Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,185,298	G→A	I56I (ATC→ATT)	U712_10945 ←	TPR repeat‑containing protein ypiA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,185,298	0	G	A	100.0%	260.8 / NA	82	I56I (ATC→ATT)	U712_10945	TPR repeat‑containing protein ypiA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (35/47);  total (35/47)

TGATGGATCTGTATCCGGAATGGTTTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAAAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAAATCACTGATTAGTGAAATCGCTTTTTCTACATTGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTGTCTTCATCATAGAGCTGATTTTCAGCTTTCGAGAGAGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTC  >  CP006881/2185169‑2185429                                                                                                                                  |                                                                                                                                    tgatgGATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGa                                                                                                                             >  4:179743/1‑138 (MQ=255)    tgGATCTGTTTCCGGAATAGTCACCAGCACAGCGAGGGCCTTTTCTTCTTCCTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTAGGATATAAATCATGTAGATCACTAATCAGTGAAAtg                                                                                                                         <  8:168017/139‑2 (MQ=255)      gATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGc                                                                                                                       <  6:446153/139‑1 (MQ=255)      gATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGc                                                                                                                       <  6:439850/139‑1 (MQ=255)      gATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGc                                                                                                                       <  4:434456/139‑1 (MQ=255)       aTCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCt                                                                                                                      >  1:54844/1‑139 (MQ=255)                cGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACa                                                                                                             <  4:211510/139‑1 (MQ=255)                 ggAATTGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACAt                                                                                                            <  6:422229/139‑1 (MQ=255)                 ggAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACAt                                                                                                            <  8:175814/139‑1 (MQ=255)                      agtctCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGccc                                                                                                       >  4:139910/5‑139 (MQ=255)                       gtctCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGccc                                                                                                       <  4:10404/135‑1 (MQ=255)                            cAGGACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCTGTTCTGTTTGATTTGGTTATTAATCATGTAGATCACTAATCACTGAAATGGCTTTATCTACATCGCCCCCCt                                                                                                   <  1:437522/137‑1 (MQ=255)                            cAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                                                                   <  3:382741/137‑1 (MQ=255)                            cAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                                                                   <  7:69280/137‑1 (MQ=255)                            cAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                                                                   <  6:322112/137‑1 (MQ=255)                                 caGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGATATGGCTTTTTCTACATCGCCCCACTCGtaat                                                                                             >  1:373559/1‑138 (MQ=255)                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGTATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGtaata                                                                                            >  8:332189/1‑138 (MQ=255)                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACa                                                                                                             <  3:357343/121‑1 (MQ=255)                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                                                                   >  6:245209/1‑131 (MQ=255)                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                                                                   <  5:245209/131‑1 (MQ=255)                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGtaata                                                                                            >  7:168063/1‑138 (MQ=255)                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATAACTAATCAGTGAAATGGCTTTTTCTACa                                                                                                             >  4:357343/1‑121 (MQ=255)                                  aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTAATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGtaata                                                                                            >  7:158866/1‑138 (MQ=255)                                    cGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGcc                                                                                                        >  5:220150/1‑124 (MQ=255)                                    cGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGcc                                                                                                        <  6:220150/124‑1 (MQ=255)                                    cGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAg                                                                                         >  3:150258/1‑139 (MQ=255)                                    cGAGGGCTTGTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAg                                                                                         >  7:243480/1‑139 (MQ=255)                                      aGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCt                                                                                       >  6:380148/1‑139 (MQ=255)                                      aGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTGTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTGTTCTACCTCGCCCCACTCGTAATAAAGCt                                                                                       >  4:279535/1‑139 (MQ=255)                                         gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGGGTAGTAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCTCTCGTAATAAAGCTggg                                                                                    <  5:71859/139‑1 (MQ=255)                                         gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                                                                    <  3:179743/139‑1 (MQ=255)                                         gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                                                                    <  6:211733/139‑1 (MQ=255)                                         gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                                                                    >  4:186039/1‑139 (MQ=255)                                         gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                                                                    >  6:406157/1‑139 (MQ=255)                                         gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                                                                    <  7:232366/139‑1 (MQ=255)                                         gCTTTTTCTTCTTCGTCAATATCTATTAAAAGGTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                                                                    <  8:445210/139‑1 (MQ=255)                                               tcttcttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCa                                                                               <  3:300003/138‑1 (MQ=255)                                               tcttcttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCa                                                                               <  2:410547/138‑1 (MQ=255)                                               tcttcttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCa                                                                               <  1:386249/138‑1 (MQ=255)                                               tcttcttcGTCAATATCTAATAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCa                                                                               <  2:443518/138‑1 (MQ=255)                                                cttcttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                              <  3:372482/138‑1 (MQ=255)                                                   cttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                                                                   <  1:69785/114‑1 (MQ=255)                                                   cttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                                                                   >  2:69785/1‑114 (MQ=255)                                                   cttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGc                                                                          >  2:428535/1‑139 (MQ=255)                                                      agTCAATATCTATTAAAAGTTCATCGTAGAAATTCTTCAGTTATGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATAGCCACACTCGTAATAAAGCTGGGCTGAAATGGc                                                                          <  4:101338/135‑1 (MQ=255)                                                              tCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTtca                                                                <  5:380148/138‑1 (MQ=255)                                                                  ttAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTcatcatg                                                           >  8:57451/1‑138 (MQ=255)                                                                     aaaGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTcatcatgcag                                                        <  3:394321/139‑5 (MQ=255)                                                                       aGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCt                                                      <  4:150258/139‑1 (MQ=255)                                                                        gTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTg                                                     >  7:314170/1‑139 (MQ=255)                                                                          tCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTgtt                                                   >  8:46101/1‑137 (MQ=255)                                                                           cAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGttt                                                  >  2:51770/1‑139 (MQ=255)                                                                            aGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGtttt                                                 >  1:80328/1‑139 (MQ=255)                                                                             gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt                                                <  5:413042/139‑1 (MQ=255)                                                                             gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt                                                <  8:168063/139‑1 (MQ=255)                                                                             gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt                                                <  8:243480/139‑1 (MQ=255)                                                                             gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt                                                <  7:57451/139‑1 (MQ=255)                                                                             gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGACCCACTCTTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt                                                <  1:364426/139‑1 (MQ=255)                                                                               gTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa                                              <  7:46101/139‑1 (MQ=255)                                                                                        cGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCgag                                     >  7:353850/1‑139 (MQ=255)                                                                                         ggaatttCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCgaga                                    <  2:54844/134‑1 (MQ=255)                                                                                          tCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCgagag                                   <  3:186039/139‑1 (MQ=255)                                                                                          tCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCgagag                                   <  5:406157/139‑1 (MQ=255)                                                                                              ttCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGATTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCgtg                               >  5:254381/1‑139 (MQ=255)                                                                                                 tGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACTTCGCCCCAGTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTg                            <  7:378193/139‑1 (MQ=255)                                                                                                   tttCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTg                                                                                      >  7:106473/1‑79 (MQ=255)                                                                                                   tttCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTg                                                                                      <  8:106473/79‑1 (MQ=255)                                                                                                   tttCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTg                            <  4:434345/137‑1 (MQ=255)                                                                                                        tttGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                              >  7:213216/1‑82 (MQ=255)                                                                                                        tttGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                              <  8:213216/82‑1 (MQ=255)                                                                                                        tttGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTGTTCAGCCTTCGAGAGCGTGTTGAGGCCtt                     >  3:55546/1‑139 (MQ=255)                                                                                                                   aTCCTGTAGAGCACTACTCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGGTGAGGCCTTTTTCTGTTTCa          <  3:279535/139‑1 (MQ=255)                                                                                                                       tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                              <  7:413625/67‑1 (MQ=255)                                                                                                                       tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                              <  3:216334/67‑1 (MQ=255)                                                                                                                       tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                              >  8:413625/1‑67 (MQ=255)                                                                                                                       tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                              >  4:216334/1‑67 (MQ=255)                                                                                                                       tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTg      >  1:67285/1‑139 (MQ=255)                                                                                                                       tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTg      >  1:62833/1‑139 (MQ=255)                                                                                                                       tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTg      <  3:220330/139‑1 (MQ=255)                                                                                                                       tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTg      >  4:220330/1‑139 (MQ=255)                                                                                                                        gTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGc     >  7:376345/1‑139 (MQ=255)                                                                                                                            aTCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTc  >  8:415598/1‑138 (MQ=255)                                                                                                                                  |                                                                                                                                    TGATGGATCTGTATCCGGAATGGTTTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAAAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAAATCACTGATTAGTGAAATCGCTTTTTCTACATTGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTGTCTTCATCATAGAGCTGATTTTCAGCTTTCGAGAGAGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTC  >  CP006881/2185169‑2185429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑