| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 2,922,371 | T→G | 6.0% | E176D (GAA→GAC) | U712_15050 ← | Leucyl‑tRNA synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,922,371 | 0 | T | G | 6.0% | 285.1 / 4.9 | 109 | E176D (GAA→GAC) | U712_15050 | Leucyl‑tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base T (37/64); new base G (3/4); total (40/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 113 total aligned reads displayed.
ATCCAGTTGCGCTGCATATCTTTAATGCTTTCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGTATAGCTTTAAGAAAATCCATTGCGTCCATTTATA > CP006881/2922234‑2922505 | aTCCAGTTGCGCTGCATATCTTTAATGCTTTCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGtt < 2:43423/139‑1 (MQ=255)aTCCAGTTGCGCTGCATATCTTTAATGCTTTCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGtt < 7:15936/139‑1 (MQ=255) ttGCGCTGCATATCTTTAATGCTTTCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGctct > 4:150623/1‑139 (MQ=255) cgcTGCATATCTTTAATGCTTTCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTg < 6:339024/138‑1 (MQ=255) cTGCATATCTTTAATGCTTTCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCg > 1:150720/1‑139 (MQ=255) cTGCATATCTTTAATGCTTTCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCg > 5:210862/1‑139 (MQ=255) atatCTTTAATGCTTTCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCaa < 3:172774/139‑1 (MQ=255) tatCTTTAATGCTTTCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAAt > 5:271898/1‑139 (MQ=255) aaTGCTTTCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGtt > 5:255263/1‑116 (MQ=255) aaTGCTTTCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGtt < 6:255263/116‑1 (MQ=255) aTGCTTTCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGActtctt > 7:175396/1‑139 (MQ=255) cTTTCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCg < 8:346813/138‑1 (MQ=255) cTTTCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCg < 6:210862/138‑1 (MQ=255) ttCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTg > 2:231065/1‑139 (MQ=255) ttCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTg > 4:381107/1‑139 (MQ=255) ttCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTg > 7:101129/1‑139 (MQ=255) tCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTgg > 4:149966/1‑139 (MQ=255) tCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTgg > 8:46045/1‑139 (MQ=255) tCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTgg > 4:283754/1‑139 (MQ=255) tCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTgg > 1:260538/1‑139 (MQ=255) tCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTgg > 7:6060/1‑139 (MQ=255) tCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTATCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTgg > 4:192541/1‑139 (MQ=255) gacagcAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 1:334969/134‑1 (MQ=255) ccGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 2:179903/139‑1 (MQ=255) cGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGTGCGGCTCTCTACCGGATGGCCGCCGCGTTAGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 1:382415/138‑1 (MQ=255) cGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 7:46045/138‑1 (MQ=255) cGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 1:377094/138‑1 (MQ=255) cGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 5:400380/138‑1 (MQ=255) cGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 8:124054/138‑1 (MQ=255) cGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 6:81240/138‑1 (MQ=255) cGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 3:136186/138‑1 (MQ=255) cGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 8:175332/138‑1 (MQ=255) cGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 1:231065/138‑1 (MQ=255) cGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 6:95426/138‑1 (MQ=255) cGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 3:208485/138‑1 (MQ=255) cGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGGTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 7:344548/138‑1 (MQ=255) ggCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCATCATCCACTGCTTCATTGGGCGTCTCTCTACCGTATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCaa < 8:192919/139‑1 (MQ=255) caatcaatCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGaa < 8:6060/139‑1 (MQ=255) cAATGAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGaa < 1:339687/139‑1 (MQ=255) aTCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACa < 7:154121/139‑1 (MQ=255) gCTCTTCCAAGGCCTCAAGGAGCCTGTCCTGATAAGAGGTGATTTTCAGCATCCACTGGTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTAcc < 7:161287/139‑1 (MQ=255) tCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAgcg > 1:36715/1‑139 (MQ=255) gTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTGTTCGTTGGCAAGAACAGTACCGAGCGCAggg > 3:140477/1‑139 (MQ=255) gTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTATCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAggg < 3:192541/139‑1 (MQ=255) cTCAAGGAGCCTGTGCGCATAAGCGGTGATTTTCAGCAGCCACTGCTTCATTGGGCGTCGCTCTACCGGCTGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCAc < 3:95213/139‑1 (MQ=255) cTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCAc < 6:285295/139‑1 (MQ=255) cTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCAc < 3:150623/139‑1 (MQ=255) cTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCAc < 1:213393/139‑1 (MQ=255) cTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCAc < 7:138853/139‑1 (MQ=255) tCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCg > 2:327860/1‑108 (MQ=255) tCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc > 2:2021/1‑113 (MQ=255) tCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 1:2021/113‑1 (MQ=255) tCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTAGTGCCCTCAATTACTTAATAGTTGGCAACAACAGTAACTAGCCCAGGGcccc > 2:360034/1‑139 (MQ=255) aaGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAg < 2:150720/139‑1 (MQ=255) acTGTGCGCATAAGCGGTGATTTGCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGGTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACa < 5:337654/138‑1 (MQ=255) tCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCa > 7:207024/1‑139 (MQ=255) aTAAGCGGTGAGTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACAGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCg < 8:358043/139‑1 (MQ=255) tAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGt < 2:57952/139‑1 (MQ=255) cGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCg < 6:401596/86‑1 (MQ=255) cGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCg > 5:401596/1‑86 (MQ=255) cGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGGTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCg < 7:354953/134‑1 (MQ=255) cGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGGTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCg > 8:354953/1‑134 (MQ=255) ggTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACg < 7:353254/139‑1 (MQ=255) ggTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACg < 1:360034/139‑1 (MQ=255) gTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 1:21905/89‑1 (MQ=255) gTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc > 2:21905/1‑89 (MQ=255) aGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGc < 6:200721/139‑1 (MQ=255) cATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGGTCGCTCTTGCCGGCAATGACTTCTTAGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTAAAGGCACTTCGTCAACGTAAGCAAGGCCt > 5:280651/1‑139 (MQ=255) aTCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCtt < 3:283754/139‑1 (MQ=255) aTCCACTGCTTCATTGGGCGGCGCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCATCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCtt < 4:77490/139‑1 (MQ=255) aCTTCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCGTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCGTTTTc > 2:314323/1‑139 (MQ=255) gCTTCATTGGGCGTCGCTCTACCGGAGGGCCGCCGCGGTCGCGCTTGCCGTCCCGGACTTCTTCGTTGGCAAGAACAGTCCCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTATCGta < 2:301504/139‑1 (MQ=255) cTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGta < 8:175396/138‑1 (MQ=255) cTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGta < 8:118274/138‑1 (MQ=255) cTTCATTGGGCGGCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGtat < 4:186698/139‑1 (MQ=255) gCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGTATAGCTTTAAg < 2:260538/139‑1 (MQ=255) cGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGCGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGTATAGCTTTAAg > 3:311079/1‑138 (MQ=255) ctctctACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCAc < 7:393698/81‑1 (MQ=255) ctctctACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCAc > 8:393698/1‑81 (MQ=255) ccGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGTATAGCTTTAAGAAAATCCATTg < 3:171689/139‑1 (MQ=255) ggATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGTATAGCTTTAAGAAAATCCATTGCg < 4:18165/139‑1 (MQ=255) ggATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGTATAGCTTTAAGAAAATCCATTGCg < 2:36715/139‑1 (MQ=255) ggATGGCCGCCGCGTTCGATCTTGCCGTCAATGACTTCTTCGTTGGGAAGAACAGTACCGAGCGCATGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGTATAGCTTTAAGAAAATCCATTGCg < 8:249153/139‑1 (MQ=255) gATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCg < 7:363706/41‑1 (MQ=255) gATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCg > 8:363706/1‑41 (MQ=255) gATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 5:57532/46‑1 (MQ=255) gATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc > 6:57532/1‑46 (MQ=255) gATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACa < 3:222280/53‑1 (MQ=255) gATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACa > 4:222280/1‑53 (MQ=255) gATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGTATAGCTTTAAGAAAATCCATTGCGt < 4:58252/139‑1 (MQ=255) gATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCATCGTTGGCAAGAACAGTACCCCGCGCCGGGCACCACTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGTATAGCTTTAAGAAAATCCATTGCGt > 1:201467/1‑139 (MQ=255) ggCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGc < 1:242905/43‑1 (MQ=255) ggCCGCCGCGTTAGCTCTTGCCGTCAATGACTTCTTCGTTGGc > 2:242905/1‑43 (MQ=255) gccgccGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGTATAGCTTTAAGAAAATCCATTGCGTCCAt < 1:402826/139‑1 (MQ=255) ccgccgCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAggg < 8:305856/63‑1 (MQ=255) ccgccgCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGTATAGCTTTAAGAAAATCCATTGCg > 8:212983/1‑133 (MQ=255) ccgccgCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGTATAGCTTTAAGAAAATCCATTGCg < 7:212983/133‑1 (MQ=255) ccgccgCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGTATAGCTTTAAGAAAATCCATTGCGTCCAtt > 6:202777/1‑139 (MQ=255) ccgcGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGTATAGCTTTAAGAAAATCCATTGCGTCCATTtat < 8:101129/139‑1 (MQ=255) cgcgCTCGCTCTTGCCGTCAATGACTTCATCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGGAAGCAAGGCCTTTTTCGTATAGCTTTAAGAAAATCCATTGCGTCCATTtata < 6:315775/139‑1 (MQ=255) | ATCCAGTTGCGCTGCATATCTTTAATGCTTTCCGGCCAATCAAGCTCTTCCAAGTCCTCAAGGAGCCTGTCCGCATAAGCGGTGATTTTCAGCATCCACTGCTTCATTGGGCGTCTCTCTACCGGATGGCCGCCGCGTTCGCTCTTGCCGTCAATGACTTCTTCGTTGGCAAGAACAGTACCGAGCGCAGGGCACCAGTTTACAGGCACTTCGTCAACGTAAGCAAGGCCTTTTTCGTATAGCTTTAAGAAAATCCATTGCGTCCATTTATA > CP006881/2922234‑2922505 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |