Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,188,702	C→G	R219R (CGG→CGC)	U712_10965 ←	Histidinol‑phosphate aminotransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,188,702	0	C	G	100.0%	290.2 / NA	87	R219R (CGG→CGC)	U712_10965	Histidinol‑phosphate aminotransferase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (39/48);  total (39/48)

CTGCGATCGCCGCAGCCTGACCTAGACGGCTCGTGTTAAATGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCAACTCTGAGCGCAGCCAGACCGTAAGCCTTTGAAAATGTCCGCAATATGATCAGATTGGAATACTTGTTTAATAACGGCACAGTTTCCGGGTAATCCTCAGCTGTTACATATTCATAATATGCTTCGTCAAGAACAACGAGGACATGAGAAGGAACGCGCTCCAGAAAT  >  CP006881/2188566‑2188831                                                                                                                                         |                                                                                                                                  ctgcAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCg                                                                                                                                 >  1:336420/1‑139 (MQ=255) ctgcAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCg                                                                                                                                 >  1:421524/1‑139 (MQ=255) ctgcAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTACGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCg                                                                                                                                 >  7:104460/1‑139 (MQ=255)         gccgcAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAaaatca                                                                                                                         >  6:121740/1‑137 (MQ=255)             cAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAAtcatcaa                                                                                                                     <  4:183573/139‑2 (MQ=255)                       caGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCGGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATAc                                                                                                           <  8:231121/138‑1 (MQ=255)                       caGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATAc                                                                                                           <  2:340078/138‑1 (MQ=255)                       caGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATAc                                                                                                           <  6:446827/138‑1 (MQ=255)                        aGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACt                                                                                                          <  8:104460/139‑1 (MQ=255)                        aGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACt                                                                                                          <  2:336420/139‑1 (MQ=255)                          aCGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTg                                                                                                        >  3:408076/1‑139 (MQ=255)                          aCGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTg                                                                                                        >  6:136865/1‑139 (MQ=255)                             gCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGctt                                                                                                     <  1:232433/139‑1 (MQ=255)                              ctggtattAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACt                                                                                                          >  7:49478/7‑133 (MQ=255)                              ctggtattAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACt                                                                                                          <  8:49478/127‑1 (MQ=255)                              ctggtattAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCAGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGctt                                                                                                     >  8:266886/7‑138 (MQ=255)                                      aaaCGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCgg                                                                                             >  6:57922/1‑138 (MQ=255)                                      aaaCGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGc                                                                                            >  6:407509/1‑139 (MQ=255)                                       aacggCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTCTCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAATTTGGAATACTTGCTTAAGAGCGGca                                                                                           <  4:429241/136‑1 (MQ=255)                                       aacggCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGca                                                                                           <  2:137749/136‑1 (MQ=255)                                       aacggCTCTCTCGAAGGCTCTATCTTGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGATCTCTGCCAGACCGTTTGCGTTTGATTATGTGGGGAAAATCATGAAATTGGAATACTTGCTTAAGAGCGGca                                                                                           <  6:7256/136‑1 (MQ=255)                                           gCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGa                                                                                                               <  2:259377/115‑1 (MQ=255)                                           gCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGa                                                                                                               >  1:259377/1‑115 (MQ=255)                                            ctctctCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGca                                                                                           >  7:20009/1‑134 (MQ=255)                                            ctctctCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGca                                                                                           <  8:288756/134‑1 (MQ=255)                                            ctctctCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGca                                                                                           >  7:288756/1‑134 (MQ=255)                                            ctctctCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGca                                                                                           <  8:20009/134‑1 (MQ=255)                                            ctctctCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGtt                                                                                      >  5:326043/1‑139 (MQ=255)                                            ctctctCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGtt                                                                                      >  7:160710/1‑139 (MQ=255)                                            ctctctCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGtt                                                                                      >  5:407914/1‑139 (MQ=255)                                            ctctctCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGtt                                                                                      >  1:214100/1‑139 (MQ=255)                                            ctctctCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGtt                                                                                      >  5:300993/1‑139 (MQ=255)                                             tctctcGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGttt                                                                                     <  8:160710/139‑1 (MQ=255)                                             gctctcGCCGGCGCAAGCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGttt                                                                                     <  2:191401/138‑1 (MQ=255)                                               tctcGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGttt                                                                                     <  7:52298/137‑1 (MQ=255)                                               tctcGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGttt                                                                                     <  5:57922/137‑1 (MQ=255)                                               tctcGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGttt                                                                                     <  5:407509/137‑1 (MQ=255)                                               tctcGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGttt                                                                                     <  8:150838/137‑1 (MQ=255)                                                  cGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCggg                                                                                <  2:385611/139‑1 (MQ=255)                                                      ggCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGca                                                                                           <  4:346096/124‑1 (MQ=255)                                                      ggCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGca                                                                                           >  3:346096/1‑124 (MQ=255)                                                          cAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTc                                                                        <  2:184314/139‑1 (MQ=255)                                                           aaTCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCt                                                                         <  5:18784/137‑1 (MQ=255)                                                           aaTCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCt                                                                         <  7:233972/137‑1 (MQ=255)                                                           aaTCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCt                                                                         <  7:386369/137‑1 (MQ=255)                                                           aaTCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTc                                                                        <  8:130745/138‑1 (MQ=255)                                                            aTCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTctg                                                                      <  2:346439/139‑3 (MQ=255)                                                            aTCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTctg                                                                      <  3:120030/139‑3 (MQ=255)                                                                 gCGAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCt                                                                    <  4:408076/136‑1 (MQ=255)                                                                   gAATCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTAc                                                               <  2:421524/139‑1 (MQ=255)                                                                    aaTCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACa                                                              <  6:326043/139‑1 (MQ=255)                                                                    aaTCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACa                                                              <  1:400204/139‑1 (MQ=255)                                                                    aaTCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACa                                                              <  7:331873/139‑1 (MQ=255)                                                                     aTCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACat                                                             <  2:16441/139‑1 (MQ=255)                                                                     aTCAGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACat                                                             <  2:54520/139‑1 (MQ=255)                                                                        aGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTTCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACatat                                                           <  6:407914/138‑1 (MQ=255)                                                                        aGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCTTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACatat                                                           <  2:110133/138‑1 (MQ=255)                                                                        aGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACatat                                                           <  3:161427/138‑1 (MQ=255)                                                                        aGGTTCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACatat                                                           <  5:136865/138‑1 (MQ=255)                                                                           ttCTCGTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCa                                                        >  2:135464/1‑138 (MQ=255)                                                                                gTCAGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAatat                                                  >  7:360745/1‑139 (MQ=255)                                                                                   aGCAATTCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCt                                               <  2:81686/139‑1 (MQ=255)                                                                                        ttCCGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTc                                          <  6:300993/139‑1 (MQ=255)                                                                                        ttCCGTATCCGACTCTGAGCGCGGCCAGACCGTATGCCTTTGAAAATTCGCGCAAAATCATCAAATTGGAATCCTTGATTAAGCGCGGCACGGTTTCCGGGAAATCCTCTGCTGTTACATAATCATAATATGCTTCGTc                                          <  4:251263/139‑1 (MQ=255)                                                                                          ccGTATCCGACTCTGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTc                                          >  3:227736/1‑137 (MQ=255)                                                                                                    ctctGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAGAACGACTAg                              >  4:66739/1‑139 (MQ=255)                                                                                                       tGAGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAGAACGACAAGGa                            >  7:428205/1‑138 (MQ=255)                                                                                                         aGCGCTGGCAGACCGTATGCCTTTGAAAATGTGAGCAAAATCATAAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAGAACGACAAGGACac                         <  4:414548/139‑2 (MQ=255)                                                                                                         aGCGCTGCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAGAACGACAAGGACac                         >  2:442379/1‑138 (MQ=255)                                                                                                              tgCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAg                                       >  7:278971/2‑120 (MQ=255)                                                                                                              tgCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAg                                       <  8:278971/119‑1 (MQ=255)                                                                                                              tgCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAGAACGACAAGGACACgag                      >  3:409804/2‑137 (MQ=255)                                                                                                              tgCCAGACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGATGTTACATATTAATAATATGCTTCGTCAAGAACTACAAGGACACgag                      >  2:158731/2‑137 (MQ=255)                                                                                                                   gACCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAGAACGACAAGGACACGAGAAGGAAc               >  6:71750/1‑139 (MQ=255)                                                                                                                    aCCGTATGCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAGAACGACAAGGACACGAGAAGGAAcg              <  8:50672/139‑1 (MQ=255)                                                                                                                      cGTATGCCTTTGAATATGTGCGCAATATCATCAAATTGTAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATTCTTCGTCAAGAACGACAAGGACACGAGAAGGAAcgcg            <  7:266886/139‑1 (MQ=255)                                                                                                                        tatgCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAGAACTACAAGGACACGAGAAGGAACGCGCt          >  7:33739/4‑139 (MQ=255)                                                                                                                        tatgCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAGAACGACAAGGACACGAGAAGGAACGCGCt          >  4:193347/4‑139 (MQ=255)                                                                                                                        tatgCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAGAACGACAAGGACACGAGAAGGAACGCGCt          >  8:407913/4‑139 (MQ=255)                                                                                                                        tatgCCTTTGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAGAACGACAAGGACACGAGAAGGAACGCGCt          >  4:12827/4‑139 (MQ=255)                                                                                                                               ttGAAAATGTGCGCAAACTCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGGAATCCTCTGCTGGTACCTATTCATAATATGCTTCGTCAAGCACGACAAGGACACGAGAAGGAACGCGCTCCAgc     >  8:33512/1‑136 (MQ=255)                                                                                                                               ttGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAGAACGACAAGGACACGAGAAGGAACGCGCTCCAGaaa   >  6:117037/1‑139 (MQ=255)                                                                                                                                tGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAg                                       >  5:395160/1‑102 (MQ=255)                                                                                                                                tGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAg                                       <  6:395160/102‑1 (MQ=255)                                                                                                                                tGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAGAACGACAAGGACACGAGAAGGAACGCGCTCCAGAAAt  >  2:96761/1‑139 (MQ=255)                                                                                                                                tGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAGAACGACAAGGACACGAGAAGGAACGCGCTCCAGAAAt  >  4:396595/1‑139 (MQ=255)                                                                                                                                tGAAAATGTGCGCAAAATCATCAAATTGGAATACTTGCTTAAGAGCGGCACGGTTTCCGGGTAATCCTCTGCTGTTACATATTCATAATATGCTTCGTCAAGAACGACAAGGACACGAGAAGGAACGCGCTCCAGAAAt  >  2:286635/1‑139 (MQ=255)                                                                                                                                         |                                                                                                                                  CTGCGATCGCCGCAGCCTGACCTAGACGGCTCGTGTTAAATGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAGCAATTCCGTATCCAACTCTGAGCGCAGCCAGACCGTAAGCCTTTGAAAATGTCCGCAATATGATCAGATTGGAATACTTGTTTAATAACGGCACAGTTTCCGGGTAATCCTCAGCTGTTACATATTCATAATATGCTTCGTCAAGAACAACGAGGACATGAGAAGGAACGCGCTCCAGAAAT  >  CP006881/2188566‑2188831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑