| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | pSIJ663_pHT315_araE_xy | 11,255 | +ACACCCGCCA | 12.8% | intergenic (+6524/–) | ampR → / – | –/– |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | pSIJ663_pHT315_araE_xy | = 11255 | 6226 (0.800) | 958 (0.110) +ACACCCGCCA |
3/174 | NT | 12.8% | intergenic (+6524/–) | ampR/– | –/– |
| ? | pSIJ663_pHT315_araE_xy | 11256 = | 6963 (0.750) | intergenic (+6525/–) | ampR/– | –/– | |||||
Only 100 of 958 total aligned reads displayed.
TTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > pSIJ663_pHT315_araE_xy/11117‑11255‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTA > pSIJ663_pHT315_araE_xy/11256‑11315 |||||||||| TTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCTCTCGAGGAAATTGAAAACCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGAGCTTTTTTGTGTCATAATTAAGCCAGCCCCGA > 5:210487/1‑139 TTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGGAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGA > 6:370567/1‑139 TTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGA > 1:3254/1‑139 TTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCACCCCCGA > 5:267266/1‑139 aGTTTCCTGTTTGTCGTTACGATCTGTCCACAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTAGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTATTTTGTGTCATAATTAAGCCAGCCACGAC > 5:152083/2‑139 TGTTTCCTGTTTGTCGTTACGATCTTCCAATAAACGAAGAACAAATCGCTCGAGCAATTTTAAAAGATTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGA < 5:224976/138‑1 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTTTCATAATTAAGCCAGCCCCGAC > 4:44369/1‑139 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGAC > 4:280871/1‑139 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGAC > 2:348599/1‑139 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGAC > 8:151390/1‑139 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGAC > 1:40263/1‑139 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGAC > 5:28585/1‑139 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGAC > 3:9785/1‑139 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGAC > 3:329818/1‑139 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGA > 4:363212/1‑138 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGA > 3:113565/1‑138 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGA > 4:79251/1‑138 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGA > 5:132778/1‑138 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGA > 8:319925/1‑138 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGA < 7:6087/138‑1 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGA > 7:85654/1‑138 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGAATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGA > 7:273106/1‑138 TGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTCAAAAGCTTTGGAAAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGA < 3:295550/138‑1 TTTGCTTTTTGTCGTTAGGATGTGTCCAGAACCGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGATATTGCTGCGCTTTTTTGTGTCATATTTAAGCCAGCCCCGACA < 6:195021/138‑1 TTTCTTGTTTGTGGTTACTATCTTTCACGAAACGAATAACAATTCGCTCGTGTATATTGAAAAGCTTTGTATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 4:130219/138‑1 TTTCCTGTTTGTCGTTACGTCCGCGCCAGAACCGAAGAACAAAGCGCGCGCGGAAATTGAAAAGCTTTGCATAAAATGAAAAAACGCGCAGCTGATATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACAC < 4:157880/139‑1 TTTCCTGTTTGTCGTTACGATGTGTCCAGAAACGAATAACAAATCGCTCGAGGAAATTGAAAAGCTTTTGATAAAATCAAAATAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 7:315253/138‑1 TTTCCTGTTTGTCGTTACGATCTTTCCATAAACGAACAACAAATCGCTCGAGGAATTTGAAAAGCTTTGGATAAAATCAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 1:30812/138‑1 TTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGTAAATTGAAAAGCTTTGGAAAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 5:7057/138‑1 TTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAACGCTTTGTATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 3:74257/138‑1 TTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACAC < 8:219135/139‑1 TTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACAC < 1:125116/139‑1 TTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACAC < 1:71485/139‑1 TTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 7:130342/138‑1 TTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 5:344889/138‑1 TTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGAATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 8:278668/138‑1 TTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCCAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 8:104826/138‑1 TTTCCTGTTTGTCGTAACGTTCTGTCCATAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTTGATAAAATTAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACAC < 1:101069/139‑1 TTTCCTGTTTGGCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 4:395299/138‑1 TTTCCTGATTGTCGTTACGATCTGTCCACAAACTAATAAAAAATCGCTCGAGGAAATTGAAAAGATTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 2:234236/138‑1 TTCCTGTTTTTCGTTACTATCTGTCAAGAAACGAATAACAAATCGCTCTAGGAAATTGAAAAGCTTTGTATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACAC < 2:91474/138‑1 TTCCTGTTTGTGGTTACGTTCTTTCCATAAACTAATAACAAATCGCTCGTGGAAATTGAAATGCTTTGTATAAATTGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACAC < 6:324724/138‑1 TTCCTGTTTGTCGTTACCATCTGTCCACAAACTAATAACAAATCGCTCGAGTAAATTGAAAAGCTTTGTATAAAATTAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACAC < 6:135616/138‑1 TCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGCCACCC > 1:28133/1‑139 TCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCC > 5:323108/1‑139 TCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCC > 8:301542/1‑139 TCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCC > 3:216669/1‑139 TCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCC > 1:207139/1‑139 TCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 6:84525/136‑1 CCTGTTTGTGGTTACGTTCTGTCCAGAAACCAACAACAAATCGCTCGAGTAAATTCAAAAGCTTTGTATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCC < 1:141809/138‑1 CTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGC > 5:107932/1‑139 CTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGC > 4:240667/1‑139 CTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGC > 6:303354/1‑139 CTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCACGAAACCCGC > 2:174021/1‑139 CTGTTTGTCGTTACGATCTGACCAGAAACGAATAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTCTCATAATTAATCAAGCCACAACACCAGC > 6:346620/1‑139 TGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATTAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCC > 1:167722/1‑139 TGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGCCCCCCGCC > 6:240314/1‑139 TGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCC < 2:60793/139‑1 TGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGC > 7:160691/1‑138 TGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGC > 5:394844/1‑138 TGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGC > 4:184196/1‑138 TGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGC > 3:141158/1‑138 TGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGC > 8:335139/1‑138 TGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGC > 6:163218/1‑138 TGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGC > 3:399351/1‑138 TGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGC > 8:369397/1‑138 GTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCC > 3:368406/1‑138 GTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCC > 4:200567/1‑138 GTTTGTCGTTACGATCTGTCCAGAAACCAAGAACAAATCGCTCGAGCAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCTCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCCCC > 8:127699/1‑138 TTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCC < 3:253321/137‑1 TTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCC < 3:168707/137‑1 TTTGGCGTTACGATCTGTCCAGAAACGAATACCAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAAGGAAAAAACGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCC < 7:201697/137‑1 TTGTTGTTACGATATGAGCAGAAACAAATAAAAAATCCCTCTAGCAAATTTAAAAGCTTTGGATAAAATTAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCCAA < 2:301433/138‑1 TTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATTGCTGGGCGTTTTTGTTTGATTATTAAGCCAGCCCCGCCGCCCGgcccc > 2:192837/1‑134 TTGGCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCGCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAACCGCACCTGAAATTGCTGCGGTTTTTTGTGTACTATTTAAGCCAGCCAGGACACCCCCCCAC > 6:213975/1‑139 TGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCCAAC < 8:188775/138‑1 TGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCCA > 2:270440/1‑136 GTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCCAACAC > 8:262867/1‑139 GTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCCAACAC > 7:246996/1‑139 GTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCCAACAC > 6:395527/1‑139 GTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCCAACA < 1:379962/138‑1 GTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGA > 7:291382/1‑126 GTTACGTGCTGCGCACAAACGAATAACAATTCGCTCCAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAACGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCCAACACCCG < 6:111767/139‑1 TTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGC > 7:366392/1‑139 TACGATCTGCCCAAAAACTAATAAAAAATCGCTCGAGGAAATTTAAAAGCTTTGGAAAAAATCAAAAAACGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCCAACACCCG < 2:391876/137‑1 ATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA > 4:302536/1‑119 TCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCCAAC < 8:44072/123‑1 TCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 2:116675/114‑1 TCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 3:196930/114‑1 AAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 7:111535/109‑1 AAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGA > 7:396030/1‑107 GAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 6:274010/105‑1 AAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCCAACACC > 5:182423/1‑116 AAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACC > 8:75575/1‑106 TCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 1:96691/91‑1 TCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA > 5:307307/1‑91 TGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACA < 1:262471/81‑1 TGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCC > 1:22702/1‑77 AGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTA < 7:33557/121‑1 TGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCGACACCCGCCAAC < 1:354325/46‑1 |||||||||| TTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAATTAAGCCAGCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > pSIJ663_pHT315_araE_xy/11117‑11255‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTA > pSIJ663_pHT315_araE_xy/11256‑11315 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |