Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,188,141 C→G P29P (CCG→CCC)  U712_10960 ← Prephenate dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,188,1410CG98.2% 343.6 / ‑2.5 108P29P (CCG→CCC) U712_10960Prephenate dehydrogenase
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (42/64);  total (43/65)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.14e-01

Only 100 of 108 total aligned reads displayed.

GTGGCAATGATTACTGTGGCTGCTTTTTTTGCACCGCTAATAAACGAATCAGCACGCTCGTCTATCACACCTAATTTTAATGCGGCTACTACCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCCGGATG‑CTCTTTTTTGATCGCTAGCGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTCGATTCATACGTCATCACCTGGTTTATAGACTAAAGAGGTGATATTTGATCAC  >  CP006881/2188010‑2188272
                                                                                                                                   |                                                                                                                                    
gtcgCAATGATTACTGTAGCTGCCTCTTTCACACCGCTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATgat                                                                                                                               >  4:327787/4‑137 (MQ=255)
        gagtACTGTAGCTGCCTCTTTCACACCGCTAAGAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGAGTCCGATTATCCGTTTGCCGGGATG‑ATTTTTTTTg                                                                                                                      <  5:56034/136‑1 (MQ=255)
         aTTACTTTATCTGCCTCTTTCACACCGCTAATAAACGAATCAGCACTCTCGTCTATCACGCCTAATTTTAAAGCCGCTACCGCCTGTTCATCCGAGATGTCGATTCCGATAATCCGTTTTCAGGGATG‑ATTTTTTTTg                                                                                                                      <  6:73843/138‑1 (MQ=255)
         aTTACTGTGGCTGCTTTTTTTGCACCGCTAATAAACGAATCAGCACGCTCGTCTATCACACCTAATTTTAATGCGGCTACTACCTGTTCATCAGAGATGTCGATTCAGATAATCCGTTTGCCCGGATG‑CTCTTTTTTGa                                                                                                                     >  6:344632/1‑139 (MQ=255)
         aTTACTGTAGCTGCCTCTTTCACACCGCTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTg                                                                                                                      <  8:240969/138‑1 (MQ=255)
         aTTACTGTAGCTGCCTCTTTCACACCGCTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTg                                                                                                                      <  1:442764/138‑1 (MQ=255)
         aTTACTGTAGCTGCCTCTTTCACACCGCTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTATGa                                                                                                                     >  1:437823/1‑139 (MQ=255)
         aTTACTGTAGCTGCCTCTTTCACACAGCTAATAAACGAATCAGCACGATCGTCTATCACGCCTTATTTTAATGCCGCTTCCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTg                                                                                                                      <  8:118568/138‑1 (MQ=255)
         aTTACTGAAGCTGACTCTTTCACACCTCTAATATACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCGGCTACAGGCTGTTCATCAGAGATGTCGATTCCGATAATGCGTTTGCCGGGTTG‑ATTTTTTTTg                                                                                                                      <  4:356185/138‑1 (MQ=255)
           tACTGTAGCTGCCTCTTTCACACCGCTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTg                                                                                                                      <  7:393995/136‑1 (MQ=255)
             atgtaGCTGCCTCTTTCACACCGCTAATAAACGAAGCAGCACGATCGTCTATCACGCCTAATTTTACTGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTGTGCCGGGATG‑ATTTTTTTTGATGGc                                                                                                                 <  6:368440/138‑1 (MQ=255)
               gtagctgccTCTTTCACACCGCTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGc                                                                                                                 >  8:196784/4‑137 (MQ=255)
               gtagctgccTCTTTCACACCGCTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGc                                                                                                                 >  7:282254/4‑137 (MQ=255)
                  gctgccTCTTTCACACCGCTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAggg                                                                                                            >  3:289844/1‑137 (MQ=255)
                  gctgccTCTTTCACACCGCTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAggg                                                                                                            >  4:389056/1‑137 (MQ=255)
                  gctgccTCTTTCACACCGCTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAggg                                                                                                            >  7:306275/1‑137 (MQ=255)
                            tcacACCGCTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGaa                                                                                                    <  2:401862/134‑1 (MQ=255)
                             cacACCGCTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAAcc                                                                                                  <  4:76958/136‑1 (MQ=255)
                                aCCGCTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGcc                                                                                               >  5:12672/1‑138 (MQ=255)
                                  cGCTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTAt                                                                                            >  6:50411/1‑139 (MQ=255)
                                    cTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGaa                                                                                                    <  3:134042/129‑1 (MQ=255)
                                    cTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGaa                                                                                                    >  4:134042/1‑129 (MQ=255)
                                    cTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGaa                                                                                                    <  1:284979/129‑1 (MQ=255)
                                    cTAATAAACGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGaa                                                                                                    >  2:284979/1‑129 (MQ=255)
                                            cGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGa                                                                                                     >  5:226429/1‑120 (MQ=255)
                                            cGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGa                                                                                                     <  6:226429/120‑1 (MQ=255)
                                            cGAATCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCgaga                                                                                  >  6:198397/1‑139 (MQ=255)
                                              aaTCAGCACGATCTTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATAAGAGATGTCGATTCCGATAATCCGTTATCCGTGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCATATAAATCAGAGAcc                                                                                >  4:336827/1‑139 (MQ=255)
                                              aaTCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGAcc                                                                                >  5:313158/1‑139 (MQ=255)
                                               aTCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGCCCg                                                                               >  4:2988/1‑139 (MQ=255)
                                               aTCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCg                                                                               >  5:203777/1‑139 (MQ=255)
                                               aTCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCg                                                                               >  1:291839/1‑139 (MQ=255)
                                               aTCAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTAACGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGAAATCGAACCGCCTATCAATCCCAGACCg                                                                               >  7:161799/1‑139 (MQ=255)
                                                 cAGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGc                                                                             <  7:434852/139‑1 (MQ=255)
                                                  aGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCTTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGCACCGCCTATCAATCCGAGACCGGc                                                                             <  5:379106/138‑1 (MQ=255)
                                                  aGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGAGGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCg                                                                            <  5:198397/139‑1 (MQ=255)
                                                  aGCACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATAAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGc                                                                             >  5:396890/1‑138 (MQ=255)
                                                    cacgagcGTCTATCACGCCTAATTTTAAAGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAg                                                                          <  1:166943/133‑1 (MQ=255)
                                                    cACGATCGTCTATCACTCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAg                                                                          <  3:336827/139‑1 (MQ=255)
                                                    cACGATCGTCTATCACGCCTAATTTTAATGCCGGTTCCGCCTGTTCATCAGTGATGTCGATTCCGTTAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAg                                                                          <  1:177932/139‑1 (MQ=255)
                                                    cACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAg                                                                          <  7:330457/139‑1 (MQ=255)
                                                    cACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAg                                                                          <  6:132904/139‑1 (MQ=255)
                                                    cACGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAg                                                                          <  3:327787/139‑1 (MQ=255)
                                                    aaCGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCGTGTTCATCTTAGATGTCGATTCCGTTAATCCGTTTGCCGTGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAg                                                                          <  6:396890/138‑1 (MQ=255)
                                                     aCGATCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGc                                                                         <  3:196138/139‑1 (MQ=255)
                                                      atttCGTGTATCACGCCTAATTTTAATGCCGCTACCTCCTTTTGATCATTGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACGGGCGAGCa                                                                        <  6:328561/136‑1 (MQ=255)
                                                         tCGTCTATCACGCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAata                                                                     <  6:438272/139‑1 (MQ=255)
                                                                 cacgCCTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCt                                                             >  4:215503/1‑139 (MQ=255)
                                                                  aagccTAATTTTAATGCCGCTTCCGCCGGTTCATCATAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGTCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCt                                                             <  3:248454/135‑1 (MQ=255)
                                                                   cgccTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCg                                                                                                      >  3:150603/3‑96 (MQ=255)
                                                                   cgccTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCg                                                                                                      <  4:150603/94‑1 (MQ=255)
                                                                   cgccTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCATATCAATCCGAGACCGGCGAGCAATATTGTATCtt                                                            >  2:328956/3‑138 (MQ=255)
                                                                      cTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCAt                                                        <  3:215503/139‑1 (MQ=255)
                                                                      cTAATTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCAt                                                        <  2:41200/139‑1 (MQ=255)
                                                                        aaTTTTAATGCCGCTACCGCCTGTTCTTCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGCGACCGGCGAGCAATATTGTATATTTCAttt                                                      >  3:87399/1‑138 (MQ=255)
                                                                         aTTTTAATGCGGCTACTACCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCCGGATG‑CTCTTTTTTGATCGCTAGCGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCAtt                                                       <  5:344632/137‑1 (MQ=255)
                                                                         aTTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCAtt                                                       <  4:436173/137‑1 (MQ=255)
                                                                         aTTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCAtt                                                       <  7:228725/137‑1 (MQ=255)
                                                                         aTTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCAtt                                                       <  7:234891/137‑1 (MQ=255)
                                                                         aTTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCAtt                                                       <  8:102544/137‑1 (MQ=255)
                                                                         aTTTTAATGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCAtt                                                       <  2:362833/137‑1 (MQ=255)
                                                                            ttAATGCCGCTACCTCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGAt                                                   <  7:228619/138‑1 (MQ=255)
                                                                              aaTGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCa                                                >  4:404097/1‑139 (MQ=255)
                                                                               aTGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCa                                                <  1:330283/138‑1 (MQ=255)
                                                                               aTGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCa                                                >  2:435699/1‑138 (MQ=255)
                                                                               aTGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCa                                                <  3:99306/138‑1 (MQ=255)
                                                                               aTGCCGCTACCGCCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCAt                                               <  8:306275/139‑1 (MQ=255)
                                                                                         cgccTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATT‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCAc                                     <  5:141383/137‑1 (MQ=255)
                                                                                         cgccTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCAc                                     <  2:111928/137‑1 (MQ=255)
                                                                                         cgccTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCAc                                     <  8:282254/137‑1 (MQ=255)
                                                                                         cgccTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCAc                                     <  4:289844/137‑1 (MQ=255)
                                                                                         cgccTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCAc                                     <  7:196784/137‑1 (MQ=255)
                                                                                         cgccTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCAc                                     <  3:389056/137‑1 (MQ=255)
                                                                                               ttCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAg                                                                          >  4:266852/1‑96 (MQ=255)
                                                                                               ttCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAg                                                                          <  3:266852/96‑1 (MQ=255)
                                                                                               ttCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGtt                               >  6:114538/1‑139 (MQ=255)
                                                                                               ttCATCAGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGtt                               >  5:98118/1‑139 (MQ=255)
                                                                                                   tcaGAGATGTCGATTCCTATAATCCGTTTGCCGGTATG‑ATTTTTTTTGTTGGCTATTGCAATCGAACCGCCTATAAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGTTtata                           <  4:87399/139‑1 (MQ=255)
                                                                                                   tcaGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGTTtata                           <  3:79419/139‑1 (MQ=255)
                                                                                                   tcaGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGTTtata                           <  1:72403/139‑1 (MQ=255)
                                                                                                   tcaGAGATGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGTTtata                           <  5:50411/139‑1 (MQ=255)
                                                                                                         aagTCGATTCCGATAATCCGTTTGCCGGGCTG‑ATTTTTTATGATGGCTAGGGCAATCCAACCGCGTATCAATCCGAGCCCGGCGAGCAAAATTGTATCTTTCATTTGATTCATACGTCATCACCTGGTTTATAGACTa                      >  5:98980/3‑138 (MQ=255)
                                                                                                         aTGTCGATTCCGATAATCCGTTTGCCGGGATGATTTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGTTTATAGACt                       >  2:441670/1‑138 (MQ=255)
                                                                                                         aTGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGCTTCATACGTCCTCACCTGGTGTATAGACTa                      >  3:297339/1‑138 (MQ=255)
                                                                                                         aTGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCAc                                     <  3:388322/123‑1 (MQ=255)
                                                                                                         aTGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCAc                                     >  4:388322/1‑123 (MQ=255)
                                                                                                         aTGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGTTta                             >  4:244499/1‑131 (MQ=255)
                                                                                                         aTGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGTTta                             <  3:244499/131‑1 (MQ=255)
                                                                                                         aTGTCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGTTTATAGACTa                      >  2:343304/1‑138 (MQ=255)
                                                                                                          tggcGATTCCGCTAATCCGTTAGCCGGGATG‑ATTTTTTTTGATGGCTCGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGTTTATAGACTaaa                    <  1:77284/136‑1 (MQ=255)
                                                                                                            tctaTTCGGAAAATCCGTTTGCCGGTATG‑ATTTTTTTTGATGGCTAG‑GCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGTTTATAGACTAAagag                 <  6:13261/136‑1 (MQ=255)
                                                                                                            tCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTAt                                                                                            >  6:146734/1‑65 (MQ=255)
                                                                                                            tCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTAt                                                                                            <  5:146734/65‑1 (MQ=255)
                                                                                                            tCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGttt                              >  5:421017/1‑127 (MQ=255)
                                                                                                            tCGATTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGttt                              <  6:421017/127‑1 (MQ=255)
                                                                                                            tCGATTCCGATAAGCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGCGCAAGATTGTATCTTTCATTTGCTTCATACGTCCTCACCTGGTTTATAGACTaaa                    >  8:113451/1‑137 (MQ=255)
                                                                                                               aTTCCGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGTTTATAGACTAAAGAGGt               <  1:435699/139‑1 (MQ=255)
                                                                                                                   cGATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGTTTATAGACTAAAGAGGTGat            >  7:97528/1‑138 (MQ=255)
                                                                                                                    gATAATCCGTTTGCCGGGATG‑ATTTTTTTTGATGGCTAGGGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGTTTATAGACTAAAGAGGTGatat          <  4:256826/139‑1 (MQ=255)
                                                                                                                            gTTTGCCGGTATG‑ATTTTTTTTGTTGGCTAGGGCAATCGAAACGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTTGATTCATACGTCATCACCTGGTTTATAGACTAAAGAGGTGATATTTGATCAc  <  2:437823/139‑1 (MQ=255)
                                                                                                                                   |                                                                                                                                    
GTGGCAATGATTACTGTGGCTGCTTTTTTTGCACCGCTAATAAACGAATCAGCACGCTCGTCTATCACACCTAATTTTAATGCGGCTACTACCTGTTCATCAGAGATGTCGATTCCGATAATCCGTTTGCCCGGATG‑CTCTTTTTTGATCGCTAGCGCAATCGAACCGCCTATCAATCCGAGACCGGCGAGCAATATTGTATCTTTCATTCGATTCATACGTCATCACCTGGTTTATAGACTAAAGAGGTGATATTTGATCAC  >  CP006881/2188010‑2188272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑