BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	3,723,091	A→T	intergenic (‑205/‑96)	U712_19190 ← / → U712_19195	PTS system sucrose‑specific EIIBC component/putative transporter ywcJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	3,723,091	0	A	T	100.0%	423.4 / NA	122	intergenic (‑205/‑96)	U712_19190/U712_19195	PTS system sucrose‑specific EIIBC component/putative transporter ywcJ
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (36/86); total (36/86)

Only 100 of 122 total aligned reads displayed.

TTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAACT‑G‑T‑TTTTTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCAAAGAAAGCAGGAAAAAACAATGGAAACTCAAGCATTGCAAAAAGTTGAACAGT  >  CP006881/3722959‑3723220

tttCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAAcat                                                                                                                              >  7:275757/1‑137 (MQ=255)

       tACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGAc                                                                                                                        >  4:199397/1‑138 (MQ=255)

                  tAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTa                                                                                                             <  6:239545/138‑1 (MQ=255)

                        ttGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaaaatt                                                                                                       >  8:312484/1‑136 (MQ=255)

                          gCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaat                                                                                                    >  8:466003/1‑137 (MQ=255)

                          gCCTGCTTTACCAGTCACAATCCCGCTTAATCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaa                                                                                                     <  1:63550/138‑2 (MQ=255)

                          gCCGGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCGTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaa                                                                                                     <  2:142170/138‑2 (MQ=255)

                               cTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATTTAACATGTAGACAAAAATTCGTAAAAATTAATtgtg                                                                                                >  1:176748/1‑138 (MQ=255)

                               cTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATtgtg                                                                                                <  1:247296/138‑1 (MQ=255)

                               cTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATtgtg                                                                                                >  7:465167/1‑138 (MQ=255)

                                tttACCAGTCACAATCCCGCTTATTCAGATTAAGAATACTCTTTCATCATAAATAATGATATCGTTTTAGTCAAATAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTATACAAAAATTTGTAAAAATTAATTTTGa                                                                                               >  4:294094/1‑138 (MQ=255)

                                  tACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaa                                                                                             <  4:166112/138‑1 (MQ=255)

                                  tACCAGTCACAATCCCGCCTATTCAGATTAAGAATACCCTTTCATCATAAATCATGATAGCGTTTTCGGCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaa                                                                                             <  6:239763/138‑1 (MQ=255)

                                    ccAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATAc                                                                                          >  3:339530/1‑139 (MQ=255)

                                    ccAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATAc                                                                                          >  2:92014/1‑139 (MQ=255)

                                     cacgcacaCTCCCGCACAATCAGCTTACGAATACGCCTTCATCATACATCATGATAGCGTTTTCGTCAACT‑A‑TATTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACt                                                                                         <  4:419927/135‑1 (MQ=255)

                                     cAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACt                                                                                         <  8:108911/139‑1 (MQ=255)

                                        tCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                      <  2:52105/139‑1 (MQ=255)

                                        tCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                      <  1:380628/139‑1 (MQ=255)

                                        tCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                      <  8:40135/139‑1 (MQ=255)

                                         cacaATCCCGCTTATTCAGTTTATGTATACTCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTATTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTTATTGTGAAATACTTca                                                                                      <  2:10639/138‑1 (MQ=255)

                                         cacaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                      >  6:300201/1‑138 (MQ=255)

                                         cacaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                      >  1:183205/1‑138 (MQ=255)

                                          acaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTATGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTcaca                                                                                    <  4:445046/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAACTCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  7:273644/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  2:456182/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  6:34870/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  4:398872/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  4:307809/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  8:465167/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  4:30529/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  6:224962/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  7:31116/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  3:466391/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  8:362619/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  7:163307/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  5:230821/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  8:328494/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAACTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  7:67386/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGAGTTTTCGTCAACTAT‑T‑TTTTTAGTTTAATAGTTTGATATATCATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  4:191413/139‑1 (MQ=255)

                                             aTCCCGCGTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  2:331745/139‑1 (MQ=255)

                                             aTCCCGCATATTCAGATTAAGAATACGCCTTCATCATAAATCATGATAGCGATTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  3:341440/139‑1 (MQ=255)

                                             aTCCAGATTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  4:312918/139‑1 (MQ=255)

                                                ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                               <  5:300201/138‑1 (MQ=255)

                                                ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                               <  5:100027/138‑1 (MQ=255)

                                                ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                               <  6:241535/138‑1 (MQ=255)

                                                ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                               <  4:54063/138‑1 (MQ=255)

                                                ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCg                                                                              <  7:37824/139‑1 (MQ=255)

                                                ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCg                                                                              <  2:134767/139‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACTCTTTAATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTAGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            <  3:294094/139‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            <  5:59921/139‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            <  5:272470/139‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            <  2:151824/139‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            <  1:158238/139‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            <  7:183958/139‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            <  3:124169/139‑1 (MQ=255)

                                                  gCTTAATCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            <  7:252328/139‑1 (MQ=255)

                                                   cTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                      <  6:41401/128‑1 (MQ=255)

                                                   cTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                      >  7:235185/1‑128 (MQ=255)

                                                   cTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                      <  8:235185/128‑1 (MQ=255)

                                                    ttATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            <  8:364037/137‑1 (MQ=255)

                                                      aTTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGc                                                                           >  2:75171/1‑136 (MQ=255)

                                                      aTTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGc                                                                           <  1:75171/136‑1 (MQ=255)

                                                      aTTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCt                                                                          <  5:10363/137‑1 (MQ=255)

                                                          aGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACt                                                                     <  2:10093/138‑1 (MQ=255)

                                                            aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAATTACTTCACAATATCGTGCTAGACTATg                                                                  >  2:192738/1‑139 (MQ=255)

                                                            aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                      >  1:254988/1‑119 (MQ=255)

                                                            aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                      >  3:401405/1‑119 (MQ=255)

                                                            aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                      <  2:254988/119‑1 (MQ=255)

                                                            aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                      <  4:401405/119‑1 (MQ=255)

                                                            aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 >  1:247313/1‑124 (MQ=255)

                                                            aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            >  8:432738/1‑129 (MQ=255)

                                                            aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            <  7:432738/129‑1 (MQ=255)

                                                                agaATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAATATTAATTGTGAATTACTTCACAATATCGTGCTATACTATGCTc                                                               >  7:125905/1‑138 (MQ=255)

                                                                  aaTACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            <  1:135238/123‑1 (MQ=255)

                                                                  aaTACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            <  7:429802/123‑1 (MQ=255)

                                                                  aaTACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            >  2:135238/1‑123 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 >  3:5412/1‑114 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  4:5412/114‑1 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCtata                                                                       <  5:42439/124‑1 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCt                                                                          <  4:28314/121‑1 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCt                                                                          >  3:28314/1‑121 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                         >  6:244942/1‑138 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                         >  3:446654/1‑138 (MQ=255)

                                                                          ttCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 >  7:20996/1‑110 (MQ=255)

                                                                          ttCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                 <  8:20996/110‑1 (MQ=255)

                                                                            catcatAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGAC‑AAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGaaaga                                                   >  8:454376/1‑137 (MQ=255)

                                                                              tcatACATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTATTTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGaaagaaag                                                <  6:100925/139‑1 (MQ=255)

                                                                              tcatAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGaaagaaag                                                <  1:147675/139‑1 (MQ=255)

                                                                                       aTGATAGCGTTTTCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGAAGGaa                                          >  1:321503/1‑136 (MQ=255)

                                                                                                ttttCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            >  6:232634/1‑93 (MQ=255)

                                                                                                ttttCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                            <  5:232634/93‑1 (MQ=255)

                                                                                                ttttCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCtata                                                                       <  4:407281/98‑1 (MQ=255)

                                                                                                ttttCGTCAACTAT‑T‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCtata                                                                       >  3:407281/1‑98 (MQ=255)

                                                                                                     gTCAACT‑ATT‑TTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCa                         <  4:217222/139‑1 (MQ=255)

                                                                                                         aactatt‑tttttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTAGTAAAAATTAATTTTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAg                       >  2:394117/7‑138 (MQ=255)

                                                                                                                       gTTAAATAGTTTTATATAACATGTAGAAAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGtt         <  5:99875/139‑1 (MQ=255)

                                                                                                                       gTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGtt         <  7:356477/139‑1 (MQ=255)

                                                                                                                               gTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGt  <  5:244942/138‑1 (MQ=255)

                                                                                                                               gTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGt  <  3:100538/138‑1 (MQ=255)

TTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAACT‑G‑T‑TTTTTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCAAAGAAAGCAGGAAAAAACAATGGAAACTCAAGCATTGCAAAAAGTTGAACAGT  >  CP006881/3722959‑3723220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`