Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	3,725,239	2 bp→AA	intergenic (‑71/‑457)	U712_19205 ← / → U712_19210	Uncharacterized protein ywcI/Minor extracellular protease vpr

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	3,725,239	0	G	A	98.4%	194.7 / NA	61	intergenic (‑71/‑458)	U712_19205/U712_19210	Uncharacterized protein ywcI/Minor extracellular protease vpr
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (33/27);  minor base C (1/0);  total (34/27)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	CP006881	3,725,240	0	G	A	100.0%	171.9 / NA	61	intergenic (‑72/‑457)	U712_19205/U712_19210	Uncharacterized protein ywcI/Minor extracellular protease vpr
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (34/27);  total (34/27)

AGACCATCCACACCCGTAAAGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑C‑T‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCAC‑GGGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTTTTTAGAAG  >  CP006881/3725129‑3725366                                                                                                                         ||                                                                                                                                aGACCTTCCACACCCGTAAAGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCg                                                                                                      >  7:436381/1‑139 (MQ=255)     cATCCACACCCGTAAAGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCaaa                                                                                                  >  4:297497/1‑139 (MQ=255)      aTCCACACCCGTAAAGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCaaa                                                                                                  >  2:277125/1‑138 (MQ=255)             cccGTAAAGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGc                                                                                          >  3:468425/1‑139 (MQ=255)             cccGTAAAGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACAAGCGGc                                                                                          >  7:108837/1‑139 (MQ=255)             cccGTAAAGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTATTTTCTCGCAAACTAGCGGc                                                                                          >  5:157472/1‑139 (MQ=255)              ccGTAAAGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGct                                                                                         >  8:90148/1‑139 (MQ=255)                gTAAAGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGctc                                                                                        >  7:204069/1‑138 (MQ=255)                 tAAAGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTGTTTTTGGCAGGCAGCGT‑T‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑CGCCCGC‑AAGAAAA‑GACGGCCGATTTAGTTTATGGGAAACAAGCGGctcag                                                                                      >  1:115962/1‑137 (MQ=255)                 tAAAGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCATTTGTCGCAAACAAGCGGctc                                                                                        >  8:310532/1‑137 (MQ=255)                 tAAAGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGAGTTCTTTTATCGCCAACTATCGGCGCTa                                                                                      >  8:212829/1‑139 (MQ=255)                 tAAAGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCCATTTGTTTTCTCGCAAACTAGCGGcgc                                                                                        >  3:304850/1‑135 (MQ=255)                 tAAAGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTCGCAGGCAGA‑C‑TGTT‑T‑A‑GCAGCCC‑GTTTTCTCAGACGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTAGCAAACAAGCGGctct                                                                                       >  6:207767/1‑138 (MQ=255)                  aaaGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GCCGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAg                                                                                     >  6:316342/1‑139 (MQ=255)                    ataTACAAGCAAACCTTTC‑ATAGAAAAACATCCCTCCGATTCTTTTTGGCTGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AATAAAC‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCa                                                                                   <  5:448267/137‑1 (MQ=255)                    acaaacacGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCCGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCCGCCGC‑CCCCCCC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCa                                                                                   <  3:299082/135‑1 (MQ=255)                    aGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGGTTCTTTTTGGCAGGCTGC‑CTT‑TT‑T‑A‑GCCGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AACAAAA‑CACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCa                                                                                   <  6:394465/139‑1 (MQ=255)                      aTACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑CGCCCGC‑AAGAATA‑GACGGCCGATTTCTTTTGGCGCACACTAGCGGCTGTAGcgga                                                                                 >  4:403932/1‑136 (MQ=255)                      aTACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTGGAGCat                                                                                  >  8:435670/1‑137 (MQ=255)                        aCAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCCGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AATAAAA‑GACGGCCGATTTCTTTTATAGCGAGCTAGCGGCACTAGCAAAAc                                                                               >  5:282469/1‑139 (MQ=255)                        aCAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GCCGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCaaaa                                                                                >  3:78435/1‑138 (MQ=255)                        aCAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAAc                                                                               >  3:194929/1‑139 (MQ=255)                        aCAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTATCGCAAACTAGCGGCGCTAGCaaaa                                                                                >  1:252415/1‑138 (MQ=255)                        aCAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGAGTTCTTTTCTCGCAAACTAACCGAGCGAGCaaaa                                                                                >  6:322333/1‑138 (MQ=255)                        aCAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGAATTCTTTTCTCGCAAACTAGCGGCTCTAGCAAGAc                                                                               >  1:28974/1‑139 (MQ=255)                          aaGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCCGCCC‑GTTTTATCAGCCGC‑AGCCCGC‑CAGCAAA‑GACCGACGATTTGTTTTCTCGCAACAGAGCCGCACGAGCaaatca                                                                              >  6:125096/1‑135 (MQ=255)                          aaGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GCCGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACt                                                                              >  3:234549/1‑138 (MQ=255)                          aaGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACt                                                                              >  6:181091/1‑138 (MQ=255)                            gaaaaCGTTTA‑AAACAAAAACACCCCTCCCTTTCTTTGTGGCAGGCAGC‑C‑T‑TTAT‑C‑GCCGCCC‑GTTTTCACACCCGC‑CCCCCTC‑AATAAAC‑CACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCAt                                                                           <  5:392698/137‑1 (MQ=255)                            gCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCCGCCC‑GTTTTCTCCGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGAGTTCTTTTCTCGCCAACGAGAGGCTCTAGCAATACTCAt                                                                           >  5:258715/1‑139 (MQ=255)                            gCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTATTTTTGGCAGGCAGC‑CTT‑TT‑T‑C‑GCAGCCC‑GTTTTCTCAGCCGC‑ACCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCAt                                                                           <  3:229271/139‑1 (MQ=255)                            ccAACCGTTTA‑ATACAAAACCATCCCTCCGCTGCTTTTTGCCCGGCCGC‑CTT‑TT‑T‑C‑CCCGCCC‑TTTTTCTCCCCCCC‑CGCCCCC‑AAGAAAC‑CACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCAt                                                                           <  1:8688/138‑1 (MQ=255)                            ccAAACTTTCC‑ATACAAAAACACCCCTCCGCTTCTTTTTGGCCGGCCGC‑CTT‑TT‑T‑C‑GCCGCCC‑GTTTCCTCACCCGC‑CGCCCGA‑AACAAAC‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCAt                                                                           <  7:90094/138‑1 (MQ=255)                            ccAAACGTTTA‑AAAAAAAAACATCCCTCCGCTGATTTTTGGCAGGCAGC‑CTT‑TT‑T‑C‑GCCGCCC‑GTTTTCTCCGCCGC‑CGCCCGA‑AATAAAA‑CACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCAt                                                                           <  8:4353/138‑1 (MQ=255)                            caacccGTTTA‑ATAGAAAACCACCCCCCCGCTTTTTTTTGGCCGCCCGC‑A‑T‑TT‑T‑T‑CCCACCC‑GTTTTCCCCCCCCC‑CCCCCCCAAACAAAC‑CACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCAt                                                                           <  4:325022/134‑1 (MQ=255)                              aaaCTTTTA‑ATACAAAAAAATCCCGCCGCTTTTTTTTGGCCGCCAGC‑CTT‑TT‑T‑A‑GCCCCCG‑GTTTTCTCCGCC‑C‑ACCCCCG‑AAAAAAACGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGa                                                                         <  5:127614/139‑1 (MQ=255)                              aaaCGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGCGT‑T‑TT‑T‑C‑GCAGCCG‑GTTTTCTCCGCCGC‑ACCCCGC‑AAGAAAC‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGa                                                                         <  5:201269/139‑1 (MQ=255)                              aaaCGTTTC‑ATACAAAACCACCCCTCCGCTTGTTTTGGGCCGCCCGC‑A‑T‑TT‑T‑T‑CCCCCCCGGTTTTCTCCGCCCC‑CCCCCGA‑AACAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGa                                                                         <  7:90148/139‑1 (MQ=255)                              aaaCGTTTA‑ATACAAAAACATCCCTCCGTTTTTTTTTGGCTGCAACC‑C‑T‑TT‑TAA‑CCAGCCC‑GTTTGCTCTCCCCA‑AGCCCGC‑AATAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGa                                                                         <  7:39776/139‑1 (MQ=255)                               aaCCTTTCAATACAAAAAAACCCCTCCGCTTGTTTTGGGCGGGCAGCTT‑T‑TT‑T‑C‑CCACCCG‑GTTTCCCCCCCCCC‑CCCCCCC‑AACAAAC‑CACGGCCGATTTCTTTTCTTGCAAACTAGCGGCTCTAGCAAAACTCATGa                                                                         <  8:440613/139‑1 (MQ=255)                                cggTTTC‑AAAAAAAAAAACCCCGCGGCTATTTTTGGGCCGGCAGC‑CTT‑TT‑T‑C‑GCCGCCG‑TTTTGCTCCGCCTC‑CCCCCCA‑AATAAAA‑CCCGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGAct                                                                       <  7:334375/137‑1 (MQ=255)                                agttttC‑TTAAAAAAACATCCTTCCGCTTTTTTTGGGAGGGCGGCTT‑T‑TT‑T‑C‑CCCGCCT‑GTTTCCTCCGCCGC‑AGCCCCC‑AAAAAAC‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGAct                                                                       <  6:225560/136‑1 (MQ=255)                                acttttA‑ATAAAAAAACATCCCGCCGTTTTTTTTTGGCCGGCTGC‑T‑T‑TT‑T‑T‑CCAAGCC‑GTTTT‑TCACCCCCGACCCCCCAAATAAAC‑CACGGCCGATTTCTTTTCTCGCAAACTCGCGGCTCTAGCAAAACTCATGAct                                                                       <  4:78435/136‑1 (MQ=255)                                aCGTTTC‑ATAGAAAAACATCCCTCCGCTTGTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACGCAGGAct                                                                       >  5:3503/1‑139 (MQ=255)                                aCGTTTC‑AAAAAAAACAACCCCTCCGCTTCTTTTTGCCAGGCAGC‑T‑T‑TT‑TAA‑GCCGCCC‑GTTTTCACCGCCCC‑AGCCCCC‑AAAAAAC‑CACGGCCGATTTCTTTTATCGCAAACTAGCGGCTCTAGCAAAACTCATGAct                                                                       <  5:7230/139‑1 (MQ=255)                                aCGTTTA‑ATATAAAAACAACCCTCCGCTTATTTTTGGCTGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCGCACCCGC‑CGCCCGC‑AACAAAA‑CACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGAct                                                                       <  8:63994/139‑1 (MQ=255)                                aCGTTTA‑ATACAAAACCATCCCGCCGCTTCTTTTGGGCCGGCCGCGT‑T‑TT‑T‑C‑GCCGCCG‑GTTTTCTCCGCCCC‑CGCCCGA‑AATAAAC‑CACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGAct                                                                       <  4:194929/139‑1 (MQ=255)                                 cGTTCC‑ATACAAAAACAACCCTCCGCTTCTTTTTGGCCGGCCGC‑C‑T‑TT‑T‑ACGCAGCCC‑GTTTTCTCCCCCGC‑CCCCCCA‑AAGAAAC‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGActc                                                                      <  3:403932/139‑1 (MQ=255)                                      c‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGAGTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTAATGACTATATGa                                                                 >  5:347838/1‑139 (MQ=255)                                        aTAGAAAAACTCCCCTCCTCTTATTTTTGGCCGGCAGC‑CTT‑TT‑T‑C‑GCAGCCG‑TTTTTCTCCCCCCC‑ACCCCCC‑AACAAAA‑CACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGAt                                                                <  2:252415/139‑1 (MQ=255)                                            aaaaaCAACCCTCCGCTTCTTTTTGGCAGGCAGC‑C‑T‑TT‑T‑ACGCCGCCG‑GTTTCCTCCCCCGC‑ACCCCCA‑AATAAAC‑CACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGAc                                                            <  3:408476/139‑1 (MQ=255)                                                      cTCCGCTTCTTTTTGGCAGGCAGC‑CTT‑TT‑T‑A‑GCAGCCC‑GTTTACTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGaaa                                                    >  4:435348/1‑137 (MQ=255)                                                                 tttGGCAGGCAGC‑CTT‑TT‑T‑C‑GCCGCCC‑TTTTGCTCACCCGC‑ACCCCGC‑AACAACC‑CACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCtt                                          <  8:244373/136‑1 (MQ=255)                                                                  ttgtccggcagC‑CTT‑TT‑T‑A‑CCAGCCC‑GTTTTCTCCCCCGC‑ACCCCGA‑AAGAAAC‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGt                                       <  8:107962/132‑1 (MQ=255)                                                                    ggcccgcagC‑CTT‑TT‑T‑A‑GCAGCCC‑GTGTTCCCCCCCGC‑CCCCAGC‑AAGAACA‑CACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTATCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTca                                     <  1:27661/133‑1 (MQ=255)                                                                    ggcaggcaGCTT‑T‑TT‑T‑C‑GCTGCCC‑GTTTGCTCACCCGC‑TCCCCCA‑AATAAAC‑CACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTca                                     <  4:468425/138‑1 (MQ=255)                                                                                             gcCC‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCCCACAAGCGGCGCTAGCAAACCTCATGCCTCGATGCTAGGCCGTGGAAAGAGAATTGTTTGTGCCAAAATGAGTGCAAAAACCaa                >  4:246152/1‑139 (MQ=255)                                                                                              ccc‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCaa                >  5:40199/1‑138 (MQ=255)                                                                                              ccc‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAAc               >  6:391321/1‑139 (MQ=255)                                                                                              ccc‑GTTTTCTCAGCCGC‑AGCCCGC‑AAGAAAA‑GACGGCCGAGTTCTTTTCTCGCAAACTAGCCGCTCTAGCAAAACTCATGACTCTATGATAGAACGTGGAAAGAGAATTATTTTTCACATAATGATTGAAAAAACCCAc               >  8:186193/1‑139 (MQ=255)                                                                                                            ccGC‑AGCCCGC‑AAGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACAGTGGAAAGAGAAGTCTTTTTCACAATATGAGTGAAAAAACCAACTAGTTTTTAGAAg  >  8:151042/1‑139 (MQ=255)                                                                                                                         ||                                                                                                                                AGACCATCCACACCCGTAAAGATACAAGCAAACGTTTC‑ATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑C‑T‑TT‑T‑A‑GCAGCCC‑GTTTTCTCAGCCGC‑AGCCCAC‑GGGAAAA‑GACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTTTTTAGAAG  >  CP006881/3725129‑3725366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑