Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,185,250 A→G F72F (TTT→TTC)  U712_10945 ← TPR repeat‑containing protein ypiA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,185,2500AG100.0% 353.7 / NA 107F72F (TTT→TTC) U712_10945TPR repeat‑containing protein ypiA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (44/63);  total (44/63)

Only 100 of 109 total aligned reads displayed.

ACCCCTGCATCTGGTAAAGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTATCCGGAATGGTTTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAAAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAAATCACTGATTAGTGAAATCGCTTTTTCTACATTGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTGTCTTCATCATAGAGCTGATTTTCA  >  CP006881/2185120‑2185385
                                                                                                                                  |                                                                                                                                       
aCCCCTGCATCTGATAAAGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGt                                                                                                                                 >  7:441220/1‑139 (MQ=255)
     tGCATCTGATAAAGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGtt                                                                                                                            >  1:410547/1‑139 (MQ=255)
     tGCATCTGATAAAGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGtt                                                                                                                            >  2:386249/1‑139 (MQ=255)
       cATCTGATAAAGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCt                                                                                                                          >  3:10404/1‑139 (MQ=255)
           tgatAAAGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGt                                                                                                                        <  4:284552/134‑1 (MQ=255)
            gatAAAGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGt                                                                                                                                 <  8:411978/125‑1 (MQ=255)
            gatAAAGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGt                                                                                                                                 >  7:411978/3‑127 (MQ=255)
            gatAAAGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGttt                                                                                                                      >  3:219918/3‑138 (MQ=255)
            gatAAAGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGttt                                                                                                                      >  3:298004/3‑138 (MQ=255)
            gatAAAGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGttt                                                                                                                      >  4:382741/3‑138 (MQ=255)
                aaGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCAttt                                                                                                                 <  2:354666/139‑1 (MQ=255)
                aaGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCAtt                                                                                                                  <  5:88523/138‑1 (MQ=255)
                aaGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCAtt                                                                                                                  <  7:2461/138‑1 (MQ=255)
                aaGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCAtt                                                                                                                  <  3:36139/138‑1 (MQ=255)
                aaGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCAtt                                                                                                                  <  3:303288/138‑1 (MQ=255)
                   aTCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGa                                                                                                              <  2:385043/139‑1 (MQ=255)
                   aTCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTAATAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGa                                                                                                              <  4:143910/139‑1 (MQ=255)
                     ccGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGata                                                                                                            >  7:291935/1‑139 (MQ=255)
                      cGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGACAGTTCTGTTTCATTTGGata                                                                                                            >  5:287601/1‑138 (MQ=255)
                       gCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGatat                                                                                                           >  8:232366/1‑138 (MQ=255)
                        ccATAAGCAGCAAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATaa                                                                                                         <  8:291935/139‑1 (MQ=255)
                                agcaAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTa                                                                                                 <  2:426452/139‑1 (MQ=255)
                                agcaAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTa                                                                                                 <  4:314101/139‑1 (MQ=255)
                                agcaAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTa                                                                                                 <  8:441220/139‑1 (MQ=255)
                                  caAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTagaaa                                                                                                                                      >  8:48447/1‑100 (MQ=255)
                                  caAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTagaaa                                                                                                                                      <  7:48447/100‑1 (MQ=255)
                                  caAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATg                                                                                                   >  1:126281/1‑135 (MQ=255)
                                  caAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATg                                                                                                   >  1:424378/1‑135 (MQ=255)
                                  caAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATg                                                                                                   >  5:446153/1‑135 (MQ=255)
                                  caAACTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATg                                                                                                   >  5:439850/1‑135 (MQ=255)
                                   aaaCTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGAt                                                                                              <  3:273721/139‑1 (MQ=255)
                                   aaaCTTTCAGGATATGATTGAGCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTGTTTCTTCTTCGTCAATATCTATTAAAAGTTCATCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGAt                                                                                              <  6:65413/139‑1 (MQ=255)
                                     aCTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCa                                                                                            <  4:219918/139‑1 (MQ=255)
                                     aCTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCa                                                                                            <  4:298004/139‑1 (MQ=255)
                                     aCTTTCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCa                                                                                            <  4:115172/139‑1 (MQ=255)
                                         tCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACta                                                                                         <  1:30840/138‑2 (MQ=255)
                                         tCCGGATATGATGGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCAGGTAGATCACta                                                                                         <  8:175004/138‑2 (MQ=255)
                                                 tgatgGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGa                                                                                 >  4:179743/1‑138 (MQ=255)
                                                    tgGATCTGTTTCCGGAATAGTCACCAGCACAGCGAGGGCCTTTTCTTCTTCCTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTAGGATATAAATCATGTAGATCACTAATCAGTGAAAtg                                                                             <  8:168017/139‑2 (MQ=255)
                                                      gATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGc                                                                           <  4:434456/139‑1 (MQ=255)
                                                      gATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGc                                                                           <  6:446153/139‑1 (MQ=255)
                                                      gATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGc                                                                           <  6:439850/139‑1 (MQ=255)
                                                       aTCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCt                                                                          >  1:54844/1‑139 (MQ=255)
                                                                cGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACa                                                                 <  4:211510/139‑1 (MQ=255)
                                                                 ggAATTGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACAt                                                                <  6:422229/139‑1 (MQ=255)
                                                                 ggAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACAt                                                                <  8:175814/139‑1 (MQ=255)
                                                                      agtctCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGccc                                                           >  4:139910/5‑139 (MQ=255)
                                                                       gtctCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGccc                                                           <  4:10404/135‑1 (MQ=255)
                                                                        tctCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTa                                                                                                 >  6:215001/3‑99 (MQ=255)
                                                                        tctCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTa                                                                                                 <  5:215001/97‑1 (MQ=255)
                                                                            cAGGACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCTGTTCTGTTTGATTTGGTTATTAATCATGTAGATCACTAATCACTGAAATGGCTTTATCTACATCGCCCCCCt                                                       <  1:437522/137‑1 (MQ=255)
                                                                            cAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                       <  7:69280/137‑1 (MQ=255)
                                                                            cAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                       <  6:322112/137‑1 (MQ=255)
                                                                            cAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                       <  3:382741/137‑1 (MQ=255)
                                                                                 caGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGATATGGCTTTTTCTACATCGCCCCACTCGtaat                                                 >  1:373559/1‑138 (MQ=255)
                                                                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGTATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGtaata                                                >  8:332189/1‑138 (MQ=255)
                                                                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCa                                                                                            <  6:396347/94‑1 (MQ=255)
                                                                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCa                                                                                            >  5:396347/1‑94 (MQ=255)
                                                                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACa                                                                 <  3:357343/121‑1 (MQ=255)
                                                                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                       >  6:245209/1‑131 (MQ=255)
                                                                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                       <  5:245209/131‑1 (MQ=255)
                                                                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGtaata                                                >  7:168063/1‑138 (MQ=255)
                                                                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATAACTAATCAGTGAAATGGCTTTTTCTACa                                                                 >  4:357343/1‑121 (MQ=255)
                                                                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTAATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGtaata                                                >  7:158866/1‑138 (MQ=255)
                                                                                    cGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGt                                                                                                                                 <  1:332811/55‑1 (MQ=255)
                                                                                    cGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGt                                                                                                                                 >  2:332811/1‑55 (MQ=255)
                                                                                    cGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGcc                                                            <  6:220150/124‑1 (MQ=255)
                                                                                    cGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGcc                                                            >  5:220150/1‑124 (MQ=255)
                                                                                      aGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCt                                           >  6:380148/1‑139 (MQ=255)
                                                                                      aGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTGTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTGTTCTACCTCGCCCCACTCGTAATAAAGCt                                           >  4:279535/1‑139 (MQ=255)
                                                                                       gggCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTa                                                                                                 >  3:183224/1‑84 (MQ=255)
                                                                                       gggCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTa                                                                                                 <  4:183224/84‑1 (MQ=255)
                                                                                         gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGGGTAGTAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCTCTCGTAATAAAGCTggg                                        <  5:71859/139‑1 (MQ=255)
                                                                                         gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                        <  6:211733/139‑1 (MQ=255)
                                                                                         gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                        >  6:406157/1‑139 (MQ=255)
                                                                                         gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                        <  3:179743/139‑1 (MQ=255)
                                                                                         gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                        <  7:232366/139‑1 (MQ=255)
                                                                                         gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                        >  4:186039/1‑139 (MQ=255)
                                                                                         gCTTTTTCTTCTTCGTCAATATCTATTAAAAGGTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                        <  8:445210/139‑1 (MQ=255)
                                                                                               tcttcttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCa                                   <  3:300003/138‑1 (MQ=255)
                                                                                               tcttcttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCa                                   <  1:386249/138‑1 (MQ=255)
                                                                                               tcttcttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCa                                   <  2:410547/138‑1 (MQ=255)
                                                                                               tcttcttcGTCAATATCTAATAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCa                                   <  2:443518/138‑1 (MQ=255)
                                                                                                cttcttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                  <  3:372482/138‑1 (MQ=255)
                                                                                                   cttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                       <  1:69785/114‑1 (MQ=255)
                                                                                                   cttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                       >  2:69785/1‑114 (MQ=255)
                                                                                                   cttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGc                              >  2:428535/1‑139 (MQ=255)
                                                                                                      agTCAATATCTATTAAAAGTTCATCGTAGAAATTCTTCAGTTATGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATAGCCACACTCGTAATAAAGCTGGGCTGAAATGGc                              <  4:101338/135‑1 (MQ=255)
                                                                                                              tCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTtca                    <  5:380148/138‑1 (MQ=255)
                                                                                                                       aGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCt          <  4:150258/139‑1 (MQ=255)
                                                                                                                        gTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTg         >  7:314170/1‑139 (MQ=255)
                                                                                                                          tCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTgtt       >  8:46101/1‑137 (MQ=255)
                                                                                                                           cAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGttt      >  2:51770/1‑139 (MQ=255)
                                                                                                                            aGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGtttt     >  1:80328/1‑139 (MQ=255)
                                                                                                                             gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt    <  8:243480/139‑1 (MQ=255)
                                                                                                                             gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt    <  8:168063/139‑1 (MQ=255)
                                                                                                                             gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt    <  7:57451/139‑1 (MQ=255)
                                                                                                                             gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt    <  5:413042/139‑1 (MQ=255)
                                                                                                                             gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGACCCACTCTTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt    <  1:364426/139‑1 (MQ=255)
                                                                                                                               gTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa  <  7:46101/139‑1 (MQ=255)
                                                                                                                                  |                                                                                                                                       
ACCCCTGCATCTGGTAAAGATCCGCCATAAGCAGCAAACTTTCCGGATATGATGGATCTGTATCCGGAATGGTTTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAAAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAAATCACTGATTAGTGAAATCGCTTTTTCTACATTGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTGTCTTCATCATAGAGCTGATTTTCA  >  CP006881/2185120‑2185385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑