| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,880,629 | A→C | 11.5% | A251A (GCT→GCG) | U712_20000 ← | Uncharacterized protein YxeI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,880,629 | 0 | A | C | 11.5% | 238.7 / 8.0 | 99 | A251A (GCT→GCG) | U712_20000 | Uncharacterized protein YxeI |
| Reads supporting (aligned to +/- strand): ref base A (52/33); new base C (2/11); total (55/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.47e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 102 total aligned reads displayed.
CCGATTGTCATAGTGGTGGAAATAGTAGTTTCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAACAGTTCCTAAGCCTTGGCCAAAAGCAGA > CP006881/3880494‑3880763 | ccGATTGTCATAGTGGTGGAAATAGTAGTTTCCAGTTTGGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGc < 8:334070/138‑1 (MQ=255)ccGATTGTCATAGTGGTGGAAATAGTAGTTTCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGc < 4:222687/138‑1 (MQ=255)ccGATTGTCATAGTGGTGGAAATAGTAGTTTCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCATTATCACTGCGCCCTTTGGTTTCGTCATA‑TTTGCAAAAATTTGAAACGc < 2:169832/138‑1 (MQ=255) cGATTGTCATAGTGTTGTAAATAGTATATTCCAGTTTCTTTGCAATTCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCgg < 1:396108/139‑1 (MQ=255) cGATTGGCATAGTGGTGGAAATCGTAGTTTCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCgg < 1:92985/139‑1 (MQ=255) ttGGCATAGTGGTGGAAATAGTAGTTTCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGGCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTg < 4:177223/139‑1 (MQ=255) gtggtgGAAATAGTAGTTTCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACAcc < 4:82970/138‑1 (MQ=255) gtggAAATAGTAGTTTCCAGTTTCGTTGCACATCACGGAAGTATTTTGCGTATAATGAATTTCGTCTTGTTGCCTTATCACTGCGCCCTTTGGTTTCGGATTT‑TTTGCAAAATTTTGAAAATCGGGTGTTACACCTTTc > 4:8670/1‑139 (MQ=255) gtggAAATAGTAGTTTCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAACGCGGCTGTTACACCTTTc > 2:365539/1‑139 (MQ=255) gtggAAATAGTAGTTTCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTc > 6:399786/1‑139 (MQ=255) tggAAATAGTAGTTTCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCg > 7:148509/1‑139 (MQ=255) ggAAATAGTAGTTTCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGt > 8:48439/1‑139 (MQ=255) ggAAATAGTAGTTTCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGt > 8:136123/1‑139 (MQ=255) gAAATAGTAGTTTCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCAAA‑TTTGCCAAAAATTGAAAACCGGCTGTTAAACcgttcgtt > 5:58659/1‑139 (MQ=255) tCCAGTTTCGTTGCACATCACGGAAGTATTTTGCGATAAATGAATTTCGTCTTCTTCCTTTAACACTGCGCCTTTTGGTATCGTAATT‑TTTCCAAAAATTGAAAAAGCGGCTGTTACACCTTTCGTTTCATCGgccgc < 8:148509/138‑1 (MQ=255) tCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGgccgcc > 5:208368/1‑139 (MQ=255) tCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGgccgcc > 4:405315/1‑139 (MQ=255) tCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGgccgcc > 5:209393/1‑139 (MQ=255) tCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGgccgcc > 5:242527/1‑139 (MQ=255) aGTTTCGTTGCCCCCCACGGACGTATATTGCGTATAATTAATTTCGTCTTATTCCGTAAGCCCTGCGCCCTTGGGTATCGGCATA‑TTTGCCAAATTTTTAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGc < 2:121374/139‑1 (MQ=255) tttCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGctc > 4:105225/1‑139 (MQ=255) cGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGAATCGTCATA‑TTTGCGAAAATTAGAAATGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGctc > 2:317982/1‑136 (MQ=255) caTCACGGAAGTATATTGCGTATATTGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCt < 4:54650/139‑1 (MQ=255) caTCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGATTCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCt < 6:364110/139‑1 (MQ=255) cACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCttt > 4:14926/1‑138 (MQ=255) aaGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAACGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAAt > 1:333567/1‑138 (MQ=255) tataTTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATaaa > 3:183639/1‑138 (MQ=255) tataTTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATaaa > 6:164823/1‑138 (MQ=255) tatTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGgccgcc > 2:283302/1‑111 (MQ=255) tatTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGgccgcc < 1:283302/111‑1 (MQ=255) tatTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCAGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAg > 3:198967/1‑139 (MQ=255) tGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTTCACCTTTCGTTTCTTCGGCCGCCGGCTGTTTATGTTCTTTCAAATATACAGctg > 1:330243/1‑138 (MQ=255) cGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAATTAAACAGCtgtg > 1:172113/1‑139 (MQ=255) cGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGctct > 5:200891/1‑138 (MQ=255) cGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGctct > 8:263901/1‑138 (MQ=255) cGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGctct > 1:7325/1‑138 (MQ=255) cGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTg > 3:377807/1‑139 (MQ=255) cGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAAGAAACAGCTCTg > 1:236554/1‑139 (MQ=255) cGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAAATGTTCTTTCAAATAAACAGctct > 7:108707/1‑138 (MQ=255) cGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCGCGAGATGTTCTTTCATATAAACTGCGCTg > 2:191226/1‑139 (MQ=255) cGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCGTTGGTATCGTCATA‑TTTGCCAAAATTTGAATAGCGGCTGTTCCACGTTTCGGTTCATCGGCCGCCTGCTCTAGATGTTCTTTCAAATAAACAGatcgg > 5:395915/1‑137 (MQ=255) tataATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGa > 6:178070/1‑138 (MQ=255) tataATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGa > 7:148024/1‑138 (MQ=255) tataATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGa > 7:256612/1‑138 (MQ=255) tataATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGa > 8:1060/1‑138 (MQ=255) tataATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGa > 5:170064/1‑138 (MQ=255) tataATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGa > 5:15454/1‑138 (MQ=255) tataATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGa > 5:366267/1‑138 (MQ=255) ataATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGAc > 5:356092/1‑138 (MQ=255) aaTGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGgccgc > 7:280633/1‑100 (MQ=255) aaTGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGgccgc < 8:280633/100‑1 (MQ=255) aaTGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACaaa > 2:342869/1‑139 (MQ=255) aaTGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACaaa > 8:334479/1‑139 (MQ=255) tGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAAcc > 4:200442/1‑139 (MQ=255) aTTTCGTCTTCTTCCGTTATCACTGCGCCCTGTGGTATAGTCATA‑ATTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTAGTTTCATCGGCCCCGGGCTCTAGATGGTCTTTCAAATAAACAGAGATTACAAACCgg > 2:154063/1‑138 (MQ=255) tttCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGc < 2:208462/64‑1 (MQ=255) tttCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGc > 1:208462/1‑64 (MQ=255) cGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAgg < 1:365539/139‑1 (MQ=255) gTCTTCTTCCGTTATCCCTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAgg < 8:148024/138‑1 (MQ=255) gTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAACGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAgg < 8:354759/138‑1 (MQ=255) gTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAgg < 5:399786/138‑1 (MQ=255) tcttctTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTATATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCg < 8:108707/139‑1 (MQ=255) tcttctTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCg < 8:256612/139‑1 (MQ=255) tcttctTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCg < 6:135833/139‑1 (MQ=255) tcttctTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCGCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCg < 6:170064/139‑1 (MQ=255) tcttctTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCAAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCg < 8:335923/139‑1 (MQ=255) tcttctTCCGTAACAACTGCCCCCTTTGGTAGCGT‑ATATTTTGCCAAAATTTCAAACGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCg < 3:8670/139‑1 (MQ=255) tctgctTCCGTTACCAGTGCCCCCTTTGGTAGCGGAATA‑TTTCCAAAAATTTGAAACGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCg < 1:199496/139‑1 (MQ=255) cttcCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGgt < 5:164823/137‑1 (MQ=255) ttcCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTATTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGta > 1:200820/1‑139 (MQ=255) ccGTTATCCCTGCGCCCTTGGGGATCGTCATA‑TTTGCCAAAATTTGAAACGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGtat < 4:198967/138‑1 (MQ=255) ccGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGtat < 7:1060/138‑1 (MQ=255) ccGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGtat < 5:178070/138‑1 (MQ=255) ccGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGtat < 5:164534/138‑1 (MQ=255) ttATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTGTGACAAACCGGGAAGGCGGTGTATAATc > 7:96709/1‑139 (MQ=255) ttATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGtat < 2:50878/135‑1 (MQ=255) ttATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGtat > 1:50878/1‑135 (MQ=255) gcgcCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCt < 7:309593/87‑1 (MQ=255) gcgcCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCt > 8:309593/1‑87 (MQ=255) gcgcCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCgg > 1:545/1‑137 (MQ=255) ttGGTACCTTAATA‑TTTGCCAAAATTTAAAACGCGGCGGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCaa < 1:390252/138‑1 (MQ=255) tGGTTTCGTCATA‑TTTCCAAAAATTTTAATCGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTGCTTTCAAATAAACACCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAAc < 1:154063/138‑1 (MQ=255) tGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACa > 1:4486/1‑100 (MQ=255) tGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACa < 2:4486/100‑1 (MQ=255) tGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCaa < 7:263901/137‑1 (MQ=255) tGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAAc < 4:183639/138‑1 (MQ=255) tGGAATCGTCATA‑TTTGCAAAAATTTTAAACGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCaa < 2:172113/137‑1 (MQ=255) ggaaTCGTCATA‑TTTGCCAAAATTTCAAACGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAACa < 2:80199/135‑1 (MQ=255) ggTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAACa < 7:136123/138‑1 (MQ=255) ggTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAACa < 6:242527/138‑1 (MQ=255) cGTCATA‑TTTGCCAAAATTTTAAACGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAACAGTTCCt < 6:209393/139‑1 (MQ=255) tCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAACCCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAACAGTTCCt > 7:220011/1‑137 (MQ=255) ata‑tTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAACAGTTCCTAAGc > 5:285024/1‑139 (MQ=255) tttGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAACAGTTCCTAAGCCtt > 8:71469/1‑139 (MQ=255) tttGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAACAGTTCCTAAGCCt < 6:356092/138‑1 (MQ=255) ccAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAACAGTTCCTAAGCCTTGGc > 2:330506/1‑138 (MQ=255) aaaaTTCGAAACGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAACAGTTCCTAAGCCTTGGCCaa < 2:333567/139‑1 (MQ=255) aaaaGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAACAGTTCCTAAGCCTTGGCCAAAAGCAGa < 4:100503/138‑1 (MQ=255) aaaaGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAACAGTTCCTAAGCCTTGGCCAAAAGCAGa < 3:14926/138‑1 (MQ=255) aaaaGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAACAGTTCCTAAGCCTTGGCCAAAAGCAGa < 1:174705/138‑1 (MQ=255) | CCGATTGTCATAGTGGTGGAAATAGTAGTTTCCAGTTTCGTTGCACATCACGGAAGTATATTGCGTATAATGAATTTCGTCTTCTTCCGTTATCACTGCGCCCTTTGGTATCGTCATA‑TTTGCCAAAATTTGAAAAGCGGCTGTTACACCTTTCGTTTCATCGGCCGCCGGCTCTAGATGTTCTTTCAAATAAACAGCTCTGACAAACCGGGAAGGCGGTGTATAATCCCCCGGCAGACCAACAGTTCCTAAGCCTTGGCCAAAAGCAGA > CP006881/3880494‑3880763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |