Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,185,379	A→T	N29K (AAT→AAA)	U712_10945 ←	TPR repeat‑containing protein ypiA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,185,379	0	A	T	100.0%	282.3 / NA	91	N29K (AAT→AAA)	U712_10945	TPR repeat‑containing protein ypiA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (48/43);  total (48/43)

CAGCGTAAAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAAATCACTGATTAGTGAAATCGCTTTTTCTACATTGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTGTCTTCATCATAGAGCTGATTTTCAGCTTTCGAGAGAGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTTTCTTTTCCTATAGAACATCAACCATACAAAAAA  >  CP006881/2185243‑2185513                                                                                                                                         |                                                                                                                                       cAGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGttt                                                                                                                                      >  2:51770/1‑139 (MQ=255)  aGCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGtttt                                                                                                                                     >  1:80328/1‑139 (MQ=255)   gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt                                                                                                                                    <  5:413042/139‑1 (MQ=255)   gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt                                                                                                                                    <  8:243480/139‑1 (MQ=255)   gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt                                                                                                                                    <  8:168063/139‑1 (MQ=255)   gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt                                                                                                                                    <  7:57451/139‑1 (MQ=255)   gCGTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGACCCACTCTTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTtttt                                                                                                                                    <  1:364426/139‑1 (MQ=255)     gTAGAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa                                                                                                                                  <  7:46101/139‑1 (MQ=255)              cGTCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCgag                                                                                                                         >  7:353850/1‑139 (MQ=255)               ggaatttCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCgaga                                                                                                                        <  2:54844/134‑1 (MQ=255)                tCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCgagag                                                                                                                       <  3:186039/139‑1 (MQ=255)                tCAGTTCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCgagag                                                                                                                       <  5:406157/139‑1 (MQ=255)                    ttCTGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGATTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCgtg                                                                                                                   >  5:254381/1‑139 (MQ=255)                       tGTTTCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACTTCGCCCCAGTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTg                                                                                                                <  7:378193/139‑1 (MQ=255)                         tttCATTTGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTg                                                                                                                <  4:434345/137‑1 (MQ=255)                              tttGGATATAAATCATGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTGTTCAGCCTTCGAGAGCGTGTTGAGGCCtt                                                                                                         >  3:55546/1‑139 (MQ=255)                                         aTCCTGTAGAGCACTACTCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGGTGAGGCCTTTTTCTGTTTCa                                                                                              <  3:279535/139‑1 (MQ=255)                                             tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTg                                                                                          <  3:220330/139‑1 (MQ=255)                                             tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTg                                                                                          >  1:67285/1‑139 (MQ=255)                                             tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTg                                                                                          >  1:62833/1‑139 (MQ=255)                                             tGTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTg                                                                                          >  4:220330/1‑139 (MQ=255)                                              gTAGATCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGc                                                                                         >  7:376345/1‑139 (MQ=255)                                                  aTCACTAATCAGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTc                                                                                      >  8:415598/1‑138 (MQ=255)                                                      ctaatcaGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACGTGCTTCAACt                                                                                  >  1:424431/7‑138 (MQ=255)                                                       taatcaGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAAc                                                                                   <  5:234688/131‑1 (MQ=255)                                                       taatcaGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAAc                                                                                   >  6:234688/6‑136 (MQ=255)                                                       taatcaGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTATTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTaa                                                                                >  7:351041/6‑139 (MQ=255)                                                         atcaGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAAtt                                                                              >  5:283670/4‑139 (MQ=255)                                                           caGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAAttt                                                                             >  3:182214/2‑138 (MQ=255)                                                            aGTGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTa                                                                           >  6:288715/1‑139 (MQ=255)                                                              tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCTATGGCTTTATCTTCATCATGCAGCTGTTTTTCCGCCTTCGAGAGCGTGTTGAGGAGTTTTTCTGTTTCACCTGCTACAACTAATTTTATg                                                                         >  5:205525/1‑139 (MQ=255)                                                              tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa                                                                                                                                  <  6:25945/82‑1 (MQ=255)                                                              tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa                                                                                                                                  >  5:19923/1‑82 (MQ=255)                                                              tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa                                                                                                                                  >  5:25945/1‑82 (MQ=255)                                                              tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa                                                                                                                                  <  4:87976/82‑1 (MQ=255)                                                              tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa                                                                                                                                  <  6:19923/82‑1 (MQ=255)                                                              tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCa                                                                                                                                  >  3:87976/1‑82 (MQ=255)                                                              tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATg                                                                         >  1:391744/1‑139 (MQ=255)                                                              tGAAATGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACATGCTTCAACTAATTTTATg                                                                         >  2:201872/1‑139 (MQ=255)                                                              tGAAATGGCTTTTTCTACATCGACCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATg                                                                         >  1:233094/1‑139 (MQ=255)                                                                aaaTGGCTTTTTCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATgg                                                                        <  6:283670/138‑1 (MQ=255)                                                                        ttttCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCgaga                                                                                                                        <  2:66944/82‑1 (MQ=255)                                                                        ttttCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCgaga                                                                                                                        >  1:66944/1‑82 (MQ=255)                                                                        ttttCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGaa                                                               >  4:104405/1‑139 (MQ=255)                                                                        ttttCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGaa                                                               >  4:180491/1‑139 (MQ=255)                                                                          ttCTACATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAAt                                                              <  2:80328/138‑1 (MQ=255)                                                                             tACATCGCACCACTCGTAATAAAGCTTGTCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCTAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAAt                                                          <  3:345673/139‑1 (MQ=255)                                                                               cctcgCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAAt                                                          <  2:373559/133‑1 (MQ=255)                                                                               cATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATg                                                         >  5:230876/1‑138 (MQ=255)                                                                               cATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCATTTTTCTGTTTCACCTGCTTCAAGTAATTTTATTGATTCTTGAATCAATGt                                                        >  4:345673/1‑139 (MQ=255)                                                                               cATCGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTCTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAAt                                                          <  4:55546/137‑1 (MQ=255)                                                                                   gCCACACTCGTAATTAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTAtt                                                     <  7:332189/138‑1 (MQ=255)                                                                                            gTAATAAAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCATTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGa                                            <  6:254381/138‑1 (MQ=255)                                                                                              aataaAGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCg                                         >  6:404054/1‑139 (MQ=255)                                                                                                 aaaGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTc                                      >  8:445635/1‑139 (MQ=255)                                                                                                   aGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATg                                                                         >  1:203476/1‑102 (MQ=255)                                                                                                   aGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATg                                                                         <  2:203476/102‑1 (MQ=255)                                                                                                   aGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTAtt                                                     <  4:237903/122‑1 (MQ=255)                                                                                                   aGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTAtt                                                     >  3:237903/1‑122 (MQ=255)                                                                                                   aGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCTAATCGGACCGGTCct                                    >  1:157621/1‑139 (MQ=255)                                                                                                   aGCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCct                                    >  6:202564/1‑139 (MQ=255)                                                                                                    gCTGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCTCCTAATTTTATGGCTGCTTGAATCAATGTATTCAAATCGGACCGGGccgt                                   >  1:443483/1‑137 (MQ=255)                                                                                                      tGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAAt                                                >  4:406434/1‑124 (MQ=255)                                                                                                      tGGGCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAAt                                                <  3:406434/124‑1 (MQ=255)                                                                                                       gggCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCctttct                                >  1:9433/1‑139 (MQ=255)                                                                                                        ggCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCt                                                                                        >  8:237685/1‑82 (MQ=255)                                                                                                        ggCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCt                                                                                        <  7:237685/82‑1 (MQ=255)                                                                                                        ggCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGAc                                           <  1:204000/127‑1 (MQ=255)                                                                                                        ggCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGAc                                           >  2:204000/1‑127 (MQ=255)                                                                                                        ggCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCctttctt                               >  8:53351/1‑139 (MQ=255)                                                                                                        ggCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCctttctt                               >  4:422668/1‑139 (MQ=255)                                                                                                        ggCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCctttctt                               >  3:370077/1‑139 (MQ=255)                                                                                                        ggCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCctttctt                               >  6:250384/1‑139 (MQ=255)                                                                                                        ggCTGCAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCctttc                                 <  2:126281/137‑1 (MQ=255)                                                                                                             cAATGGCTTTATCTTCCTCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTTTCTTTTc                            <  1:428535/137‑1 (MQ=255)                                                                                                             cAATGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTTTCTTTTc                            <  7:415598/137‑1 (MQ=255)                                                                                                                tGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTTTCTTTTCCtata                       <  3:139910/139‑1 (MQ=255)                                                                                                                tGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTTTCTTTTCCtata                       <  8:376345/139‑1 (MQ=255)                                                                                                                tGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTTTCTTTTCCtata                       <  2:424378/139‑1 (MQ=255)                                                                                                                tGGCTTTATCTTCATCATGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTTTCTTTTCCtata                       <  2:391744/139‑1 (MQ=255)                                                                                                                            catcatGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTTTCTTTTCCTATACAACATCAAcc            >  6:333859/1‑138 (MQ=255)                                                                                                                            catcatGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTTTCTTTTCCTATACAACATCAAcc            <  5:404054/138‑1 (MQ=255)                                                                                                                            catcatGCAGCAGTTTTTCAGCCTTAGAGATCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGAACCGGACCTTTATTTTCATATACAACATAAAca            >  7:21701/1‑137 (MQ=255)                                                                                                                             atcatGCAGCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTTTCTTTTCCTATACAACATCAACCa           >  4:126338/1‑138 (MQ=255)                                                                                                                                  gcagCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCTGCCCGGTCCTTTCTTTTCCTATACAACATCAACCATACaa      >  3:422368/3‑138 (MQ=255)                                                                                                                                  gcagCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTTTCTTTTCCTATACAACATCAACCATACaa      >  7:419203/3‑138 (MQ=255)                                                                                                                                   cagCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTGTCTTTTCCTATACAACATCAACCATACaaaa    <  3:126338/138‑1 (MQ=255)                                                                                                                                   cagCTGTTTTTCAGCCTTCGAGAGCGTGTGGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTTTCTTTTCCTATACAACATCAACCATACaaa     <  8:351041/137‑1 (MQ=255)                                                                                                                                    agCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCctttc                                 >  4:20143/1‑109 (MQ=255)                                                                                                                                    agCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCctttc                                 <  3:20143/109‑1 (MQ=255)                                                                                                                                    agCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGGCCTTTCTTTTCCTATACAACATCAACCATACaaaaa   <  5:202564/139‑1 (MQ=255)                                                                                                                                     gCTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTTTCTTTTCCTATACAACATCAACCATACaaaaaa  <  2:233094/139‑1 (MQ=255)                                                                                                                                      cTGTTTTTCAGCCTTCGAGAGCGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTTTCTTTTCCTATACAACATCAACCATACaaaaa   >  7:25456/1‑137 (MQ=255)                                                                                                                                         |                                                                                                                                       CAGCGTAAAAATTCGTCAGTTCTGTTTCATTTGGATATAAATCATGTAAATCACTGATTAGTGAAATCGCTTTTTCTACATTGCCCCACTCGTAATAAAGCTGGGCTGCAATGGCTTTGTCTTCATCATAGAGCTGATTTTCAGCTTTCGAGAGAGTGTTGAGGCCTTTTTCTGTTTCACCTGCTTCAACTAATTTTATGGCTTCTTGAATCAATGTATTCAAATCGGACCGGTCCTTTCTTTTCCTATAGAACATCAACCATACAAAAAA  >  CP006881/2185243‑2185513

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑