| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 1,653,712 | G→A | A186T (GCA→ACA) | U712_08495 → | GTP‑sensing transcriptional pleiotropic repressor CodY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,653,712 | 0 | G | A | 96.2% | 252.4 / 0.6 | 78 | A186T (GCA→ACA) | U712_08495 | GTP‑sensing transcriptional pleiotropic repressor CodY |
| Reads supporting (aligned to +/- strand): ref base G (1/2); new base A (32/43); total (33/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01 | |||||||||||
ATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAGCAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGGTGTTATC > CP006881/1653577‑1653846 | aTTCTAGCTGTATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACaa < 8:369599/139‑1 (MQ=255) gCTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAg > 1:220290/1‑138 (MQ=255) gCTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAg > 8:452804/1‑138 (MQ=255) cTGAATCCGGCGCCACAGTTGGAGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAAATGAAGCGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTCAGCTTGAAACAACTGAGca < 6:105318/139‑1 (MQ=255) cTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTTGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGca < 7:447005/139‑1 (MQ=255) cTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGca < 6:73507/139‑1 (MQ=255) cTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGca < 3:8818/139‑1 (MQ=255) cTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGca < 5:1416/139‑1 (MQ=255) cTGAATACGGCGCAACAGTTGTAGGAATGTAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAATCAAGAAGCAAAGCTGTAGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGca < 8:335968/139‑1 (MQ=255) ggCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTg < 6:331796/139‑1 (MQ=255) ggCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTg < 4:271314/139‑1 (MQ=255) gcgcAACAGTTGTCGGAAAGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACAttttt > 1:36932/1‑137 (MQ=255) cgcAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTgag > 6:361906/1‑139 (MQ=255) cgcAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTgag > 8:231743/1‑139 (MQ=255) cgcAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTgag > 8:379540/1‑139 (MQ=255) aaCAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTgaggag < 6:226612/139‑1 (MQ=255) ttGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGa > 8:104764/1‑139 (MQ=255) ttGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCGTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGa > 2:337503/1‑139 (MQ=255) gTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACg > 1:313093/1‑139 (MQ=255) gTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACg > 7:370000/1‑139 (MQ=255) aTGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAAt > 2:333385/1‑138 (MQ=255) ttgAAAACCGAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGa < 2:151943/137‑1 (MQ=255) tGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGa < 3:210492/139‑1 (MQ=255) ggAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATg > 6:200057/1‑137 (MQ=255) aaaGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGc > 1:163265/1‑137 (MQ=255) aaaGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGc > 5:67644/1‑137 (MQ=255) gCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTa < 6:383848/139‑1 (MQ=255) aTTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCt > 6:196422/1‑138 (MQ=255) ttGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGa < 4:116644/139‑1 (MQ=255) tGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAGCAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGAc > 8:441840/1‑139 (MQ=255) gagGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCgtg < 7:104764/139‑1 (MQ=255) agcaagaagcaaAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGca > 2:61785/1‑72 (MQ=255) agcaagaagcaaAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGca < 1:61785/72‑1 (MQ=255) aagaagcaaAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCAt > 7:216082/1‑138 (MQ=255) gaagcaaAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTAc < 5:361906/139‑1 (MQ=255) gaagcaaAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTAc < 8:170055/139‑1 (MQ=255) gcaaAGCTGTCGTACAAATGGCTATCAGCTGGGTTTCTTACATGTAGCTTGTAGCAATTGAGCACATTTTTGAGGAGCTTGTCGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTAccag < 2:156031/139‑3 (MQ=255) gcaaAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCg < 1:299769/139‑1 (MQ=255) gcaaAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCg < 1:25293/139‑1 (MQ=255) aaaGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGtt < 4:28543/139‑1 (MQ=255) aaaGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGtt < 5:196422/139‑1 (MQ=255) aaaGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGtt < 1:202579/139‑1 (MQ=255) aaaGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGGCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGtt < 4:122307/139‑1 (MQ=255) gCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTg > 8:182197/1‑139 (MQ=255) tCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTAc < 8:71097/127‑1 (MQ=255) tCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTAc > 7:71097/1‑127 (MQ=255) tCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTAt > 5:404222/1‑139 (MQ=255) tCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTAt > 6:42382/1‑139 (MQ=255) aaaTGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGaa < 5:42382/139‑1 (MQ=255) aaaTGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGaa < 1:333385/139‑1 (MQ=255) aTGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACg < 7:452804/139‑1 (MQ=255) ggCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCa > 3:184854/1‑139 (MQ=255) gCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCa < 7:231743/138‑1 (MQ=255) tATCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACt > 5:312702/1‑138 (MQ=255) tCAGCTCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACt > 2:14496/1‑136 (MQ=255) tCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGAc < 1:448463/54‑1 (MQ=255) tCGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGAc > 2:448463/1‑54 (MQ=255) cGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCgtg < 2:429500/96‑1 (MQ=255) cGCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCgtg > 1:429500/1‑96 (MQ=255) gCTTTCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACTCAGAAAGCTg > 5:279837/1‑139 (MQ=255) ttattACAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACTCAGAAAGCTGga < 1:238818/135‑1 (MQ=255) tCTTACAGTGAGCTTGAAACAATTGAGCACATTTTTGCGGAGCTTCACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGGGTCGGCATTACCCGTTCTGTAATTGTCAACGCACTCAGAAAGCTGga < 2:36932/137‑1 (MQ=255) aCAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACAGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAgcgc < 6:340695/139‑1 (MQ=255) ccttGAGCTTTAAACAATTCACCACATTTTTGAGGAGCTTGACGGAATTGATGGTCTTCTTGTTGCAAGTAAAATTGGTGACCGTGTCGGCTTTACCCGTTCTGTTTTTGTGAACGCACTCAGAACTCTGGAGAgcgc < 6:67644/135‑1 (MQ=255) cAGTGATCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAgcgc < 7:58826/138‑1 (MQ=255) cAGTGAGCTTGAAGCAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAgcgc < 7:441840/138‑1 (MQ=255) cAGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAgcgc < 2:163265/138‑1 (MQ=255) aGTGAGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCg < 1:14496/139‑1 (MQ=255) aGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAg < 8:117167/64‑1 (MQ=255) aGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAg > 7:117167/1‑64 (MQ=255) aGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGgtgt > 1:221657/1‑139 (MQ=255) aGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGgtgt > 5:8738/1‑139 (MQ=255) aGCTTGAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTATGTTATtg < 8:6394/105‑1 (MQ=255) aGCTTGAAACAATTGAGCACATTTTTGAGGAGCTGGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGgtgt > 3:425477/1‑139 (MQ=255) aGCTTGAAACAATTGAGCACATTTTTGAGGAGATTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATtg > 7:6394/1‑105 (MQ=255) gAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGGTGTTAt < 2:221657/137‑1 (MQ=255) gAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGGTGTTATc < 7:379540/138‑1 (MQ=255) gAAACAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGGTGTTATc < 5:82071/138‑1 (MQ=255) | ATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAGCAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGGTGTTATC > CP006881/1653577‑1653846 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |