| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | pSIJ663_pHT315_araE_xy | = 5551 | 45 (0.010) | 4352 (1.110) | 190/240 | 0.0 | 99.0% | intergenic (+820/–) | ampR/– | –/– |
| ? | pSIJ663_pHT315_araE_xy | 9889 = | NA (NA) | intergenic (+5158/–) | ampR/– | –/– | |||||
Only 100 of 4532 total aligned reads displayed.
AGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGTTATGACACAAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTCGAAACAAACGCATTTGACCAAACAAGCAGA > pSIJ663_pHT315_araE_xy/5413‑5684 | aGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGTTTCTCGTCAGGGGGGCGGACCCAATGGAAAAACGCCAGCAACGCGGCCGTTTTAAGGTTACGTGCCTTTTTCAGGCCGTTTGGGGACATGt > 3:308174/1‑139 (MQ=255) cTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcgg > 7:154781‑M1/1‑135 (MQ=255) cTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcgg < 2:148756‑M1/139‑5 (MQ=255) tGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggc > 6:84201‑M1/1‑134 (MQ=255) tGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGAGTTTTGTGATGCTCGTAAGGGGGGCGGAGCCTAAGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCAGGCCTTTTTCTGGCCTTTTTCTCACATGTgccgc > 8:151316‑M1/1‑134 (MQ=255) tCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcgg < 5:165163‑M1/139‑8 (MQ=255) tCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcgg > 5:370280‑M1/1‑132 (MQ=255) tCGGGTTGCGCCACCTCTGAATTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggc < 8:461264‑M1/137‑6 (MQ=255) ggTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggc < 2:55357‑M1/139‑11 (MQ=255) tttCGCCACCTCTGACTTGAGCGTCGATTTTTTTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggctt > 1:352336‑M1/1‑127 (MQ=255) tCGCCCCCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGGCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCGTTTTACGGGTCCTGGCCGTTTGCTGGCCGTTTGCTCACATGTgcggcggggcgtgg > 7:280338‑M1/1‑125 (MQ=255) tCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCTGGGGGGCGGAGCCTATGTAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttg < 2:428715‑M1/138‑14 (MQ=255) gCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcg > 2:84596‑M1/1‑123 (MQ=255) aacCTCTGACTTGACCGTCGATTTTTGTGATGCGCGTC‑TGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 8:32497‑M1/138‑20 (MQ=255) aCCTCTGACTTGAGGGTCGATTTTTGGGATGCGCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 8:64087‑M1/139‑20 (MQ=255) aCCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 4:192845‑M1/139‑20 (MQ=255) aCCTCTGACTTGAGCGTCGATGTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 7:126446‑M1/139‑20 (MQ=255) gACTTGGGCGTCTTTTTTTGGGATGCTCGTCAGGGGGGCGGAGCATAGGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 5:274605‑M1/139‑26 (MQ=255) aCTTGAGCGTCGATTTTTGTGTTGCGCGTGAGGGGGGGGGAGCCTATGGAAAAACGCCCGCAACGCGGCCTGTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACCTGTtcggcggggcttggcggctgagtgtt > 6:152864‑M1/1‑113 (MQ=255) aCTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 3:46466‑M1/138‑26 (MQ=255) aCTTGAGCGTCGATTTTTGTGATGCTCGGCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 3:435382‑M1/138‑26 (MQ=255) aCTTGAGCGTCGATTTTTGGGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 2:112751‑M1/138‑26 (MQ=255) tgcggcgaTTTTTGTGATGCGCGTGTGGGGGGCGTAGCCTTTGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggc < 6:366677‑M1/137‑31 (MQ=255) aGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggc > 1:80797‑M1/1‑108 (MQ=255) aGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggc < 8:38250‑M1/138‑31 (MQ=255) aGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggc > 8:247715‑M1/1‑108 (MQ=255) aGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt > 3:98833‑M1/1‑108 (MQ=255) gCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggcta < 4:394540‑M1/139‑33 (MQ=255) gTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATaa < 2:300057/139‑1 (MQ=255) gATTTTTGGGATGCTCGGCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgaca < 6:21846‑M1/139‑38 (MQ=255) tttGTGTTGCTCGTCGGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacgg < 3:108331‑M1/138‑41 (MQ=255) tgtgATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggca < 7:318457‑M1/138‑43 (MQ=255) tgtgATGCTCGTCAGGGGGGCGAAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTa < 7:83823/138‑1 (MQ=255) gggCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggctt > 6:24837‑M1/1‑79 (MQ=255) ggCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggctta < 1:431468‑M1/99‑22 (MQ=255) cGGAGCCTATGGAAAAACGCCAGCAACTCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgctgcggggcttggcggct > 7:433708‑M1/1‑76 (MQ=255) cGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccat > 3:68638‑M1/1‑76 (MQ=255) cGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttatggcgccctcggt > 1:236311‑M1/1‑76 (MQ=255) cGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 4:77367‑M1/101‑26 (MQ=255) gAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttt > 1:51733‑M1/1‑74 (MQ=255) gAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggctta > 5:47159‑M1/1‑74 (MQ=255) tATGTAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 6:295727‑M1/139‑71 (MQ=255) aTGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga > 4:349012‑M1/1‑68 (MQ=255) aTGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcgggtttctga > 7:180103‑M1/1‑68 (MQ=255) tGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 1:171337‑M1/137‑71 (MQ=255) tGGAAACACGCCAGACACGCGGCCTTTTTACGGTTCCTGGCCTGATGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattggatggctatgacacggcagtgatttctggcgccatcggttttctgaaa < 2:334171‑M1/139‑73 (MQ=255) tGGAAAAACGCCAGCATCGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 3:340370‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTTGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 1:294792‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 6:189240‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 6:430718‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 5:105092‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 3:242765‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 1:270409‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 3:372146‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 4:131989‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttatgt > 5:43630‑M1/1‑67 (MQ=255) gAAAACCGCCAGCAACGCGGCCTTCTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaaga < 5:23587‑M1/139‑75 (MQ=255) gAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaaga < 7:217710‑M1/139‑75 (MQ=255) aaCGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagattta > 3:158770‑M1/1‑61 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata < 7:398464‑M1/139‑81 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata < 3:135364‑M1/139‑81 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata > 6:398556‑M1/1‑59 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcgtggcggcttattgtatggctaggacacggcagtgatttctggcgccatcggttttctgaaagatttata < 6:470829‑M1/139‑81 (MQ=255) ccAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 7:241510‑M1/76‑20 (MQ=255) aGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 8:283942‑M1/80‑26 (MQ=255) gCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 2:272698‑M1/124‑71 (MQ=255) cgcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 3:182301‑M1/139‑90 (MQ=255) cgcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 4:158770‑M1/139‑90 (MQ=255) cgcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 8:186228‑M1/139‑90 (MQ=255) cgcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 4:424536‑M1/139‑90 (MQ=255) cgcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 2:189843‑M1/139‑90 (MQ=255) cgcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 3:284044‑M1/120‑71 (MQ=255) cgcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttcaggcgccatcggttttctgaaagatttatacagcctgag < 5:8208‑M1/139‑90 (MQ=255) cgcgGCCGTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 6:115786‑M1/139‑90 (MQ=255) gcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagt < 1:320741‑M1/139‑91 (MQ=255) gCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggtgtgctgaaagatttataaagcctgagtccg > 8:114396‑M1/1‑46 (MQ=255) gCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgaca < 3:216823‑M1/83‑38 (MQ=255) aCGGTTCCTGGGCTTTTGCTGGCCGTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatgg < 4:463957‑M1/138‑101 (MQ=255) cGGTTCCTGGCCTTTTGCTGTCCTTTTGCTCACATGTgcgggggggcttggcgtcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatactgcctgagtccgtttttgga < 7:35865‑M1/138‑102 (MQ=255) cGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatgggtatgacacggcagtgatttctggcgccatcggttttctgaaagattaatacagcctgagtccgtttatggag > 5:191500‑M1/1‑37 (MQ=255) cGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatgga < 1:208894‑M1/138‑102 (MQ=255) cGGTTCCTGGCCTTTTGCTGGCCTTTAGCTCACATGTgcggcggggcttggcggcttattgtatggctttgacacggctgtgatttctggcgccatctgttttctgaaagatttatacagcctgagtccgtttatgga < 5:212951‑M1/138‑102 (MQ=255) gTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagg > 5:130984‑M1/1‑35 (MQ=255) tggccttttgctggccttttgcTCACATGTgcggcggggcttggcggcgtattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttg > 4:219477‑M1/1‑30 (MQ=255) tttgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatga > 4:310670‑M1/1‑24 (MQ=255) ttgctggccttttgctCACATGTgcggcggggcttggcggct < 7:50005‑M1/42‑20 (MQ=255) tgctggccttttgctCACATGTgcggcggggcttggcggcttattgtctggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttc < 5:40433‑M1/138‑117 (MQ=255) tgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttc < 1:100918‑M1/138‑117 (MQ=255) gccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata > 8:359115‑M1/1‑17 (MQ=255) ccttttgctCACATGTgcggcggggcttggcggctttttgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcatt < 5:313813‑M1/139‑124 (MQ=255) ccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcatt < 2:389127‑M1/139‑124 (MQ=255) ccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcatt < 4:266719‑M1/139‑124 (MQ=255) ttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattat < 1:395543‑M1/137‑126 (MQ=255) gctCCCATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgat < 3:407321‑M1/138‑129 (MQ=255) gctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgat < 2:241905‑M1/138‑129 (MQ=255) gctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgat < 8:218822‑M1/138‑129 (MQ=255) acaTGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgattggag < 6:332962‑M1/139‑134 (MQ=255) acaTGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgattggag < 8:421321‑M1/139‑134 (MQ=255) acaTGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttc < 5:341077‑M1/122‑117 (MQ=255) aTGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 1:136195‑M1/74‑71 (MQ=255) | AGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGTTATGACACAAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTCGAAACAAACGCATTTGACCAAACAAGCAGA > pSIJ663_pHT315_araE_xy/5413‑5684 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |