BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,186,230	C→T	V291I (GTC→ATT)	U712_10955 ←	3‑phosphoshikimate 1‑carboxyvinyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,186,230	0	C	T	100.0%	312.6 / NA	99	V291I (GTC→ATT)	U712_10955	3‑phosphoshikimate 1‑carboxyvinyltransferase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (35/64); total (35/64)

GCTCTGCCGCGTCCTTAATAACGGTGGTTCCTTCCGCCTGGGTCGCAAGAAGCGCAATGATAGGTATTTCATCAATTAAACGCGGAATGATATCTCCACCAATTTCAACCGCTTTTAGAGATGACGTTTCTATGACCAAATCACCGTAAGGCTCTGCACTGCTGTCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATGATACCTGTCCGAGTCGGATTTAAACCTACGTTTTTTAATACAATCTTA  >  CP006881/2186095‑2186360

gcgctGCCGCGTCCTTAATAACGGTTGTTCCTTCCTCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATTATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCaa                                                                                                                                 <  4:102802/136‑1 (MQ=255)

gCTCTGCCGCGTCCTTAATAACGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCaa                                                                                                                                 <  6:25307/139‑1 (MQ=255)

    tGCCGCGTCCTTAATAACGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAAt                                                                                                                               <  3:131460/137‑1 (MQ=255)

    tGCCGCGTCCTTAATAACGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAAt                                                                                                                               <  8:239103/137‑1 (MQ=255)

    tGCCGCGTCCTTAATAACGGTGGTTCCTTCAGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAAt                                                                                                                               <  3:38438/137‑1 (MQ=255)

    tGCCGCGTCCTTAATAACGGTGGTGCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAAt                                                                                                                               <  8:99958/137‑1 (MQ=255)

    tGCCGCCTCCTTAATAACGGTGGTTCCTTCCGCCTGAGGCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCGTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAAt                                                                                                                               <  1:411808/137‑1 (MQ=255)

     gCCGCGTCCTTAATAACGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAAt                                                                                                                               <  4:195507/136‑1 (MQ=255)

     gCCGCGTCCTTAATAACGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAAt                                                                                                                               >  3:195507/1‑136 (MQ=255)

      ccGCGTCCTTAATAACGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATct                                                                                                                             <  8:110785/137‑2 (MQ=255)

         cgTCCTTAATAACGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTccat                                                                                                                         >  2:80363/1‑136 (MQ=255)

         cgTCCTTAATAACGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATa                                                                                                                        <  8:432315/139‑1 (MQ=255)

         cgTCCTTAATAACGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATa                                                                                                                        <  6:132644/139‑1 (MQ=255)

         cgTCCTTAATAACGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATa                                                                                                                        <  7:375752/139‑1 (MQ=255)

         cgTCCTTAATAACGGTGGTGCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATa                                                                                                                        <  8:91860/139‑1 (MQ=255)

          gTCCTTAATAACGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATaa                                                                                                                       <  3:144052/139‑1 (MQ=255)

           tCCTTAATAACGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAg                                                                                                                      >  4:281100/1‑139 (MQ=255)

           tCCTTAATAACGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAg                                                                                                                      >  8:116259/1‑139 (MQ=255)

           tCCTTAATAACGGTGGTTCCTTACGCCTGAGTCGCAAGAAGCGCCAAGATAGGCAACACAACAATTAAACCCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGAAGACGTTTCAATAATCAAATCACCATAAg                                                                                                                      >  4:277329/1‑139 (MQ=255)

             cTTAATAACGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAgg                                                                                                                     <  3:409039/138‑1 (MQ=255)

                aataaCGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGct                                                                                                                   <  8:57827/137‑1 (MQ=255)

                    aCGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTTAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCa                                                                                                              <  2:99920/138‑1 (MQ=255)

                    aCGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCa                                                                                                              <  5:419589/138‑1 (MQ=255)

                    aCGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCa                                                                                                              <  3:375009/138‑1 (MQ=255)

                    aCGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCa                                                                                                              <  3:277329/138‑1 (MQ=255)

                    aCGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCa                                                                                                              <  7:49750/138‑1 (MQ=255)

                     cGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATa                                                                                                                        <  4:341653/127‑1 (MQ=255)

                     cGGTGGTTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATa                                                                                                                        >  3:341653/1‑127 (MQ=255)

                       gtggtTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCAccgc                                                                                                          >  6:137222/1‑139 (MQ=255)

                        tggtTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCAccgct                                                                                                         <  7:116259/139‑1 (MQ=255)

                        tggtTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCAccgct                                                                                                         <  3:407960/139‑1 (MQ=255)

                          gtTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCAccgctat                                                                                                       >  7:74636/1‑137 (MQ=255)

                          gtTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCAccgctat                                                                                                       >  7:247706/1‑137 (MQ=255)

                          gtTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCAccgctat                                                                                                       >  4:7244/1‑137 (MQ=255)

                          gtTCCTTCCGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCAccgctat                                                                                                       >  3:63361/1‑137 (MQ=255)

                                tccGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCa                                                                                                              <  2:8066/126‑1 (MQ=255)

                                tccGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCa                                                                                                              >  1:8066/1‑126 (MQ=255)

                                tccGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATcag                                                                                                    >  6:48266/1‑136 (MQ=255)

                                 ccGCCTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATcagca                                                                                                  <  3:206543/137‑1 (MQ=255)

                                    ccTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATa                                                                                                                        >  5:354100/1‑112 (MQ=255)

                                    ccTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATa                                                                                                                        <  6:354100/112‑1 (MQ=255)

                                     cTGAGTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGt                                                                                            <  5:438726/139‑1 (MQ=255)

                                        agTCGCAAGAAGCGCGATGATAGGGATCTCTTCAATTAAACGCGGTATGATATCTGCTCCGATTTCATCTGCCTTTAGAGATGACGTTTCTATATTCTTTTCTCCATAAGGGTCTGCTCCGCTATCAGCAGATGGTTTg                                                                                         >  5:359438/2‑139 (MQ=255)

                                        agTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAAt                                                                                                                               <  7:238010/100‑1 (MQ=255)

                                        agTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAAt                                                                                                                               >  8:238010/2‑101 (MQ=255)

                                        agTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGttt                                                                                          >  1:199016/2‑138 (MQ=255)

                                        agTCGCAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTGAGAGAACACGTTTCTATAATCAAATCTCCATATGGCTCTGCACCGCTATCAGCAGATGGatt                                                                                          >  5:365445/2‑138 (MQ=255)

                                        agTCGCAAGAAGCGCGAGGATAGGGCTCTCATCAATTAAACGCGGAATCATATCTCCTCCGATTTCAACTGCCTTTAGAGATCACGTTTCTATAATCAAATCTCCATAATGCTCTGCACCGCTATCACAAGATGGttt                                                                                          >  2:366445/2‑138 (MQ=255)

                                             cAAGAAGCGCGATGATAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTc                                                                                    <  7:57636/139‑1 (MQ=255)

                                                           aTAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGccccc                                                                       <  7:405517/138‑1 (MQ=255)

                                                           aTAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCGCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCa                                                                      <  2:289312/139‑1 (MQ=255)

                                                            tAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCAccgctat                                                                                                       <  3:366628/105‑3 (MQ=255)

                                                            tAGGGATCTCATCAATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCAccgctat                                                                                                       >  4:366628/1‑103 (MQ=255)

                                                                   ctcatcaATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTg                                                               >  3:132650/2‑138 (MQ=255)

                                                                   ctcatcaATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTGTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTg                                                               >  8:257366/2‑138 (MQ=255)

                                                                     catcaATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATcagca                                                                                                  <  7:128292/101‑1 (MQ=255)

                                                                     catcaATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATcagca                                                                                                  >  8:128292/1‑101 (MQ=255)

                                                                     catcaATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAg                                                            >  1:2527/1‑139 (MQ=255)

                                                                        caATTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGAc                                                         <  1:288657/139‑1 (MQ=255)

                                                                         aaTTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGAc                                                         <  4:41364/138‑1 (MQ=255)

                                                                         aaTTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGAc                                                         <  3:7244/138‑1 (MQ=255)

                                                                         aaTTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGAc                                                         <  5:137222/138‑1 (MQ=255)

                                                                         aaTTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGAc                                                         <  4:20333/138‑1 (MQ=255)

                                                                         aaTTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGAc                                                         <  2:2527/138‑1 (MQ=255)

                                                                         aaTTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACa                                                        <  3:91410/139‑1 (MQ=255)

                                                                         aaTTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACa                                                        <  2:199016/139‑1 (MQ=255)

                                                                         aaTTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTAAAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGAc                                                         <  8:427272/138‑1 (MQ=255)

                                                                          aTTAAACGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACAt                                                       >  4:351206/1‑139 (MQ=255)

                                                                              aaCGCGGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAAt                                                   <  4:63361/139‑1 (MQ=255)

                                                                                cgcgGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTg                                                                            >  3:11333/1‑112 (MQ=255)

                                                                                cgcgGAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTg                                                                            <  4:11333/112‑1 (MQ=255)

                                                                                   ggAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGAc                                                         <  1:183402/128‑1 (MQ=255)

                                                                                   ggAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGAc                                                         >  2:183402/1‑128 (MQ=255)

                                                                                   ggAATGATATCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATAc                                              <  4:132650/139‑1 (MQ=255)

                                                                                         atatCTCCTCCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTcc                                        <  1:80363/139‑1 (MQ=255)

                                                                                             ctcctcCGATTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGt                                    >  8:234980/1‑139 (MQ=255)

                                                                                               cctccgaTTTCATCTGCCTTTAGAGATGACGTTACTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGAAGCTTTGATTTCACGTTTTGCCCCCATGTTTTGAGGGCCCTCAATATTACCTGTCCTAGTCg                                  >  8:104782/7‑139 (MQ=255)

                                                                                               cctccgaTTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGTCg                                  >  1:18040/7‑139 (MQ=255)

                                                                                                ctgcgaTTTCTACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACAGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGt                                    <  1:366445/131‑1 (MQ=255)

                                                                                                ctccgaTTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGt                                    <  3:281100/131‑1 (MQ=255)

                                                                                                     aTTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCa                                                                                                              <  3:260694/57‑1 (MQ=255)

                                                                                                     aTTTCAACTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCa                                                                                                              >  4:260694/1‑57 (MQ=255)

                                                                                                          aaCTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGAc                                                         >  5:300602/1‑105 (MQ=255)

                                                                                                          aaCTGCCTTTAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGAc                                                         <  6:300602/105‑1 (MQ=255)

                                                                                                                   tAGAGATGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGTCGGATTTAAACCTACGttttt               <  2:385549/138‑1 (MQ=255)

                                                                                                                     gagaTGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGTCGGATTTAAACCTACGTTTTTCaa            <  8:247706/139‑1 (MQ=255)

                                                                                                                     gagaTGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGGTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGTCGGATTTAAACCTACGTTTTTCaa            <  8:74636/139‑1 (MQ=255)

                                                                                                                       gaTGACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTG‑CCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGTCGGATTTATACCTACGTTTTTCAATa          <  3:169360/138‑1 (MQ=255)

                                                                                                                          gACGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGTCGGATTTAAACCTACGTTTTTCAATACaa       >  5:184697/1‑139 (MQ=255)

                                                                                                                           aCGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCaa                                                    >  7:380352/1‑93 (MQ=255)

                                                                                                                           aCGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCaa                                                    <  8:380352/93‑1 (MQ=255)

                                                                                                                           aCGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCATTAATACCTGTCCGAGTCGGATTTAAACCTACGTTTTTCAATACAAt      >  8:332967/1‑139 (MQ=255)

                                                                                                                           aCGTTTCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGTCGGATTTAAACCTACGTTTTTCAATACaa       <  6:365445/138‑1 (MQ=255)

                                                                                                                           aCGTTTCAATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTATGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGTCGGATTTAAACCTACGTTTTTCAATACaa       <  6:359438/138‑1 (MQ=255)

                                                                                                                                tCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGTCGGATTTAAACCTACGTTTTTCAATACAAttctg  <  2:43648/138‑5 (MQ=255)

                                                                                                                                tCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGTCGGATTTAAACCTACGTTTTTCAATACAAttctg  <  7:257366/138‑5 (MQ=255)

                                                                                                                                tCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGTCGGATTTAAACCTACGTTTTTCAATACAAttctg  <  5:48266/138‑5 (MQ=255)

                                                                                                                                tCTATAATCAAATCTCCATAAGGCTCTGCACCGCTATCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGTCGGATTTAAACCTACGTTTTTCAATACAAttctg  <  6:299554/138‑5 (MQ=255)

                                                                                                                                tCTATAATCAAATCTCCATAAGGCTCTGCACCGCTAGCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATAATACCTGTCCGAGTCGGATTTAAACCTACGTTTTTCAATACAAttctg  <  7:67996/138‑5 (MQ=255)

GCTCTGCCGCGTCCTTAATAACGGTGGTTCCTTCCGCCTGGGTCGCAAGAAGCGCAATGATAGGTATTTCATCAATTAAACGCGGAATGATATCTCCACCAATTTCAACCGCTTTTAGAGATGACGTTTCTATGACCAAATCACCGTAAGGCTCTGCACTGCTGTCAGCAGATGGTTTGATTTCAAGTTTTGCCCCCATGTTTTGAAGGACATCAATGATACCTGTCCGAGTCGGATTTAAACCTACGTTTTTTAATACAATCTTA  >  CP006881/2186095‑2186360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`