New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006881	= 449675	102 (1.020)	83 (0.860)	39/240	0.6	51.9%	intergenic (+132/‑1935)	U712_02060/U712_02070	Uncharacterized protein ycnL/Mannitol‑1‑phosphate 5‑dehydrogenase
	?	CP006881	1080118 =	56 (0.580)					intergenic (‑268/‑25)	U712_05315/U712_05320	Uncharacterized protein yhzC/Competence transcription factor

GCTCCTGAAACCAGGAGCCTTTTTATTTTTAAAAAATTGTCACAGTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP006881/449536‑449675 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attttGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAGAAGAAATAGACGGCAAAATCTGTTCCAAAATTATTGAAAA  >  CP006881/1080118‑1080252                                                                                                                                                                                                                                                                                     GCTCCTGAAACCAGGAGCCTTTTTATTTTTAAAAAATTGTCACAGTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTT                                                                                                                                          <  4:319604/139‑1                attCTTTTTATTTTTAAAAAATTGTCACAGTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATG                                                                                                                           >  6:87043/4‑139                 ttCTTTTTATTTTTAAAAAATTGTCACAGTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGG                                                                                                                          <  7:389942/137‑1                   CTTTTTATTTTTAAAAAATTGTCACAGTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGA                                                                                                                         <  1:276028/138‑1                   CTTTTTATTTTTAAAAAATTGTCACAGTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGA                                                                                                                         <  4:408481/138‑1                   CTTTTTATTTTTAAAAAATTGTCACAGTCATGGGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGA                                                                                                                         <  2:236847/138‑1                   CTTTTTAATTTTAAAAAATTGTCACAGTCACGTGCCAAAGTCCACTATACTTTCAATTGTCTAGGGACTGTAAGCGTTTTAACATAGAGGCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAACAAGGAGGGA                                                                                                                         <  4:264278/138‑1                      TTTATTTTTAAAAAATTGTCACAGTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACTTATTTTGCAGAAAAAGGATGGAGGC                                                                                                                      >  5:291407/1‑138                      TTTATTTTTAAAAAATTGTCACAGTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATTGAGGC                                                                                                                      >  5:41057/1‑138                      TTTATTTTTAAAAAATTGTCACAGTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGC                                                                                                                      >  8:219205/1‑138                      TTTATTTTTAAAAAATTGTCACAGTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGC                                                                                                                      <  2:347361/138‑1                      TTTATTTTTAAAAAATTGTCACAGTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAG                                                                                                                        <  2:381405/136‑1                      TTTATTTTTAAAAAATTGTCACAGTCATGTGCCAAAGTCCTCTTTACTTTAAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGC                                                                                                                      >  2:204430/1‑138                        TATTTTTAAAAAATTGTCACAGTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCA                                                                                                                    >  5:161360/1‑138                            TTTAAATAATTGTCACAGTCATGTGCCTAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGCTGGAGGCCATAAT                                                                                                                <  7:447167/138‑1                            TTTAAAAAATTGTCACAGTCATGTGCCTAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGTAAAAGGATGGAGGCCATAAT                                                                                                                <  3:438298/138‑1                                          ACAGTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGTATGGAGGCCATAATATGAGTCAGAAAACA                                                                                                 <  3:321547/139‑1                                          ACAGTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACA                                                                                                 <  3:327918/139‑1                                             GTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGAC                                                                                              >  4:162414/1‑139                                              TCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACG                                                                                             <  6:455085/139‑1                                              TCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACG                                                                                             <  1:147177/139‑1                                                ATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGC                                                                                            <  1:204430/138‑1                                                ATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGC                                                                                            <  3:162414/138‑1                                                        AAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGA                                                                                   <  8:402234/139‑1                                                        AAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGA                                                                                   <  8:257307/139‑1                                                        AAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGA                                                                                   <  7:219205/139‑1                                                        AAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAG                                                                                    >  1:81675/1‑138                                                        AAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACG                                                                                             >  3:86803/1‑129                                                        AAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACG                                                                                             <  4:86803/129‑1                                                        AAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAAAATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGCAAACAGACGCACCTTTAG                                                                                    >  4:367139/1‑138                                                        AAGTCCTCATTACTTTCCATTGTATAGGGACTGTCAGCGTTTTAACATAGAGGCACCGGGAAGCATCATGCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGA                                                                                   <  2:365944/139‑1                                                          GTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCA                                                                                                                    >  1:318933/1‑104                                                          GTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCA                                                                                                                    <  2:318933/104‑1                                                             CTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGT                                                                              <  6:41057/139‑1                                                                TTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTT                                                                                                                                          <  5:351483/76‑1                                                                TTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTT                                                                                                                                          >  6:351483/1‑76                                                                       TCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAACCAGACGCACCTTTAGAATCGTATGAAGTGAA                                                                    >  4:464188/1‑139                                                                        CAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAA                                                                    <  3:131608/138‑1                                                                              TATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGGATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATTATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGC                                                              <  1:163780/138‑1                                                                              TATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGa                                                              >  7:330050/1‑137                                                                                     ACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTG                                                      >  2:464607/1‑139                                                                                     ACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAA                                                                    >  6:219297/1‑125                                                                                     ACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAA                                                                    <  5:219297/125‑1                                                                                     ACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCGTTAGAATCGTATGAAGTGAACGGCGCAACAATTG                                                      >  5:19049/1‑139                                                                                      CTGTAAGCGTTTTAAAATAGAGTCAAAGTGAATCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGATGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGC                                                     <  1:427925/139‑1                                                                                       TGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCC                                                    >  8:12193/1‑139                                                                                        GTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGCCGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCG                                                   >  5:135755/1‑139                                                                                        GTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCG                                                   >  2:103852/1‑139                                                                                        GTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCG                                                   >  2:406245/1‑139                                                                                        GTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCG                                                   >  8:27231/1‑139                                                                                        GTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCG                                                   >  3:137282/1‑139                                                                                        GTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCG                                                   >  5:61123/1‑139                                                                                        GTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGC                                                     >  8:322333/1‑137                                                                                        GTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAA                                                                    >  4:944/1‑122                                                                                        GTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAA                                                                    <  3:944/122‑1                                                                                        GTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGA                                                                                   >  7:212264/1‑107                                                                                        GTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGA                                                                                   <  8:212264/107‑1                                                                                        GTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGC                                                                                            >  4:391200/1‑98                                                                                        GTAAGCGTATTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGC                                                                                            <  3:391200/98‑1                                                                                         TAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCC                                                    <  7:322333/137‑1                                                                                         TAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGC                                                                                            <  8:398585/97‑1                                                                                         TAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGC                                                                                            >  7:398585/1‑97                                                                                           AGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGC                                                <  5:176189/139‑1                                                                                               cttaAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACTTATTTTGCAGAAAAAGGAGGGAGGCCATAATATGTGTCAGAAAACAGACGCACCTTTAGAATCGTAGGAAGTGAACGGCGCAACAATTGCCGTGCTGCC                                            <  4:460853/135‑1                                                                                               TTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGC                                                                                            >  3:106350/1‑91                                                                                               TTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGC                                                                                            <  4:106350/91‑1                                                                                                 TTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTTCAGAAAAAGGATGGAG                                                                                                                        <  8:103423/61‑1                                                                                                 TTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGC                                             >  1:431372/1‑136                                                                                                 TTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGC                                             >  3:474326/1‑136                                                                                                 TTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAG                                                                                                                        >  7:103423/1‑61                                                                                                 TTAACATAGAGTCAAAGGGAAGCAACATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTAATAAAACAGACTCACCTTTAGAATCGTATGAAGTGAACTGCGAAACAATTGCCGTGCTGC                                             >  3:16140/1‑136                                                                                                  TAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAG                                          <  1:406245/138‑1                                                                                                          atTCAAAGGTAAGCATCATTCTCTTAAAATATTTTGCATAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAGAAGAAATAG                                 <  5:42501/137‑1                                                                                                          AGTCACAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAGAAGAAATAG                                 <  7:390158/139‑1                                                                                                          AGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCATCAATTGCCGTGCTGCCAGAAGAAATAG                                 >  8:390158/1‑139                                                                                                          AGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAGCAGCAA                                    >  4:358934/1‑136                                                                                                          AGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAGAAGAAA                                    >  5:300598/1‑136                                                                                                          AGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAA                                                                    >  1:163112/1‑104                                                                                                          AGTCAAAGGGAAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAA                                                                    <  2:163112/104‑1                                                                                                                cGGGAAGCATAAATCTCTGAAAATTTTTTGCAGAAAAAGTATGGAGCACATAATTTTATTCAGAAAACAGACGCACCTTTATAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAGAAGAAATAGACGGCA                           <  4:247424/138‑1                                                                                                                    AAGCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAGAAGAAATAGACGGCAAAAT                       <  5:87043/139‑1                                                                                                                      GCATCATTCTCTGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAGAAGAAATAGACGGCAAAATCT                     >  7:295795/1‑139                                                                                                                                 TGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAAT                                                                                 <  4:133073/68‑1                                                                                                                                 TGAACATATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAAT                                                                                 >  3:133073/1‑68                                                                                                                                    actTATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGATAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGGAACAATTGCCGTGCTGCCAGAAGAAATAGCCGGCAAAATCTGTTCCAAAATTATT       >  6:456543/4‑139                                                                                                                                       TATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAGAAGAAATAGACGGCAAAATCTGTTCCAAAATTATTGAA    <  7:27231/139‑1                                                                                                                                        ATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTA                                                                             >  8:466419/1‑65                                                                                                                                        ATTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTA                                                                             <  7:466419/65‑1                                                                                                                                         TTTTGCAGAAAAAGGATGGATGCCATAATATGTGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAGAAGAAATAGACGGCAAAATCTGTTCCAAAATTATTGAAAA  <  7:298522/139‑1                                                                                                                                         TTTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCTCAACAATTGCCGTGCTGCCAGAAGAAATAGACGGCAAAATCTGTTCCAAAATTATTGAAA   >  4:53249/1‑138                                                                                                                                          TTTGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAGAAGAAATAGACGGCAAAATCTGTTCCAAAATTATTGAta   >  6:25660/1‑135                                                                                                                                                                                                                                                                                     GCTCCTGAAACCAGGAGCCTTTTTATTTTTAAAAAATTGTCACAGTCATGTGCCAAAGTCCTCTTTACTTTCAATTGTATAGGGACTGTAAGCGTTTTAACATAGAGTCAAAGGGAAGCATCATTCTCTGAACATATTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP006881/449536‑449675 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attttGCAGAAAAAGGATGGAGGCCATAATATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAGAAGAAATAGACGGCAAAATCTGTTCCAAAATTATTGAAAA  >  CP006881/1080118‑1080252

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.