Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,188,570	G→A	I263I (ATC→ATT)	U712_10965 ←	Histidinol‑phosphate aminotransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,188,570	0	G	A	100.0%	301.8 / NA	95	I263I (ATC→ATT)	U712_10965	Histidinol‑phosphate aminotransferase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (51/44);  total (51/44)

AATTAACACAAAGTTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTCTTCGCAAAATCATAATATTGCTGAAGGCCTGTTTTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCGATCGCCGCAGCCTGACCTAGACGGCTCGTGTTAAATGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCAACTCTGAGCGCAGCCAGACCGTAAGCCTTTGAAAATGTCCG  >  CP006881/2188438‑2188704                                                                                                                                     |                                                                                                                                       aaTTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTACACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATcgcc                                                                                                                                  >  4:161427/1‑139 (MQ=255) aaTTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATcgcc                                                                                                                                  >  7:287361/1‑139 (MQ=255)  aTTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATcgccg                                                                                                                                 <  4:359996/139‑1 (MQ=255)  aTTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATcgccg                                                                                                                                 >  8:121487/1‑139 (MQ=255)  aTTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATcgccg                                                                                                                                 <  6:350304/139‑1 (MQ=255)      acacAAAATTTGTCTGTGAAGGGTAGCACTGTAAACAATGAGTGTTCTCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTTGACACAGGAAGCAATAAACGCTTGATCATCACGTGCTGCAATCGCCGCatc                                                                                                                             <  8:345203/139‑3 (MQ=255)      acacAAAATTTGTCTGTGAAGGGTAGCACATTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGc                                                                                                                             <  6:386856/139‑1 (MQ=255)       cacaAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGcc                                                                                                                            <  4:218567/139‑1 (MQ=255)            aatttGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGcc                                                                                                                       <  4:57921/137‑1 (MQ=255)            aatttGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGcc                                                                                                                       <  2:66890/137‑1 (MQ=255)            aatttGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGcc                                                                                                                       <  4:393931/137‑1 (MQ=255)                 gTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATcgccg                                                                                                                                 <  1:358752/124‑1 (MQ=255)                 gTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATcgccg                                                                                                                                 >  2:358752/1‑124 (MQ=255)                  tCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACg                                                                                                                 >  3:251263/1‑139 (MQ=255)                    ggtgAAGGGGAGCACTTTAAACCATTAGTTTTCGCAAAATCATAAAACGGCGGAAGGCCTGCATAATTTTGCGCGACACAGGAAGCAAAAACCGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc                                                                                                               <  2:178434/138‑1 (MQ=255)                      tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAggcggc                                                                                                               <  8:154664/137‑1 (MQ=255)                      tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAg                                                                                                                    >  1:177247/1‑132 (MQ=255)                      tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAg                                                                                                                    <  2:177247/132‑1 (MQ=255)                      tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc                                                                                                               <  7:264992/137‑1 (MQ=255)                      tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc                                                                                                               <  5:193672/137‑1 (MQ=255)                      tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc                                                                                                               <  2:58681/137‑1 (MQ=255)                      tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc                                                                                                               <  7:422397/137‑1 (MQ=255)                      tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCtg                                                                                                             >  7:167841/1‑138 (MQ=255)                      tgAAGGGTAGCACTTTAAACCATGAGTATTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc                                                                                                               <  6:165051/137‑1 (MQ=255)                      tgAAGGGTAGCAATTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGAAATCGCCGCAGCCTGGCCCAGACGGc                                                                                                               <  5:249848/137‑1 (MQ=255)                        aaGGGGAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCtgg                                                                                                            <  7:152736/138‑3 (MQ=255)                         aGGGTAGCACTTTAAACCTTGAGTTTTCGAAAAATCATAATCCTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGgta                                                                                                          <  4:307515/139‑2 (MQ=255)                                cACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTaaacg                                                                                                   >  3:307515/1‑137 (MQ=255)                                     tAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGTTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGctct                                                                                              >  2:147354/1‑139 (MQ=255)                                     tAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCt                                                                                                              <  3:313956/123‑1 (MQ=255)                                     tAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCt                                                                                                              >  4:313956/1‑123 (MQ=255)                                          cATGAGTTTTCGCAAAATCAAAATACTGCTGAAGGCCGGCATAATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCAACAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGc                                                                                         <  4:325462/139‑1 (MQ=255)                                             gAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCgg                                                                                      >  4:276871/1‑139 (MQ=255)                                                  ttCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc                                                                                                               >  5:374901/1‑109 (MQ=255)                                                  ttCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCaa                                                                                 >  3:54180/1‑139 (MQ=255)                                                  ttCGCAAAATCATAATACTGCTGAAGGCCTGAATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc                                                                                                               <  6:374901/109‑1 (MQ=255)                                                       aaaaTCATAATACTGCTGAAGGCCTGCATTATTTTGCGCGACCCAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCGGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTgg                                                                            <  4:172778/139‑1 (MQ=255)                                                        aaaTCATAATACTGCTGATGGCCTGCATTATTTTGCTCGACAACGGAAGCAATAAACGCTTGATAATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGc                                                                           <  8:167841/139‑1 (MQ=255)                                                        aaaTCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGTTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGc                                                                           <  1:147354/139‑1 (MQ=255)                                                                atacTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAgg                                                                   <  8:137706/139‑1 (MQ=255)                                                                   ctGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTtc                                                                >  4:399570/2‑139 (MQ=255)                                                                     gCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTtctc                                                              >  5:446827/1‑139 (MQ=255)                                                                     gCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTtctc                                                              >  1:110133/1‑139 (MQ=255)                                                                     gCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTtctc                                                              >  5:191828/1‑139 (MQ=255)                                                                      cTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc                                                                                                               >  2:380511/1‑89 (MQ=255)                                                                      cTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc                                                                                                               <  1:380511/89‑1 (MQ=255)                                                                      cTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCGGGTTCTCg                                                             >  7:231121/1‑139 (MQ=255)                                                                      cTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTtctc                                                              <  6:383547/138‑1 (MQ=255)                                                                      cTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCg                                                             >  7:50672/1‑139 (MQ=255)                                                                      cTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCg                                                             >  2:400204/1‑139 (MQ=255)                                                                      cTGAAGGCCTGCATTATTTTGATCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCACCGACGGCTGGTATTAAACGGCTCTCTCGCCGCCTCAATCTGGCGAATCAGGTtctct                                                             >  7:373836/1‑138 (MQ=255)                                                                           ggCGTGCTTTTTTTTGCTCGAAATATTAATAAATATAGGCTTTATCAGAAAGTGTTGTATTGGCCGCAGCCTGGCCCAGAGGGGTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAg                                                         <  8:373836/138‑1 (MQ=255)                                                                           ggCCTTATTTATTTTGCTCGACACTGTAAGCAAAAAAGGCTTGATCATCATGTGCTCAAAGCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAg                                                         <  2:225105/138‑1 (MQ=255)                                                                           ggCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAg                                                         >  3:414548/1‑138 (MQ=255)                                                                                gcattATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGCCGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTc                                                   >  8:386369/4‑139 (MQ=255)                                                                                gcattATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCTGCAATTc                                                   >  1:192365/4‑139 (MQ=255)                                                                                gcattATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTc                                                   >  5:373400/4‑139 (MQ=255)                                                                                gcattATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTc                                                   >  6:355335/4‑139 (MQ=255)                                                                                gcattATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAAGCAGGTTCTCGTCAGCAATTc                                                   >  4:61087/4‑139 (MQ=255)                                                                                 cattATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAAtt                                                    <  6:373400/135‑1 (MQ=255)                                                                                 cattATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTcc                                                  <  6:191828/137‑1 (MQ=255)                                                                                           cTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc                                                                                                               >  8:307583/1‑68 (MQ=255)                                                                                           cTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc                                                                                                               <  7:307583/68‑1 (MQ=255)                                                                                           cTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGAct                                        >  1:340078/1‑139 (MQ=255)                                                                                           cTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGAct                                        >  1:54520/1‑139 (MQ=255)                                                                                           cTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGAct                                        >  1:81686/1‑139 (MQ=255)                                                                                           cTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGAct                                        >  3:436514/1‑139 (MQ=255)                                                                                           cTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGAct                                        >  4:116415/1‑139 (MQ=255)                                                                                           cTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGAct                                        >  1:16441/1‑139 (MQ=255)                                                                                              gACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGActc                                       <  5:226447/137‑1 (MQ=255)                                                                                              gACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGActc                                       <  4:54180/137‑1 (MQ=255)                                                                                                cacaGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAg                                   <  7:121487/139‑1 (MQ=255)                                                                                                cacaGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAg                                   >  5:7256/1‑139 (MQ=255)                                                                                                cacaGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAg                                   <  3:116415/139‑1 (MQ=255)                                                                                                cacaGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAg                                   <  5:98630/139‑1 (MQ=255)                                                                                                        gCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCa                           <  5:355335/139‑1 (MQ=255)                                                                                                          aaTAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAgc                         >  8:233972/1‑138 (MQ=255)                                                                                                          aaTAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGa                         >  6:18784/1‑139 (MQ=255)                                                                                                               aCGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCAGCCAGACCGTa                    >  8:331873/1‑139 (MQ=255)                                                                                                                cGCTTTATCATCCTGGGCGGCAAGCGCCGCCGCCGGGCCCAGACGGCGGGTATTACACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCGCGGCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTat                   <  3:276871/139‑2 (MQ=255)                                                                                                                  cTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGc                 <  3:399570/139‑1 (MQ=255)                                                                                                                   ttGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTtctc                                                              >  3:211175/1‑93 (MQ=255)                                                                                                                   ttGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTtctc                                                              <  4:211175/93‑1 (MQ=255)                                                                                                                   ttGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGcc                >  3:183573/1‑139 (MQ=255)                                                                                                                   ttGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGcc                >  7:150838/1‑139 (MQ=255)                                                                                                                   ttGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCACAGCCGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGCCCGTAAGcc                >  3:305509/1‑139 (MQ=255)                                                                                                                    tGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCt               >  1:137749/1‑139 (MQ=255)                                                                                                                    tGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCt               >  1:346439/1‑139 (MQ=255)                                                                                                                    tGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCt               >  1:385611/1‑139 (MQ=255)                                                                                                                               tgctgcAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGtg    >  7:130745/1‑138 (MQ=255)                                                                                                                                 ctgcAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCg  >  1:336420/1‑139 (MQ=255)                                                                                                                                 ctgcAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCg  >  1:421524/1‑139 (MQ=255)                                                                                                                                 ctgcAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTACGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCg  >  7:104460/1‑139 (MQ=255)                                                                                                                                  tgcAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGActc                                       <  3:82177/101‑1 (MQ=255)                                                                                                                                  tgcAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGActc                                       >  4:82177/1‑101 (MQ=255)                                                                                                                                     |                                                                                                                                       AATTAACACAAAGTTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTCTTCGCAAAATCATAATATTGCTGAAGGCCTGTTTTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCGATCGCCGCAGCCTGACCTAGACGGCTCGTGTTAAATGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCAACTCTGAGCGCAGCCAGACCGTAAGCCTTTGAAAATGTCCG  >  CP006881/2188438‑2188704

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑