGTTCTTTGTTATATTCATCATATCTGATCCCCTCTTTTGCCGTTTTTAATGCCTCTTCATACATTCCTTCAGCTTCATAGCtttt > 4:214903/1‑139 (MQ=255) | GCGCACCTCTTGAATAAGATCAATGATCTGTTCATAATCCTCTTCTTTATGATACACGGCAAGAAGTGTATGAAGTGCCTCGACGAAGCCCGGATCAAGTGCAAGCGCCTCCTGAAGCAGCTGTTTCCCATCTTCTGACTTCCCGATTTTTAAAGCCATTTTTGCGGCATAGAGGAAAAGCTCTTTGTTATATTCATCATATCTGATACCCTCTTTTGCCGTTTTTAATGCCTCTTCATACATCCCTTCAGCTTCATAGCTTTT > CP006881/2184467‑2184730 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |