Predicted mutation
evidence seq id position mutation freq annotation gene description
JC pSIJ663_pHT315_araE_xy 2,655 Δ3 bp 100% intergenic (–/‑321) – / → eryR –/–

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? pSIJ663_pHT315_araE_xy = 265435 (0.010)5378 (1.080) 204/232 NT 99.4% intergenic (–/‑324) –/eryR –/–
?pSIJ663_pHT315_araE_xy 2658 = 35 (0.010)intergenic (–/‑320) –/eryR –/–

Only 100 of 6549 total aligned reads displayed.

GAACTATTGATGCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  pSIJ663_pHT315_araE_xy/2517‑2654
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGCGTAATGT  >  pSIJ663_pHT315_araE_xy/2658‑2795
                                                                                                                                                                                                                                                                                    
    TATTGATGCTGGGGATACTATTTACAGCGGCTCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGGAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  4:237056/139‑1
    TATTGATGATGGGTATAATATTTACAGGGGCGCCATCTACTTATGTCGTTATGGATTTGCAATATAAAGTTATATCATTGCAGTATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  7:223931/139‑1
      TTGATGCTGGGGATACTATTTACAGCGGCGCCTTCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  5:322121/137‑1
      TTGATGCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  3:184065/137‑1
       TGATGCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       >  2:148821/1‑136
         ATGCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACT                                                                                                                                  >  8:322974/1‑139
         ATGCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  4:372660/134‑1
           GCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTT                                                                                                                                 >  1:100332/1‑138
           GCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTT                                                                                                                                 >  6:223365/1‑138
           GCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       >  6:52452/1‑132
           GCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       >  3:154017/1‑132
              GGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGA                                                                                                                             <  6:115332/139‑1
              GGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAA                                                                                                                               >  7:90418/1‑137
              GGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAA                                                                                                                               >  6:278189/1‑137
              GGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAA                                                                                                                               >  1:129808/1‑137
              GGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  2:279527/129‑1
              GGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGGAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCTAAGCAAACTT                                                                                                                                 >  6:361415/1‑135
               GGGATTCTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGTATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              <  6:148500/137‑1
               GGGATACTTTTTCCAGCGGAGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAG                                                                                                                            <  6:2479/139‑1
               GGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              <  2:338622/137‑1
                     CTATTTACAGCTGCGCCATCTACTGATGGCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGT                                                                                                                       <  7:108313/138‑1
                      TATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAG                                                                                                                                        >  2:175722/1‑120
                       ATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGA                                                                                                                    <  5:225828/139‑1
                        TTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGA                                                                                                                    <  4:181827/138‑1
                           ACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGT                                                                                                                >  1:371196/1‑139
                               CGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAG                                                                                                            >  8:261399/1‑139
                               CGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAG                                                                                                            >  5:149176/1‑139
                                 GCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGAGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              >  3:53816/1‑119
                                 GCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTAAATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTA                                                                                                          <  3:239364/139‑1
                                  CGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTAT                                                                                                         >  7:252838/1‑139
                                  CGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTAT                                                                                                         >  1:62631/1‑139
                                  CGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       >  5:34358/1‑109
                                  CGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  1:161041/109‑1
                                  CGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       >  2:3066/1‑109
                                    CCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTTATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCT                                                                                                       >  8:147877/1‑139
                                    CCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              >  7:306772/1‑116
                                         TACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGA                                                                                                                    <  4:295455/121‑1
                                            TGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTT                                                                                               >  2:120954/1‑139
                                            TGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  5:405640/99‑1
                                              ATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTT                                                                                              <  1:194398/138‑1
                                              ATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTT                                                                                              <  4:266542/138‑1
                                                 TCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTG                                                                                           >  6:31082/1‑138
                                                 TCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCG‑TTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTA                                                                                         >  4:34678/1‑139
                                                  CGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAA                                                                                                                                         >  7:280503/1‑91
                                                   GTAAAGTATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGA                                                                                                                    >  2:365587/1‑111
                                                   GTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTAT                                                                                        <  3:384718/139‑1
                                                   GTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTA                                                                                         >  2:85868/1‑138
                                                   GTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  4:150002/92‑1
                                                           TTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAA                                                                                >  1:396991/1‑139
                                                           TTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAA                                                                                >  6:334188/1‑139
                                                               CAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGGTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTG                                                                             <  5:65295/138‑1
                                                                   ATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGT                                                                         >  3:298772/1‑138
                                                                   ATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGA                                                                                                                    >  8:75509/1‑95
                                                                            TATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGAT                                                               >  3:361077/1‑139
                                                                            TATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGT                                                                                                                       <  5:94813/83‑1
                                                                            TATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              <  3:88032/76‑1
                                                                            TATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       >  5:257165/1‑67
                                                                                 TTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTA                                                           >  1:220379/1‑138
                                                                                  TGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAA                                                          >  1:280376/1‑138
                                                                                  TGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAA                                                          >  7:195723/1‑138
                                                                                  TGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTT                                                                                              <  7:372203/102‑1
                                                                                  TGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGT                                                                                                                       <  7:399893/77‑1
                                                                                   GCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAA                                                         >  2:233587/1‑138
                                                                                         TCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTG                                                   >  2:57913/1‑138
                                                                                          CATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGT                                                  >  5:11351/1‑138
                                                                                          CATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              >  7:336936/1‑62
                                                                                           ATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAA                                                <  4:208366/139‑1
                                                                                            TGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAAT                                               >  8:174870/1‑139
                                                                                                 TAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGT                                                  >  1:341908/1‑131
                                                                                                   GCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAG                                        >  4:116789/1‑139
                                                                                                   GCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAG                                        >  3:20981/1‑139
                                                                                                   GCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCA                                                                                                             >  2:205599/1‑70
                                                                                                    CGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAG                                        >  3:119766/1‑138
                                                                                                     GTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGA                                      <  5:183972/139‑1
                                                                                                         TTGAACACGACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGA                                  >  2:254476/1‑139
                                                                                                         TTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGA                                  >  7:167010/1‑139
                                                                                                         TTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGA                                  >  4:400980/1‑139
                                                                                                                CCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCA                           <  8:354231/139‑1
                                                                                                                 CACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCAT                          >  6:188390/1‑139
                                                                                                                 CACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCAT                          <  8:292201/139‑1
                                                                                                                 CACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCAT                          >  8:232942/1‑139
                                                                                                                       ATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATATTAAAATTTTGTGTATAATAGTTATTGAAGTTAACTTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGG                     <  6:82515/138‑1
                                                                                                                           AATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTC                >  3:329897/1‑139
                                                                                                                           AATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCAT                          >  8:117969/1‑129
                                                                                                                           AATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTA                                             >  1:247540/1‑110
                                                                                                                           AATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAAT                                                                                     <  6:387778/70‑1
                                                                                                                               TGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAA             <  3:266700/138‑1
                                                                                                                                GTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAAT           >  7:64102/1‑139
                                                                                                                                 TTGCTCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTGAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTCGTATTCCAAATG          >  8:46277/1‑139
                                                                                                                                 TTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGG                                       >  8:387238/1‑110
                                                                                                                                  TGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGC         >  4:61455/1‑139
                                                                                                                                    ATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGCG        >  5:291895/1‑138
                                                                                                                                    ATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGCG        >  4:322941/1‑138
                                                                                                                                    ATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAG                                           >  2:393937/1‑103
                                                                                                                                     TCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCA                           >  1:93087/1‑118
                                                                                                                                      CCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGGAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGCGTAA     >  7:139385/1‑139
                                                                                                                                      CCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGCGTAA     >  4:91824/1‑139
                                                                                                                                       CCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGCGTA      <  5:372029/137‑1
                                                                                                                                        CCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGATAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGCGTAATG   <  1:309926/139‑1
                                                                                                                                         CGAAGCAAACTTAAGAGTGTTTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTAT                  <  8:205907/123‑1
                                                                                                                                                                                                                                                                                    
GAACTATTGATGCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  pSIJ663_pHT315_araE_xy/2517‑2654
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGCGTAATGT  >  pSIJ663_pHT315_araE_xy/2658‑2795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.