Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,187,295 C→T V311V (GTG→GTA)  U712_10960 ← Prephenate dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,187,2950CT100.0% 217.3 / NA 70V311V (GTG→GTA) U712_10960Prephenate dehydrogenase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (39/31);  total (39/31)

TGCCCGTTTGCGGTCGTCATCAGACTGAAAACTGATCCTTAAAATCCCGTTAATATCTTCTCGTGTTTCAATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATAGCCGTTATCTCGGAAATCACACCGGGATGATCGGGAACATCCACATATAAATCGTAAAATGCAGGTATCGCGCCCTTCTGCCGAAGCGGCAGTCCGTCGCGATAATCCTTGGCCGTTTTAAAATAACGAAATAGATTTTCGGCATCTTC  >  CP006881/2187163‑2187426
                                                                                                                                    |                                                                                                                                   
tGCCCTTTTGTGGTCGTCATCAGACTGAAAACTGATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACAccc                                                                                                                               >  7:103474/1‑138 (MQ=255)
tGCCCTTTTGCGGTCGTCATCAGACTGAAAACTGATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATAATTCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGGTTTTATCTCGGATATTACAccc                                                                                                                               >  7:72598/1‑138 (MQ=255)
  cccTTTTGCGGTCGTCCTCAGACTGAAAACTGATCCTTAAAATACCGTTAATATACTCTCGTGTTTCGATAATGCGGCTATTCGTGATTCTGATGCGCGCCGCAGCTAAGATAGCTGTTATCTAGGATATTACACCcgg                                                                                                                             >  2:403945/1‑139 (MQ=255)
  cccTTTTGCGGTCGTCATCAGACTGAAAACTGATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATTATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCcgg                                                                                                                             >  7:183922/1‑139 (MQ=255)
  cccTTTTGCGGTCGTCATCAGACTGAAAACTGATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACAcc                                                                                                                                <  8:119648/136‑1 (MQ=255)
  cccTTTTGCGGTCGTCATCAGAATGAAAACTGATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACAcc                                                                                                                                <  8:209383/136‑1 (MQ=255)
   ccttttGCGGTCGTCATCAGACTGAAAACTGATCCTTAAACTCCCGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGga                                                                                                                            <  2:122822/136‑1 (MQ=255)
       ttGCGGTCGTCATCAGACTGAAAACTGATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGgatgat                                                                                                                        >  5:327807/1‑139 (MQ=255)
       ttGCGGTCGTCATCAGACTGAAAACTGATCCTTAAAATCCCATTAATATCCTCTCGTGTTTCGATAATTCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGgatgat                                                                                                                        >  1:201789/1‑139 (MQ=255)
        tGCGGTCGTCATCAGACTGAAAACTGATCCTTAAAATCCCGTTAATATCCTCTCGTGTGTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGgatgat                                                                                                                        <  3:87160/138‑1 (MQ=255)
          cGGTCGTGATGAGACAGAAAAATGATCGTTTAAATCCCGTTAATATACTGTGGGTGTTAGATTATGCGGTTATTCGTGTTTCTGTTTCGCTCCGCAGCTAAGATCGCTGGTATCTAGGATTTTACCCCCGGCTGATCgg                                                                                                                     >  2:191320/1‑139 (MQ=255)
           ggTCGTCATCAGACTGAAAACTGATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCggg                                                                                                                    >  5:313491/1‑139 (MQ=255)
            gtcgtcATCAGACTGAAAACTGATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCgggt                                                                                                                   >  6:425829/1‑138 (MQ=255)
            gtcgtcATCAGACTGAAAACTGATCCTTAAAATCCCGTTAATATACTCTCGTGTTTCGATAATGCGGATATTAGTGATACTGATTCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCggg                                                                                                                    >  2:137171/1‑138 (MQ=255)
               gtcATCAGACTGAATACTGATCCTTAAAATCCCGTTAATATCCTCTCGTGGTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACa                                                                                                                <  4:359708/139‑1 (MQ=255)
                  atcaGACTGAAAACTGATCCTTAAACTCCCGATAATATCCTCTCGGGTTTCGATAATGCGGATATTCGTGATACTGAGGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATcc                                                                                                             <  8:408980/139‑1 (MQ=255)
                  atcaGACTGAAAACTGATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATc                                                                                                              <  2:19436/138‑1 (MQ=255)
                  atcaGACTGAAAACTGATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATc                                                                                                              <  5:53910/138‑1 (MQ=255)
                  atcaGACTGAAAACTGATCCTTAAAATCCCATTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATc                                                                                                              <  2:201789/138‑1 (MQ=255)
                       aCTGAAAACTGATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACata                                                                                                        >  5:45805/1‑139 (MQ=255)
                           aaaaCTGATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATaaa                                                                                                    >  4:343723/1‑139 (MQ=255)
                           aaaaCTGATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATaa                                                                                                     >  6:252028/1‑138 (MQ=255)
                              aCTGATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATca                                                                                                 <  1:403945/139‑2 (MQ=255)
                                 gATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCgggta                                                                                                                  <  1:257572/119‑3 (MQ=255)
                                 gATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCgggta                                                                                                                  >  2:257572/1‑117 (MQ=255)
                                 gATCCTTAAAATCCCGTTAATATCCTCTCGTGTTTAGATAATGCGGATAATCGTCATAATGATGCGCTCCGCAGCTAAGATCGCAGTTATCTCGGAAATTACACCAGTATGAACGGGTAAATACACAAAAAAATCATa                                                                                               >  2:150206/1‑138 (MQ=255)
                                              ccGTTAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATc                                                                                  <  8:15953/138‑1 (MQ=255)
                                                 ttAATATCCTCTCGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATcgctc                                                                              >  1:165845/1‑137 (MQ=255)
                                                          tctcGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGc                                                                                         >  2:396279/1‑119 (MQ=255)
                                                          tctcGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGc                                                                                         <  1:396279/119‑1 (MQ=255)
                                                           ctcGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACGTCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGcc                                                                     >  3:62982/1‑138 (MQ=255)
                                                            tcGTGTTTCGATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCg                                                                    >  7:266116/1‑138 (MQ=255)
                                                                   tcgataatGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCgg                                                              >  3:292274/4‑137 (MQ=255)
                                                                         atGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGt                                                      <  5:425829/139‑1 (MQ=255)
                                                                         atGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGt                                                      <  2:357600/139‑1 (MQ=255)
                                                                              gATATTCGTGCAACGGCTGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATAATACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGCTATCGCTCCCTTCTGCCGAACCGGCAGCCCGTCGCGa                                                 <  4:46357/139‑1 (MQ=255)
                                                                              gATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTCTCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGa                                                 <  5:305856/139‑1 (MQ=255)
                                                                              gATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGa                                                 <  3:343723/139‑1 (MQ=255)
                                                                              gATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGa                                                 <  8:356384/139‑1 (MQ=255)
                                                                              gATATTCGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGa                                                 <  5:252028/139‑1 (MQ=255)
                                                                                    cGTGATACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTGCTGCCGAAGCGGCAGCCCGTCGCGATAATcc                                           >  2:386309/1‑139 (MQ=255)
                                                                                        aTACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTgg                                       <  8:342683/139‑1 (MQ=255)
                                                                                        aTACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTgg                                       <  6:313491/139‑1 (MQ=255)
                                                                                         tACTGATGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGATGCGGCAGCCCGTCGCGATAATACTTGGc                                      >  8:122554/1‑139 (MQ=255)
                                                                                              aTGCGCTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTGGCTGttt                                 >  6:360251/1‑139 (MQ=255)
                                                                                              aTGCGCTCCGCAGCAAAGATAGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATAATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGAGGCAGCCCCTCGCGAGAAAACTTGGCGGttg                                 >  6:399220/1‑138 (MQ=255)
                                                                                                 cgcTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCgggta                                                                                                                  <  3:387752/55‑3 (MQ=255)
                                                                                                 cgcTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCgggta                                                                                                                  >  4:387752/1‑53 (MQ=255)
                                                                                                 cgcTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGCTAATCCATTGGAGTTTTa                               >  4:250510/1‑138 (MQ=255)
                                                                                                 cgcTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTGGCTGTTTTa                               >  3:402303/1‑138 (MQ=255)
                                                                                                   cTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATa                                                                                               <  5:280467/72‑1 (MQ=255)
                                                                                                   cTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTGGCTGTTTTaaaa                            >  7:161475/1‑139 (MQ=255)
                                                                                                   cTCCGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTGGCTGTTTTaaa                             >  3:367735/1‑138 (MQ=255)
                                                                                                      cGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTGGCTGTTTTAAAATaa                         <  8:183922/139‑1 (MQ=255)
                                                                                                      cGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTGGCTGTTTTAAAATaa                         >  2:271882/1‑139 (MQ=255)
                                                                                                      cGCAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGAGAATCCTTTGCGGTTTTtaaaaa                          >  2:215520/1‑136 (MQ=255)
                                                                                                        cAGCTAAGATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTGGCTGTTTTAAAATAACg                       >  2:86739/1‑139 (MQ=255)
                                                                                                               gATCGCTGTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTGGCTGTTTTAAAATAACGAAATAGa                <  8:287350/139‑1 (MQ=255)
                                                                                                                atcgctgTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTGGCTGTTTTAAAATAACGAAATAGAt               >  7:375350/7‑139 (MQ=255)
                                                                                                                   gctgTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGCCAGCCCGTCGCGATAATCATTGTCTGTTTTAAAATAAAGAAAAACAttt             >  8:224085/4‑138 (MQ=255)
                                                                                                                     tgTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGTAAATCCTTTGGTGTTTTTAAATAAAGAAATAGAatttac          >  4:40424/2‑137 (MQ=255)
                                                                                                                     tgTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTGGCTGTTTTAAAATAACGAAATAGATTTTcc          >  8:274995/2‑138 (MQ=255)
                                                                                                                     tgTTATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCGTGGCTGTTTTAAAATAAAGAAATAGAttttac          >  6:323153/2‑137 (MQ=255)
                                                                                                                       ttATCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTGGCTGTTTTAAAATAACGAAATAGATTTTcc          <  8:375350/137‑2 (MQ=255)
                                                                                                                         aTCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATa                                               >  4:8952/1‑98 (MQ=255)
                                                                                                                         aTCTCGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATa                                               <  3:8952/98‑1 (MQ=255)
                                                                                                                             cGGATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTTGCTGTGTTAAAATAACGAAATAGAGTTTACGCAtct    >  4:303320/1‑137 (MQ=255)
                                                                                                                              ggATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTGGCTGTTTTAAAATAACGAAATAGATTTTCCGCAtcttc  <  1:215520/138‑1 (MQ=255)
                                                                                                                              ggATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTGGCTGTTTTAAAATAACGAAATAGATTTTCCGCAtcttc  <  6:45805/138‑1 (MQ=255)
                                                                                                                              ggATATTACACCCGGATGATCGGGTACATCCACATATAAATCATAAAATGCAGGTATCGCTCCCTTCTGCCGAAGCGGCAGCCCGTCGCGATAATCCTTGGCTGTTTTAAAATAACGAAATAGATTTTCCGCAtcttc  <  4:292274/138‑1 (MQ=255)
                                                                                                                                    |                                                                                                                                   
TGCCCGTTTGCGGTCGTCATCAGACTGAAAACTGATCCTTAAAATCCCGTTAATATCTTCTCGTGTTTCAATAATGCGGATATTCGTGATACTGATGCGCTCCGCAGCTAAGATAGCCGTTATCTCGGAAATCACACCGGGATGATCGGGAACATCCACATATAAATCGTAAAATGCAGGTATCGCGCCCTTCTGCCGAAGCGGCAGTCCGTCGCGATAATCCTTGGCCGTTTTAAAATAACGAAATAGATTTTCGGCATCTTC  >  CP006881/2187163‑2187426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑