Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	1,803,627	G→T	pseudogene (6260/16546 nt)	U712_09020 →	frameshift (+1) in homopolymer run at nucleotide position 6839 in gene

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	1,803,627	0	G	T	100.0%	272.4 / NA	80	pseudogene (6260/16546 nt)	U712_09020	frameshift (+1) in homopolymer run at nucleotide position 6839 in gene
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (44/36);  total (44/36)

AGCTGCAAAAAAATATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGGGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAGCAATTGTTTTCAGGGTTGACAG  >  CP006881/1803496‑1803761                                                                                                                                    |                                                                                                                                       aGCTGCAAAAAAATATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGt                                                                                                                                    <  3:80923/136‑1 (MQ=255) aGCTGCAAAAAAATATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGt                                                                                                                                    >  4:80923/1‑136 (MQ=255) aGCTGCAAAAAAATATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTc                                                                                                                                 >  4:289947/1‑139 (MQ=255) aGCTGCAAAAAAATATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTc                                                                                                                                 >  3:151406/1‑139 (MQ=255) aGCTGCAAAAAAATATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTc                                                                                                                                 >  3:362017/1‑139 (MQ=255) aGCTGCAAAAAAATATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTc                                                                                                                                 >  7:128224/1‑139 (MQ=255) aGCTGCAAAAAAATATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTc                                                                                                                                 >  1:288144/1‑139 (MQ=255)  gCTGCAAAAAAATATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTc                                                                                                                                 <  3:148777/138‑1 (MQ=255)  gCTGCAAAAAAATATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTc                                                                                                                                 <  3:306639/138‑1 (MQ=255)  gCTGCAAAAAAATATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTc                                                                                                                                 <  1:375331/138‑1 (MQ=255)  gCTGCAAAAAAATATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTc                                                                                                                                 <  4:362017/138‑1 (MQ=255)      cAAAAAAATATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTc                                                                                                                            >  8:457840/1‑139 (MQ=255)        aaaaaaTATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCt                                                                                                                           >  8:312290/1‑138 (MQ=255)         aaaaaTATGCAGAGCATCTCGTATTCCTATGTTAATAAGATCATGACACGAGAAATCAAAATGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGCAGCAATGCCTTCTTCAGTAGATGTGCGTTTCCATTCTta                                                                                                                         <  6:131142/139‑1 (MQ=255)           aaaTATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTtata                                                                                                                       <  2:201569/139‑1 (MQ=255)           aaaTATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTtata                                                                                                                       <  4:394612/139‑1 (MQ=255)           aaaTATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTtata                                                                                                                       <  6:319307/139‑1 (MQ=255)                tGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTc                                                                                                                                 <  4:290992/124‑1 (MQ=255)                tGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTc                                                                                                                                 >  3:290992/1‑124 (MQ=255)                     agCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAgt                                                                                                             >  5:168170/1‑139 (MQ=255)                          ctcGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGttt                                                                                                         >  6:26832/1‑138 (MQ=255)                             gtaatacTATGTTAATATGATCATGAGAAGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTCTACATCCTGGAAGCAAGGCCTTCTTCAGTAGATTTGCGTTTACATTCTTATACAGAACAAGTTTTTaaaa                                                                                                     <  8:188387/133‑1 (MQ=255)                             gTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTaaaa                                                                                                     <  4:282946/139‑1 (MQ=255)                             gTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTaaaa                                                                                                     <  2:307084/139‑1 (MQ=255)                             gTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTaa                                                                                                       <  6:168170/137‑1 (MQ=255)                               aTTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAg                                                                                                   >  3:140874/1‑139 (MQ=255)                                     aTGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTAc                                                                                               >  2:359673/1‑137 (MQ=255)                                       gtgAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACaa                                                                                             >  1:273794/1‑137 (MQ=255)                                        tgAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACaa                                                                                             >  3:466496/1‑136 (MQ=255)                                          aaTATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACaa                                                                                             >  2:260892/1‑134 (MQ=255)                                          aaTATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACaa                                                                                             >  6:168696/1‑134 (MQ=255)                                                aTCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGAATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCg                                                                                  >  3:399994/1‑139 (MQ=255)                                                   aTGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTAc                                                                               <  5:26832/139‑1 (MQ=255)                                                    tGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTAc                                                                               >  2:321186/1‑138 (MQ=255)                                                      agaCGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGa                                                                             <  5:168696/138‑1 (MQ=255)                                                      agaCGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGa                                                                             <  1:260892/138‑1 (MQ=255)                                                                  aacttGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACgg                                                                <  8:86024/136‑1 (MQ=255)                                                                       gacccagcCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGGGTTTAAAACGGTACAAGAGATCATCCGTACGAAACCGAAAGACGGCAtt                                                            <  4:58834/134‑1 (MQ=255)                                                                            agcCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGtt                                                      <  4:151406/139‑1 (MQ=255)                                                                             gcaaTCGAGTATGTCAATGTATACAGCCTGTAAGCAAGGACTTCTTCAGTAGATTTTCGTTTCAATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAAACGAAAGACGGCATTCTCGTTc                                                     <  6:261717/136‑1 (MQ=255)                                                                             gcCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGtt                                                      >  1:209793/1‑138 (MQ=255)                                                                                        tGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCa                                                                                                                               <  7:339022/54‑1 (MQ=255)                                                                                        tGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCa                                                                                                                               >  8:339022/1‑54 (MQ=255)                                                                                        tGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTTAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGAcc                                          >  8:123632/1‑139 (MQ=255)                                                                                        tGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGAcc                                          >  2:428225/1‑139 (MQ=255)                                                                                         gTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTATTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGAcc                                          <  1:428225/138‑1 (MQ=255)                                                                                          tCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACctc                                        >  5:333594/1‑139 (MQ=255)                                                                                              tGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGAcc                                          >  7:418657/1‑133 (MQ=255)                                                                                              tGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGAcc                                          <  8:418657/133‑1 (MQ=255)                                                                                                    cAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAgg                                >  1:83296/1‑137 (MQ=255)                                                                                                     aGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAgg                                >  8:347838/1‑136 (MQ=255)                                                                                                     aGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGgag                             <  5:187002/139‑1 (MQ=255)                                                                                                     aGCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCAATCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGgag                             <  1:40439/139‑1 (MQ=255)                                                                                                      gCCTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGgag                             >  8:384272/1‑138 (MQ=255)                                                                                                       ccTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGaa                           >  3:146967/1‑139 (MQ=255)                                                                                                       ccTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGaa                           >  8:267426/1‑139 (MQ=255)                                                                                                       ccTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGaa                           >  1:87961/1‑139 (MQ=255)                                                                                                       ccTGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGaa                           <  7:312290/139‑1 (MQ=255)                                                                                                         tGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGaa                           >  3:424431/1‑137 (MQ=255)                                                                                                         tGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGaa                           >  1:56576/1‑137 (MQ=255)                                                                                                         tGGAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGaa                           >  7:267476/1‑137 (MQ=255)                                                                                                          ggAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAg                        >  8:65924/1‑139 (MQ=255)                                                                                                          ggAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAg                        >  3:459314/1‑139 (MQ=255)                                                                                                          ggAAGCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAg                        >  8:308502/1‑139 (MQ=255)                                                                                                              gCAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAGCAAt                    <  3:289947/139‑1 (MQ=255)                                                                                                               cAAGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAGCAAtt                   >  6:195922/1‑139 (MQ=255)                                                                                                                 aGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACTAGAGATCATTCGTACGAAACCGAAAGACGGCAGTCTCGTTCAGAGCGTGACCTCTGCGGCGGGAGAACCGCCATTGt                 >  8:455365/1‑139 (MQ=255)                                                                                                                 aGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCAt                                                                                     <  4:26977/71‑1 (MQ=255)                                                                                                                 aGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCAt                                                                                     >  3:26977/1‑71 (MQ=255)                                                                                                                 aGGCCTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAGCAATTGt                 >  3:170816/1‑139 (MQ=255)                                                                                                                    ccTTCTTCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAGCAATTGtttt              <  4:424431/139‑1 (MQ=255)                                                                                                                     cttcttCAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAGCAATTGtttt              >  6:444833/1‑138 (MQ=255)                                                                                                                      ttcttcGTTAGATGTGGGTTTCCATTCTTATACAGAACAAGTGTTTAAAAATGTACAAGAGATCTTTCGTACTAAACGGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAGCAATTGTTTTCa            <  2:231176/139‑1 (MQ=255)                                                                                                                         ttcAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAGCAATTGTTTTCAggt         >  2:308170/1‑138 (MQ=255)                                                                                                                           cAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAGCAATTGTTTTCAgg          <  8:336526/136‑1 (MQ=255)                                                                                                                           cAGTAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAGCAATTGTTTTCAgg          <  3:66310/136‑1 (MQ=255)                                                                                                                              tAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAGCAATTGTTTTCAgg          >  8:320519/1‑133 (MQ=255)                                                                                                                              tAGATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAGCAATTGTTTTCAgg          <  7:320519/133‑1 (MQ=255)                                                                                                                                gATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAGCAATTGTTTTCAGGGTTGACAg  <  2:288144/139‑1 (MQ=255)                                                                                                                                gATGTGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAGCAATTGTTTTCAGGGTTGACAg  <  8:128224/139‑1 (MQ=255)                                                                                                                                    |                                                                                                                                       AGCTGCAAAAAAATATGCAGAGCATCTCGTATTCCTATGTGAATATGATCATGAGACGAGAAAACAAATTGAAGCAGCCATCGAGGATGTCCATGTATACAGCCTGGAAGCAAGGCCTTCTTCAGTAGATGGGCGTTTCCATTCTTATACAGAACAAGTGTTTAAAAAGGTACAAGAGATCATTCGTACGAAACCGAAAGACGGCATTCTCGTTCAGATCGTGACCTCTGCCGAGGGAGAACAGCAATTGTTTTCAGGGTTGACAG  >  CP006881/1803496‑1803761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑