| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,528,808 | C→A | 10.1% | intergenic (‑61/‑79) | U712_07870 ← / → U712_07875 | Uncharacterized protein ylbA/Uncharacterized protein ylbB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,528,808 | 0 | C | A | 10.1% | 346.4 / 4.4 | 142 | intergenic (‑61/‑79) | U712_07870/U712_07875 | Uncharacterized protein ylbA/Uncharacterized protein ylbB |
| Reads supporting (aligned to +/- strand): ref base C (66/57); new base A (3/15); total (69/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.52e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 142 total aligned reads displayed.
TGCTTTCCATTAAGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGATA > CP006881/1528672‑1528944 | tGCTTTCCATTTAGTCGTCTAGCCCGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTAAGTAAACATCAACACTGACCCCTCCTTATAAAAATTACCTTTCATGACAATCATAGTTTTAAAGCGTTAAACTTTCaa > 4:134626/1‑139 (MQ=255)tGCTTTCCATTAAGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCaa > 7:376631/1‑139 (MQ=255)tGCTTTCCATTAAGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGAATGAAAGCGTTAAAATTTCaa > 1:191426/1‑139 (MQ=255) cTTTCCATTAAGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAAt < 3:366712/138‑1 (MQ=255) tCCATTAAGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGaa > 7:26285/1‑138 (MQ=255) tCCATTAAGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAAt > 5:169184/1‑139 (MQ=255) tCCATTAAGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAAt > 3:153600/1‑139 (MQ=255) aaGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAAtc > 1:302145/1‑134 (MQ=255) aaGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAAtc < 2:302145/134‑1 (MQ=255) aGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAAtcttcttc > 2:99240/1‑139 (MQ=255) aGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTACGCTTTCAGTAAAATTCACAACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTAAATTAAtattcttc > 3:301749/1‑139 (MQ=255) gtcTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCGCCATATAAAAATTACCTTTCCTGCCAATCATAGTATGAAAGCGTTAAACATTCAATGAATCTTCTTCtttt > 1:96834/1‑139 (MQ=255) tcTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGCCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCtttt > 6:200728/1‑138 (MQ=255) tcTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTAAATGAATCTTCTTCtttt > 6:245503/1‑138 (MQ=255) cTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATg > 3:70240/1‑138 (MQ=255) cTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATg > 7:258708/1‑138 (MQ=255) aGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAaaatt > 8:117430/1‑138 (MQ=255) aCCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGCCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAAtttt > 4:11700/1‑138 (MQ=255) aCCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAAtttt > 4:242304/1‑138 (MQ=255) aCCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACATTTCCTGACAATCATAGTATGAAATCGTTAAACTTTCAATGAATCTTCTTATTTTGAAAGTATTCAAAAATTAAAtttt > 6:209489/1‑138 (MQ=255) cccTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgac < 8:376631/139‑1 (MQ=255) ccattCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTTAAATTTTGAAAAAATTAAATTTTgac < 6:169184/136‑1 (MQ=255) cTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgaag > 1:295234/1‑136 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAATGTATGCAAAAATTAATTTTTgacga > 1:209300/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacta > 4:234069/1‑136 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 4:321530/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 2:243418/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 3:265183/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 7:373963/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 3:127332/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgac > 3:117391/1‑136 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgac < 4:117391/136‑1 (MQ=255) acgTCCGCTTTAATTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTCACAATCATAGTATGAATGCGTTAAACTTTAAATGAATCTTCTTCTTTTGAATGTATGCAAAAATAAATTTTTGACGACAAt < 2:209300/137‑1 (MQ=255) aaGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACaa < 7:79208/138‑1 (MQ=255) ccGCTTTCAGTAAACTTCAACACTGACCCCTCCATATAAAAATAACCTTACATGACAATCATAGTATGAAAGCGTAAAACTTTCAATGAATCTTATTCTTTTTAAAGTATGCAAAAATTAAATTTTGACGACAATAGCa < 5:209489/139‑1 (MQ=255) cGCTTTCCGTAAACTTCAACACTGACCCCTCCTTATAAAATTTCCCTTTCCTGACAATCAAAGTATGAAAGCTTAAAAATTTAAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTGCACGACAATAGCAc < 3:139627/139‑1 (MQ=255) cGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTTACAATCATAGTATGAAAGCGTTAAACTTTAAATGAATCTTCTTCTTTTGAAAGTATGAAAAAATTAAATTTTGACGACAATAGCAc < 4:153600/139‑1 (MQ=255) cGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCAc < 1:236258/139‑1 (MQ=255) cGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCAc < 8:26285/139‑1 (MQ=255) cGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATAAAATTTTGACGACAATAGCAc < 3:162098/139‑1 (MQ=255) cTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCAc > 8:266005/1‑137 (MQ=255) cTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTAAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCaa > 8:391973/1‑136 (MQ=255) aagaaaaaTTCAACACTCCACCCTCCTTATAAAAATTACCTTTCCTGACAATCATATTATTAAAGCGTTAAACTTTCAATTAATCTTATTCTTTTGAAATTATGAAAAAATTAAATTTTGACGACAATAGCACTAGAc < 8:373963/134‑1 (MQ=255) aaaCTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTaaa < 1:396555/138‑1 (MQ=255) aaaCTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGAAAAAATTAAATTTTGACGACAATAGCACTAGACTaaa < 4:376157/138‑1 (MQ=255) aCTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAag > 7:189557/1‑137 (MQ=255) aaCACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATTCTAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGtt > 5:273503/1‑138 (MQ=255) aaCACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAAATTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGtt > 2:39794/1‑138 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACaa < 5:271916/109‑1 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTTAACGGAt > 8:334664/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACTGAt > 1:159421/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 8:46039/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 5:27754/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 4:167358/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAAGTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 4:243259/1‑139 (MQ=255) cctcctTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGAc < 1:243418/139‑1 (MQ=255) tcctTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACa > 7:90508/1‑138 (MQ=255) tcctTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACa > 8:191781/1‑138 (MQ=255) cattATAAAAATTACCTTTCCTCACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTATTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACaaa < 5:192553/137‑1 (MQ=255) ttATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACaaaaa > 8:127399/1‑139 (MQ=255) atataaTTACCTTGCCGCAAAATCATAGTATGAAAGCGTTAAAAATTACAGTTATCTTCTTTTTTTGAAAGTAATAAAAAATTAAATTTTGACGACAATAGCACTCGACTAAAGGAGGTTAAACGGATGACACAAATaa < 8:186097/135‑1 (MQ=255) aTTACCTTTCCTGACAATCATAGTATTAAAGCGTTAAAATTTAAATTAATATTCTTCTTTTGAAATTATCAAAAAATTAATTTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGAt < 2:212730/139‑1 (MQ=255) ttACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCTCTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATc > 1:302530/1‑139 (MQ=255) ttACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATc > 3:254890/1‑139 (MQ=255) ttACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATc > 5:349469/1‑139 (MQ=255) aCAATAATAGTATCAAAGCGTTAAATTTTCAATGAATATTATTGTTTTGAAAGTATGAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCg < 3:234069/139‑1 (MQ=255) cAATCATATTATGAAAGCGTTAAACTTTCAATGAATCTTATTCTTTTGAAAGTATGAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCg < 7:3406/138‑1 (MQ=255) cAATAATAGTATTAACTGGTTAAACTTTAAATGTATCTTCTTCTTTTTAAATAATGAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCg < 6:329290/138‑1 (MQ=255) tCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACtt > 5:329290/1‑139 (MQ=255) tAGTATCAAAGCGTAAAACTTACAATCAATTTTCTTTTTTTTAAATTATCAAAAAATTAATTTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCa < 3:11700/139‑1 (MQ=255) tGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATAtt > 3:305722/1‑139 (MQ=255) tGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATAtt > 3:60043/1‑139 (MQ=255) taGCGTTAAACTTTCAATGAATCTTCTTCTTTTTAATGTATTAAAATTTTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATTACAGCCGACTTGCAATATTGCa < 4:149320/138‑1 (MQ=255) atgatatAAACTTTCATTTAATGTTCTTATTTTTAATTAATTAAAAAATAAATTTTTGTCGACAATAGCACTAGACTAAAGGTGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:254890/133‑1 (MQ=255) atgCGTTAAACTTTGATTTAAGCTTGTTATTTTTAAAGTATGCATAAATTAATTTTTGACGACAATTGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 2:96834/137‑1 (MQ=255) acgatttAAACTTTCAATCAATCTTATTGTTTTGAATGTAAGAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 1:377166/134‑1 (MQ=255) aatgtttAAACTTTCAATGAATATTCTTATTTTGAAATTATGAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 7:391973/134‑1 (MQ=255) aaGCTTTAAACTTTCAATTAATCTTCTTCTTTTGAAAGTATGCAAAAATAAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 7:117430/139‑1 (MQ=255) aaGCTTTAAACTTTCAATGAATCTTATTATTTTGAAAGTATGAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 1:99240/139‑1 (MQ=255) aaGCGTTAAAGTTTCAATGAAACTTCTTCTTTTGAAAGATTGCAAACATTAACTTTTGCCGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATGTGATGACAGCCGACTTGCAATATTGCa < 2:85823/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAATTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 5:245503/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAATTATCAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:87616/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 3:290994/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:305722/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:349469/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 3:241702/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 7:46039/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 3:348148/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 3:186191/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATATTCTTCTTTTTAAAGTATCAAAAAATTAAATTTTGACGACAATAGCTCTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 2:302530/139‑1 (MQ=255) aaGCGTTAAAATTTCAATGAATCTTCTTATTTTGAAATTATTCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 2:259174/139‑1 (MQ=255) aaGCGTTAAAATTTAAATTAATCTTATTCTTTTGAAAGTAAGAAAAAATTAAATTTAGACGACAATAGCACTAGACTAAAGTAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 3:134626/139‑1 (MQ=255) aaGCGTTAAAATTTAAATGAATATTCTTCTTTTTAATTTATCAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 8:204860/139‑1 (MQ=255) aaGCGTAAAAATTTAATTTATTATTATTATTTTTAAATTATTAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:27754/139‑1 (MQ=255) gtttAAATTTTCAATTATTATTTTTCTTTTTAATGTATGAAAAAATTATATTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAAGGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACg < 4:70240/136‑1 (MQ=255) ttAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCTACTTGCAATATTGCACGGTa > 6:187723/1‑139 (MQ=255) aatatttAAATTAATTTTATTCTTTTTAATTTTTTAAAAAATAAATTTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTAt < 2:191426/134‑1 (MQ=255) ttttCATTTAATTTTATTTTTTTTAAATTATTAAAAAATAAATTTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGa < 2:330275/138‑1 (MQ=255) cTTTCAATGAATCTTCTTCTTTTTAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGa < 7:191781/139‑1 (MQ=255) cTTTCAATGAATCTTATTCTTTTTAATGTTTGCAAAAATTAAATTTGCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGa < 6:273503/139‑1 (MQ=255) | TGCTTTCCATTAAGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGATA > CP006881/1528672‑1528944 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |