Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,186,921	T→G	Q60H (CAA→CAC)	U712_10955 ←	3‑phosphoshikimate 1‑carboxyvinyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,186,921	0	T	G	100.0%	242.4 / NA	76	Q60H (CAA→CAC)	U712_10955	3‑phosphoshikimate 1‑carboxyvinyltransferase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (45/31);  total (45/31)

AGGACGGCCCGCCAAAATGCCGAGCATGAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCACTCAGGGAATCGATTCCATTTCCGTGAATCACTACATTGCTGCCGTTTTGCTCAATTTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCCGCTCCCGGCAGAAAGTTTTTCACAGTTGTTGTGCCCTTCGCTAGCGCGCCAAACATGACGGAACGGTGAGAAATGGATTTATCACCAG  >  CP006881/2186786‑2187054                                                                                                                                        |                                                                                                                                      aGGACGGCCCGCCAATATTCCGAGCATCAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAAtgtg                                                                                                                                     >  6:336619/1‑138 (MQ=255)  ggACGGCCCGCGAATAGTCCGAGCAGCAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGGATCGATTCCTTTTCCGGTAATCACGACATCGCTGCTGCGTTGCTCAATGTGaa                                                                                                                                   <  4:52958/139‑1 (MQ=255)      ggCCCGCCAATATTCCGAGCATCAGGCGAATCGTTGTACCTGAATTTCCGCCATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACAcc                                                                                                                               >  6:153261/1‑139 (MQ=255)      ggCCCGCCAATATTCCGAGCATCAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCTATGTGAACAcc                                                                                                                               >  8:445822/1‑139 (MQ=255)      ggCCCGCCAATATTCCGAGCATCAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACAcc                                                                                                                               >  7:305091/1‑139 (MQ=255)      ggCCCGCCAATATTCCGAGCATCAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACAcc                                                                                                                               >  7:259418/1‑139 (MQ=255)      ggCCCGCCAATATTCCGAGCATCAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACAcc                                                                                                                               >  7:182493/1‑139 (MQ=255)      ggCCCGCCAATATTCCGAGCATCAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACAcc                                                                                                                               >  1:122822/1‑139 (MQ=255)      ggCCCGCCAATATTCCGAGCATCAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACAcc                                                                                                                               >  2:5478/1‑139 (MQ=255)      ggCCCGCCAATATTCCGAGCATCAGGCGAATAGTTGTACATGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGGACAcc                                                                                                                               >  5:173554/1‑139 (MQ=255)             cAATATTCCGAGCATCAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCAtttt                                                                                                                         >  2:138213/1‑138 (MQ=255)                tattccGAGCATCAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTa                                                                                                                     <  5:336619/135‑1 (MQ=255)                  ttccGAGCATCAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTa                                                                                                                     >  8:121982/3‑137 (MQ=255)                       aGCATCAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAat                                                                                                              >  7:108449/1‑139 (MQ=255)                       aGCATCAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAat                                                                                                              <  6:189388/139‑1 (MQ=255)                       aGCATCAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACAACCATTTTTCTAAAGCAat                                                                                                              >  4:295379/1‑139 (MQ=255)                       aGCATCAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTGTCAGGGCATCGATTCGTTTTCCGTGAATCACGACATCGATGATGCTTTGCTCAATGTGAACACCGTTTTTTCTAAAGAAat                                                                                                              >  4:293198/1‑139 (MQ=255)                           tcaGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAatcgat                                                                                                          <  4:130236/137‑1 (MQ=255)                           tcaGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCAGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAatcgat                                                                                                          <  6:276678/137‑1 (MQ=255)                            caGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAatcgatc                                                                                                         >  5:346565/2‑139 (MQ=255)                            caGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAatcgatc                                                                                                         >  4:20245/2‑139 (MQ=255)                                  aaTCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTc                                                                                                   <  7:121982/139‑1 (MQ=255)                                        tGTACCTGAATTTACGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTAGCTCAATGTGAACACCCATTTATCTAAAGCAAACGATCGTGCTCAGACa                                                                                              >  3:157610/1‑138 (MQ=255)                                                aaTTTCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTc                                                                                      <  1:138213/138‑1 (MQ=255)                                                  tttCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCg                                                                                   >  7:158916/1‑139 (MQ=255)                                                    tCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTaa                                                                                                                    >  4:242509/1‑104 (MQ=255)                                                    tCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTaa                                                                                                                    <  3:242509/104‑1 (MQ=255)                                                    tCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCgg                                                                                  >  4:112831/1‑138 (MQ=255)                                                    tCCGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCgg                                                                                  >  7:211433/1‑138 (MQ=255)                                                      cGACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCgg                                                                                  >  3:37058/1‑136 (MQ=255)                                                       gACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGGACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGa                                                                              <  6:173554/139‑1 (MQ=255)                                                       gACATCTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGa                                                                              <  8:211433/139‑1 (MQ=255)                                                            cTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTa                                                                                                                     <  1:376539/95‑1 (MQ=255)                                                            cTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTa                                                                                                                     >  2:376539/1‑95 (MQ=255)                                                            cTAAAAGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAATGtt                                                                         >  7:47262/1‑139 (MQ=255)                                                                 aGGCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGtttttaa                                                                    <  8:158916/139‑3 (MQ=255)                                                                   gCTTTCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTaact                                                                  <  1:114363/139‑2 (MQ=255)                                                                      ttCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGa                                                                              <  3:100418/124‑1 (MQ=255)                                                                      ttCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTgtt                                                               >  4:379438/1‑139 (MQ=255)                                                                      ttCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCAATTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGa                                                                              >  4:100418/1‑124 (MQ=255)                                                                       tCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGtttttaa                                                                    >  3:187752/1‑131 (MQ=255)                                                                       tCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGtttttaa                                                                    <  4:187752/133‑3 (MQ=255)                                                                       tCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTgttg                                                              >  5:178919/1‑139 (MQ=255)                                                                       tCTGGCTCTTTCAGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTgttg                                                              >  1:152939/1‑139 (MQ=255)                                                                           gctctttcaGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTgttgtt                                                            <  8:182493/131‑1 (MQ=255)                                                                              ctttcaGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGcc                                                       >  8:337236/4‑139 (MQ=255)                                                                              ctttcaGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGcc                                                       >  4:142062/4‑139 (MQ=255)                                                                                 tcaGGGCATCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGcc                                                       <  3:112831/136‑1 (MQ=255)                                                                                         tCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGa                                                                              >  2:88299/1‑105 (MQ=255)                                                                                         tCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGa                                                                              <  1:88299/105‑1 (MQ=255)                                                                                         tCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAgcg                                            <  8:266131/139‑1 (MQ=255)                                                                                         tCGATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAgcg                                            >  2:285922/1‑139 (MQ=255)                                                                                           gATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAgcgcg                                          <  1:194218/139‑1 (MQ=255)                                                                                           gATTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAgcgcg                                          <  1:389875/139‑1 (MQ=255)                                                                                            aTTCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAgcgcgc                                         >  6:428019/1‑139 (MQ=255)                                                                                             ttCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGcc                                        <  6:346565/139‑1 (MQ=255)                                                                                             ttCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGcc                                        <  3:144481/139‑1 (MQ=255)                                                                                             ttCCTTTTCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGcc                                        <  8:115960/139‑1 (MQ=255)                                                                                                 ttttCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATATGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGACTGCAGCTAGCGCGCCaaa                                     >  8:406894/2‑138 (MQ=255)                                                                                                  tttCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCTGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGCCatcc                                    >  5:237749/1‑135 (MQ=255)                                                                                                   ttCCGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGCCAAACa                                   >  7:15953/1‑138 (MQ=255)                                                                                                     ccGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTa                                                                                                                     >  4:121758/1‑54 (MQ=255)                                                                                                     ccGTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTa                                                                                                                     <  3:121758/54‑1 (MQ=255)                                                                                                       gTGAATCACGACATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGCCAAACAtaa                                >  4:146550/1‑135 (MQ=255)                                                                                                              acgaCATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGCCAAACATAACAGAGCGGt                       <  5:428019/136‑1 (MQ=255)                                                                                                              acgaCATCGCTGCTGCTTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGATCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCTCCAAACATAACAGAGCGGt                       <  7:406894/136‑1 (MQ=255)                                                                                                                     cgctgctgctTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGAGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTCTTGTTGTGCCTGCCGCTAGCGCGCCAAACATAACATAGCGGTGAGAAAt                >  2:109452/2‑139 (MQ=255)                                                                                                                      gctgctgctTTGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGCCAAACATAACAGAGCGGTGAGAAAt                <  8:259418/138‑1 (MQ=255)                                                                                                                            gctttGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGCCAAACATAACAGAGCGGTGAGAAATGGATTTa         >  4:379699/3‑139 (MQ=255)                                                                                                                                tGCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGCCAAACATAACAGAGCGGTGAGAAATGGATTTATCAc     >  8:185996/1‑139 (MQ=255)                                                                                                                                 gCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGCCAAACATAACAGAGCGGTGAGAAATGGATTTATCAc     <  7:2929/138‑1 (MQ=255)                                                                                                                                 gCTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGCCAAACATAACAGAGCGGTGAGAAATGGATTTATCAc     <  2:152939/138‑1 (MQ=255)                                                                                                                                  cTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGCCAAACATAACAGAGCGGTGAGAAATGGATTTATCAccg   >  6:379394/1‑138 (MQ=255)                                                                                                                                  cTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGCCAAACATAACAGAGCGGTGAGAAATGGATTTATCAccg   >  1:336678/1‑138 (MQ=255)                                                                                                                                  cTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGCCAAACATAACAGAGCGGTGAGAAATGGATTTATCAccg   >  1:121878/1‑138 (MQ=255)                                                                                                                                  cTCAATGTGAACACCCATTTTTCTAAAGCAATCGATCGGGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTGGCGCGCCAAACATAACAGACCGGTGAGAAATGGATTTATCAccg   >  4:87160/1‑138 (MQ=255)                                                                                                                                     aaTGTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCTGCTCCCGGCAGAAAGTTTTTAACTGTTGTTGTGCCTGCCGCTAGCGCGCCAAACATAACAGAGCGGTGAGAAATGGATTTATCAccgg  <  3:379699/137‑3 (MQ=255)                                                                                                                                        |                                                                                                                                      AGGACGGCCCGCCAAAATGCCGAGCATGAGGCGAATCGTTGTACCTGAATTTCCGACATCTAAAAGGCTTTCTGGCTCACTCAGGGAATCGATTCCATTTCCGTGAATCACTACATTGCTGCCGTTTTGCTCAATTTGAACACCCATTTTTCTAAAGCAATCGATCGTGCTCAGACAATCCGCTCCCGGCAGAAAGTTTTTCACAGTTGTTGTGCCCTTCGCTAGCGCGCCAAACATGACGGAACGGTGAGAAATGGATTTATCACCAG  >  CP006881/2186786‑2187054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑