| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,188,518 | 2 bp→CA | coding (840‑841/1083 nt) | U712_10965 ← | Histidinol‑phosphate aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,188,518 | 0 | T | C | 97.6% | 264.5 / NA | 83 | T281A (ACA→GCA) | U712_10965 | Histidinol‑phosphate aminotransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (38/43); minor base A (0/2); total (38/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | CP006881 | 2,188,519 | 0 | T | A | 97.6% | 254.3 / NA | 82 | K280N (AAA→AAT) | U712_10965 | Histidinol‑phosphate aminotransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/2); new base A (38/42); total (38/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCCTTTTTCCAGCAGAGCCTGAAACAGTTCATCGGAAGGGCGGTTAAAATCAATTAACACAAAGTTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTCTTCGCAAAATCATAATATTGCTGAAGGCCTGTTTTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCGATCGCCGCAGCCTGACCTAGACGGCTCGTGTTAAATGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAG > CP006881/2188387‑2188649 || gCCTTTTTCCAGCAGAGCCTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCattatt < 8:92592/138‑1 (MQ=255) ccTTTTTCCAGCAGAGCCTGAAACAGTTCATCAGCAGGAAGTTTAAAGTCAATTACCACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGACTGCATTAtttt > 3:429241/1‑139 (MQ=255) tttCCAGCAGAGCCTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCt < 4:177280/138‑1 (MQ=255) ttCCAGCAGAGCCTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTc > 4:172552/1‑138 (MQ=255) ttCCAGCAGAGCCTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTc > 7:137706/1‑138 (MQ=255) ttCCAGCAGAGCCTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTc > 5:383547/1‑138 (MQ=255) ttCCAGCAGAGCCTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTc > 1:58681/1‑138 (MQ=255) cagcagAGCCTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGaca < 3:172552/139‑1 (MQ=255) cagcagAGCCTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAAATAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGaca < 2:292025/139‑1 (MQ=255) gcagAGCCTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGaca > 2:232433/1‑137 (MQ=255) agagCCTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAgg < 7:173281/139‑1 (MQ=255) agagCCTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAgg < 2:317393/139‑1 (MQ=255) gatccTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAATTATCACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGa < 8:328767/136‑1 (MQ=255) gCCTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAg < 2:162368/139‑1 (MQ=255) gCCTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAg < 4:204401/139‑1 (MQ=255) ccTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCCCTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAg > 5:386856/1‑138 (MQ=255) ccTGAAACAGTTCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAg > 6:98630/1‑138 (MQ=255) ttCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCt > 4:258324/1‑116 (MQ=255) ttCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCt < 3:258324/116‑1 (MQ=255) ttCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACATGAAGCAATAAACGCt < 1:396504/139‑1 (MQ=255) ttCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCt > 8:264992/1‑139 (MQ=255) ttCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCt > 8:152736/1‑139 (MQ=255) ttCATCAGCAGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCt > 4:120030/1‑139 (MQ=255) atcagcaGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGa < 6:210752/133‑1 (MQ=255) cagcaGGACGTTTAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGat > 5:350304/5‑138 (MQ=255) ggacgtttAAAGTCAATTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGatcatc > 8:52298/7‑137 (MQ=255) aaTTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTACACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATcgcc > 4:161427/1‑139 (MQ=255) aaTTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATcgcc > 7:287361/1‑139 (MQ=255) aTTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATcgccg < 4:359996/139‑1 (MQ=255) aTTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATcgccg < 6:350304/139‑1 (MQ=255) aTTAACACAAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATcgccg > 8:121487/1‑139 (MQ=255) acacAAAATTTGTCTGTGAAGGGTAGCACTGTAAACAATGAGTGTTCTCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTTGACACAGGAAGCAATAAACGCTTGATCATCACGTGCTGCAATCGCCGCatc < 8:345203/139‑3 (MQ=255) acacAAAATTTGTCTGTGAAGGGTAGCACATTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGc < 6:386856/139‑1 (MQ=255) cacaAAATTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGcc < 4:218567/139‑1 (MQ=255) aatttGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGcc < 2:66890/137‑1 (MQ=255) aatttGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGcc < 4:393931/137‑1 (MQ=255) aatttGTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGcc < 4:57921/137‑1 (MQ=255) gTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATcgccg < 1:358752/124‑1 (MQ=255) gTCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATcgccg > 2:358752/1‑124 (MQ=255) tCTGTGAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACg > 3:251263/1‑139 (MQ=255) ggtgAAGGGGAGCACTTTAAACCATTAGTTTTCGCAAAATCATAAAACGGCGGAAGGCCTGCATAATTTTGCGCGACACAGGAAGCAAAAACCGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc < 2:178434/138‑1 (MQ=255) tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAggcggc < 8:154664/137‑1 (MQ=255) tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAg < 2:177247/132‑1 (MQ=255) tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAg > 1:177247/1‑132 (MQ=255) tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc < 7:422397/137‑1 (MQ=255) tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc < 5:193672/137‑1 (MQ=255) tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc < 2:58681/137‑1 (MQ=255) tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc < 7:264992/137‑1 (MQ=255) tgAAGGGTAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCtg > 7:167841/1‑138 (MQ=255) tgAAGGGTAGCACTTTAAACCATGAGTATTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc < 6:165051/137‑1 (MQ=255) tgAAGGGTAGCAATTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGAAATCGCCGCAGCCTGGCCCAGACGGc < 5:249848/137‑1 (MQ=255) aaGGGGAGCACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCtgg < 7:152736/138‑3 (MQ=255) aGGGTAGCACTTTAAACCTTGAGTTTTCGAAAAATCATAATCCTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGgta < 4:307515/139‑2 (MQ=255) cACTTTAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTaaacg > 3:307515/1‑137 (MQ=255) tAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGTTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGctct > 2:147354/1‑139 (MQ=255) tAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCt < 3:313956/123‑1 (MQ=255) tAAACCATGAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCt > 4:313956/1‑123 (MQ=255) cATGAGTTTTCGCAAAATCAAAATACTGCTGAAGGCCGGCATAATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCAACAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGc < 4:325462/139‑1 (MQ=255) gAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCt < 8:138266/48‑1 (MQ=255) gAGTTTTCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCgg > 4:276871/1‑139 (MQ=255) ttCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc > 5:374901/1‑109 (MQ=255) ttCGCAAAATCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCaa > 3:54180/1‑139 (MQ=255) ttCGCAAAATCATAATACTGCTGAAGGCCTGAATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc < 6:374901/109‑1 (MQ=255) aaaaTCATAATACTGCTGAAGGCCTGCATTATTTTGCGCGACCCAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCGGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTgg < 4:172778/139‑1 (MQ=255) aaaTCATAATACTGCTGATGGCCTGCATTATTTTGCTCGACAACGGAAGCAATAAACGCTTGATAATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGc < 8:167841/139‑1 (MQ=255) aaaTCATAATACTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGTTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGc < 1:147354/139‑1 (MQ=255) atacTGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAgg < 8:137706/139‑1 (MQ=255) ctGCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTtc > 4:399570/2‑139 (MQ=255) gCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTtctc > 1:110133/1‑139 (MQ=255) gCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTtctc > 5:446827/1‑139 (MQ=255) gCTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTtctc > 5:191828/1‑139 (MQ=255) cTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc < 1:380511/89‑1 (MQ=255) cTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGc > 2:380511/1‑89 (MQ=255) cTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCGGGTTCTCg > 7:231121/1‑139 (MQ=255) cTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTtctc < 6:383547/138‑1 (MQ=255) cTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCg > 2:400204/1‑139 (MQ=255) cTGAAGGCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCg > 7:50672/1‑139 (MQ=255) cTGAAGGCCTGCATTATTTTGATCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCACCGACGGCTGGTATTAAACGGCTCTCTCGCCGCCTCAATCTGGCGAATCAGGTtctct > 7:373836/1‑138 (MQ=255) ggCGTGCTTTTTTTTGCTCGAAATATTAATAAATATAGGCTTTATCAGAAAGTGTTGTATTGGCCGCAGCCTGGCCCAGAGGGGTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAg < 8:373836/138‑1 (MQ=255) ggCCTTATTTATTTTGCTCGACACTGTAAGCAAAAAAGGCTTGATCATCATGTGCTCAAAGCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAg < 2:225105/138‑1 (MQ=255) ggCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGtgctgcaa < 2:294794/60‑3 (MQ=255) ggCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGtgctgcaa > 1:294794/1‑58 (MQ=255) ggCCTGCATTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCAATCGCCGCAGCCTGGCCCAGACGGCTGGTATTAAACGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAg > 3:414548/1‑138 (MQ=255) || GCCTTTTTCCAGCAGAGCCTGAAACAGTTCATCGGAAGGGCGGTTAAAATCAATTAACACAAAGTTTGTCTGTGAAGGGTAGCACTTTAAACCATGAGTCTTCGCAAAATCATAATATTGCTGAAGGCCTGTTTTATTTTGCTCGACACAGGAAGCAATAAACGCTTGATCATCAAGTGCTGCGATCGCCGCAGCCTGACCTAGACGGCTCGTGTTAAATGGCTCTCTCGCCGGCTCAATCTGGCGAATCAGGTTCTCGTCAG > CP006881/2188387‑2188649 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |