Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,185,310 C→G A52A (GCG→GCC)  U712_10945 ← TPR repeat‑containing protein ypiA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,185,3100CG100.0% 334.4 / NA 102A52A (GCG→GCC) U712_10945TPR repeat‑containing protein ypiA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (49/53);  total (49/53)

Only 100 of 102 total aligned reads displayed.

GATCTGTATCCGGAATGGTTTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAAAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAAATCACTGATTAGTGAAATCGCTTTTTCTACATTGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTGTCTTCATCATAGAGCTGATTTTCAGCTTTCGAGAGAGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGG  >  CP006881/2185174‑2185443
                                                                                                                                        |                                                                                                                                     
gATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGc                                                                                                                                     <  6:446153/139‑1 (MQ=255)
gATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGc                                                                                                                                     <  4:434456/139‑1 (MQ=255)
gATCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGc                                                                                                                                     <  6:439850/139‑1 (MQ=255)
 aTCTGTTTCCGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCt                                                                                                                                    >  1:54844/1‑139 (MQ=255)
          cGGAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACa                                                                                                                           <  4:211510/139‑1 (MQ=255)
           ggAATTGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACAt                                                                                                                          <  6:422229/139‑1 (MQ=255)
           ggAATAGTCTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACAt                                                                                                                          <  8:175814/139‑1 (MQ=255)
                agtctCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGccc                                                                                                                     >  4:139910/5‑139 (MQ=255)
                 gtctCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGccc                                                                                                                     <  4:10404/135‑1 (MQ=255)
                      cAGGACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCTGTTCTGTTTGATTTGGTTATTAATCATGTAGATCACTAATCACTGAAATGGCTTTATCTACATCGCCCCCCt                                                                                                                 <  1:437522/137‑1 (MQ=255)
                      cAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                                                                                 <  6:322112/137‑1 (MQ=255)
                      cAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                                                                                 <  7:69280/137‑1 (MQ=255)
                      cAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                                                                                 <  3:382741/137‑1 (MQ=255)
                           caGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGATATGGCTTTTTCTACATCGCCCCACTCGtaat                                                                                                           >  1:373559/1‑138 (MQ=255)
                            aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGTATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGtaata                                                                                                          >  8:332189/1‑138 (MQ=255)
                            aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACa                                                                                                                           <  3:357343/121‑1 (MQ=255)
                            aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                                                                                 <  5:245209/131‑1 (MQ=255)
                            aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                                                                                 >  6:245209/1‑131 (MQ=255)
                            aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGtaata                                                                                                          >  7:168063/1‑138 (MQ=255)
                            aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATAACTAATCAGTGAAATGGCTTTTTCTACa                                                                                                                           >  4:357343/1‑121 (MQ=255)
                            aGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTAATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGtaata                                                                                                          >  7:158866/1‑138 (MQ=255)
                              cGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGcc                                                                                                                      <  6:220150/124‑1 (MQ=255)
                              cGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAg                                                                                                       >  3:150258/1‑139 (MQ=255)
                              cGAGGGCTTGTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAg                                                                                                       >  7:243480/1‑139 (MQ=255)
                                aGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCt                                                                                                     >  6:380148/1‑139 (MQ=255)
                                aGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTGTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTGTTCTACCTCGCCCCACTCGTAATAAAGCt                                                                                                     >  4:279535/1‑139 (MQ=255)
                                   gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGGGTAGTAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCTCTCGTAATAAAGCTggg                                                                                                  <  5:71859/139‑1 (MQ=255)
                                   gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                                                                                  <  7:232366/139‑1 (MQ=255)
                                   gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                                                                                  >  6:406157/1‑139 (MQ=255)
                                   gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                                                                                  >  4:186039/1‑139 (MQ=255)
                                   gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                                                                                  <  6:211733/139‑1 (MQ=255)
                                   gCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                                                                                  <  3:179743/139‑1 (MQ=255)
                                   gCTTTTTCTTCTTCGTCAATATCTATTAAAAGGTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTggg                                                                                                  <  8:445210/139‑1 (MQ=255)
                                         tcttcttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCa                                                                                             <  2:410547/138‑1 (MQ=255)
                                         tcttcttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCa                                                                                             <  3:300003/138‑1 (MQ=255)
                                         tcttcttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCa                                                                                             <  1:386249/138‑1 (MQ=255)
                                         tcttcttcGTCAATATCTAATAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCa                                                                                             <  2:443518/138‑1 (MQ=255)
                                          cttcttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                                            <  3:372482/138‑1 (MQ=255)
                                             cttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                                                                                 <  1:69785/114‑1 (MQ=255)
                                             cttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACt                                                                                                                 >  2:69785/1‑114 (MQ=255)
                                             cttcGTCAATATCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGc                                                                                        >  2:428535/1‑139 (MQ=255)
                                                agTCAATATCTATTAAAAGTTCATCGTAGAAATTCTTCAGTTATGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATAGCCACACTCGTAATAAAGCTGGGCTGAAATGGc                                                                                        <  4:101338/135‑1 (MQ=255)
                                                        tCTATTAAAAGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTtca                                                                              <  5:380148/138‑1 (MQ=255)
                                                               aaaGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTcatcatgcag                                                                      <  3:394321/139‑5 (MQ=255)
                                                                 aGTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCt                                                                    <  4:150258/139‑1 (MQ=255)
                                                                  gTTCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTg                                                                   >  7:314170/1‑139 (MQ=255)
                                                                    tCAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTgtt                                                                 >  8:46101/1‑137 (MQ=255)
                                                                     cAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGttt                                                                >  2:51770/1‑139 (MQ=255)
                                                                      aGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGtttt                                                               >  1:80328/1‑139 (MQ=255)
                                                                       gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt                                                              <  7:57451/139‑1 (MQ=255)
                                                                       gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt                                                              <  8:168063/139‑1 (MQ=255)
                                                                       gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt                                                              <  8:243480/139‑1 (MQ=255)
                                                                       gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt                                                              <  5:413042/139‑1 (MQ=255)
                                                                       gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGACCCACTCTTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt                                                              <  1:364426/139‑1 (MQ=255)
                                                                         gTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa                                                            <  7:46101/139‑1 (MQ=255)
                                                                                  cGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCgag                                                   >  7:353850/1‑139 (MQ=255)
                                                                                   ggaatttCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCgaga                                                  <  2:54844/134‑1 (MQ=255)
                                                                                    tCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCgagag                                                 <  5:406157/139‑1 (MQ=255)
                                                                                    tCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCgagag                                                 <  3:186039/139‑1 (MQ=255)
                                                                                        ttCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGATTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCgtg                                             >  5:254381/1‑139 (MQ=255)
                                                                                           tGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACTTCGCCCCAGTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTg                                          <  7:378193/139‑1 (MQ=255)
                                                                                             tttCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTg                                                                                                    <  8:106473/79‑1 (MQ=255)
                                                                                             tttCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTg                                                                                                    >  7:106473/1‑79 (MQ=255)
                                                                                             tttCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTg                                          <  4:434345/137‑1 (MQ=255)
                                                                                                  tttGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                                            >  7:213216/1‑82 (MQ=255)
                                                                                                  tttGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                                            <  8:213216/82‑1 (MQ=255)
                                                                                                  tttGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTGTTCAGCCTTCGAGAGCGTGTTGAGGCCtt                                   >  3:55546/1‑139 (MQ=255)
                                                                                                             aTCCTGTAGAGCACTACTCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGGTGAGGCCTTTTTCTGTTTCa                        <  3:279535/139‑1 (MQ=255)
                                                                                                                 tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                                            >  4:216334/1‑67 (MQ=255)
                                                                                                                 tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                                            <  7:413625/67‑1 (MQ=255)
                                                                                                                 tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                                            <  3:216334/67‑1 (MQ=255)
                                                                                                                 tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                                            >  8:413625/1‑67 (MQ=255)
                                                                                                                 tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTg                    >  1:67285/1‑139 (MQ=255)
                                                                                                                 tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTg                    >  4:220330/1‑139 (MQ=255)
                                                                                                                 tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTg                    >  1:62833/1‑139 (MQ=255)
                                                                                                                 tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTg                    <  3:220330/139‑1 (MQ=255)
                                                                                                                  gTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGc                   >  7:376345/1‑139 (MQ=255)
                                                                                                                      aTCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTc                >  8:415598/1‑138 (MQ=255)
                                                                                                                          ctaatcaGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACGTGCTTCAACt            >  1:424431/7‑138 (MQ=255)
                                                                                                                           taatcaGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAAc             <  5:234688/131‑1 (MQ=255)
                                                                                                                           taatcaGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAAc             >  6:234688/6‑136 (MQ=255)
                                                                                                                           taatcaGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTATTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTaa          >  7:351041/6‑139 (MQ=255)
                                                                                                                             atcaGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAAtt        >  5:283670/4‑139 (MQ=255)
                                                                                                                               caGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAAttt       >  3:182214/2‑138 (MQ=255)
                                                                                                                                aGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTa     >  6:288715/1‑139 (MQ=255)
                                                                                                                                  tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                                            <  6:64441/50‑1 (MQ=255)
                                                                                                                                  tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCaa                                                                                            >  5:64441/1‑50 (MQ=255)
                                                                                                                                  tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCTATGGCTTTATCTTCATCATGCAGCTGTTTTTCCGCCTTCGAGAGCGTGTTGAGGAGTTTTTCTGTTTCACCTGCTACAACTAATTTTATg   >  5:205525/1‑139 (MQ=255)
                                                                                                                                  tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCt                                                                                 <  2:51297/61‑1 (MQ=255)
                                                                                                                                  tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCt                                                                                 >  1:51297/1‑61 (MQ=255)
                                                                                                                                  tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa                                                            >  5:25945/1‑82 (MQ=255)
                                                                                                                                  tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa                                                            >  3:87976/1‑82 (MQ=255)
                                                                                                                                  tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa                                                            <  6:25945/82‑1 (MQ=255)
                                                                                                                                  tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa                                                            <  4:87976/82‑1 (MQ=255)
                                                                                                                                  tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa                                                            >  5:19923/1‑82 (MQ=255)
                                                                                                                                  tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa                                                            <  6:19923/82‑1 (MQ=255)
                                                                                                                                  tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATg   >  1:391744/1‑139 (MQ=255)
                                                                                                                                  tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACATGCTTCAACTAATTTTATg   >  2:201872/1‑139 (MQ=255)
                                                                                                                                  tGAAATGGCTTTTTCTACATCGACCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATg   >  1:233094/1‑139 (MQ=255)
                                                                                                                                    aaaTGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATgg  <  6:283670/138‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                     
GATCTGTATCCGGAATGGTTTCCAGCACAGCGAGGGCTTTTTCTTCTTCGTCAATATCTATTAAAAGTTCAGCGTAAAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAAATCACTGATTAGTGAAATCGCTTTTTCTACATTGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTGTCTTCATCATAGAGCTGATTTTCAGCTTTCGAGAGAGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGG  >  CP006881/2185174‑2185443

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑