| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,528,836 | C→A | 24.6% | intergenic (‑89/‑51) | U712_07870 ← / → U712_07875 | Uncharacterized protein ylbA/Uncharacterized protein ylbB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,528,836 | 0 | C | A | 24.6% | 231.8 / 26.5 | 147 | intergenic (‑89/‑51) | U712_07870/U712_07875 | Uncharacterized protein ylbA/Uncharacterized protein ylbB |
| Reads supporting (aligned to +/- strand): ref base C (57/49); new base A (4/34); total (61/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.25e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 147 total aligned reads displayed.
AGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGATAATGTATATGAAGCTGCAGTA > CP006881/1528701‑1528964 | aGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCaa < 6:67827/138‑1 (MQ=255) aaCCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAAtttt > 6:123785/1‑139 (MQ=255) cccTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTgac < 1:48193/139‑1 (MQ=255) ccTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTgac > 3:19539/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGGAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTgacga > 2:141645/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTgacga > 1:351898/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTgacga > 1:394870/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTgacga > 2:381298/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTgacga > 5:337886/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTgacga > 3:65790/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTgac < 7:213579/136‑1 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGAAAAAAT‑TAAATTTTgacga > 3:240280/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACATTTCCTGCCAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑AAAATTTTgacga > 6:300082/1‑138 (MQ=255) ttCAAGTACGCTTTCAGTAACCTTAAACACTGACACCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTgacga > 3:402886/1‑138 (MQ=255) gTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAg > 5:330577/1‑139 (MQ=255) cGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCAc < 7:377635/139‑1 (MQ=255) cGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCAc > 3:282138/1‑139 (MQ=255) cGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCAc < 5:108856/139‑1 (MQ=255) aGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCAc < 4:384977/132‑1 (MQ=255) aGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCAc > 3:384977/1‑132 (MQ=255) cacctacAACACCCACCCCTCCTTAAAAAAATACCCTTTCCTCAAAACAATCCTATCAAAGCGTTAAACTTTCAATGAATCTTATTATTTTCAAAGTATCCAAAAAT‑AAAATTTTCACGACAATAGCACTAGACTAAag < 2:398495/133‑1 (MQ=255) aCTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAag > 5:5792/1‑137 (MQ=255) cTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAaggag > 7:203045/1‑139 (MQ=255) cAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTaaa > 7:112857/1‑132 (MQ=255) cAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTaaa < 8:112857/132‑1 (MQ=255) cacTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTGTTTTGAAAGTATGCAAAAAT‑AAAATTTTGACGACAATAGCAATAGACTAAAGGAGGTTaa > 4:58887/1‑138 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 1:195809/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTATCCTGACAATCATAGTATGAAAGCCTAAAACTATCAATGAATCTTCTTCTTTTGATAGTATGCAAAAAT‑TAAAATATGACGACAATAGCACTAGACTAAAGGAGCTTAAACGGAt > 8:147533/1‑139 (MQ=255) tcctTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTATACTAAAGGAGGTTAAACGGATGACa > 3:132944/1‑138 (MQ=255) tcctTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACa > 1:92247/1‑138 (MQ=255) tcctTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGATAAAAT‑TAAATTTTGACGACAATAGCACAAGACTAAAGGAGGTTAAACTGATGTCa > 7:377084/1‑138 (MQ=255) tcctTATAAAAATTACCTTTCCTGACAATCAAAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACa > 5:215228/1‑138 (MQ=255) ctTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACaaa > 5:130884/1‑138 (MQ=255) ataAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAAt > 3:13603/1‑138 (MQ=255) aTTACCTTTCATTAAAATAATAGTATGAACGCGTTAAACTTTAAATGAATCTTCTTCTTTTGAAATTATGAAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGAt < 2:108930/139‑1 (MQ=255) ttACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCTAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGCCAAAAATAAAAGATc > 2:207351/1‑139 (MQ=255) tCCTTAAAATAATAGTTTTAACGCTTAAAACTTTCAATGATTTTTGTTCTTTTTAAAGTATTTAAAAAT‑TATATTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGTTCtgatga < 7:352475/138‑1 (MQ=255) ccTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCtgatga > 3:167021/1‑137 (MQ=255) ccTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCtgatga > 3:235577/1‑137 (MQ=255) cATAGTATGAAAGCGTTAAAATTTCAATGAATCTTCTTCTTTTGAAAGAATGCAAAAAA‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTg < 7:375057/139‑1 (MQ=255) tAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTATAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGc > 5:309867/1‑138 (MQ=255) tGAAAGCGTTAAACTTTCAACGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATAtt > 7:127677/1‑139 (MQ=255) attcGTTAAAATTTAATTTAATCTTATTATTTTTAAATAATTAAAAAAT‑TAAATTTTCACGACAATAGCACTAGACTAATGGTGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 2:346399/136‑1 (MQ=255) atgctttAAACTTTCAATGAATATTTTTCTTTTGAAATTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:167021/134‑1 (MQ=255) atgCGTTAAACTTTAAATGAATATTCTTCTTTTGAAAGTTTGAAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAATGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:139835/137‑1 (MQ=255) atgCGTTAAAATTTCATTGAATCATCTTATTTTGAATGTATGAAAAAAT‑TAAATTTTGAAGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:273386/137‑1 (MQ=255) atgCGTTAAAATTTAATTTAATTTTCTTCTTTTGAAAGTATGAAAAAAT‑AAATTTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:235577/137‑1 (MQ=255) acgctttAAACTTTCATTGAATCTTCTTCTTTTCAAATTATCCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 8:191994/134‑1 (MQ=255) acgCGTTAAAATTTCATTAAATCTTCTTCTTTTCAAAGTATGAAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:366582/137‑1 (MQ=255) accctttAAACTTTCAATCAATCTTCTTCTTTTGAAAGTATCCAAAAAT‑TAATTTTTGACGACAATAGCACTAGACTAATGGAGGTTAAACGGATTAAAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 3:264803/134‑1 (MQ=255) aatgtttAAACTTTCAATTAATCTCGTTTTTTTGAAA‑TATTGAAAAATAAAAATTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:240280/134‑1 (MQ=255) aatcGTTAAAATTTCAATAAATATTGTTATTTTTAAATTTTTAAAAAAA‑TAAATTTTGACGAATATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 8:218404/136‑1 (MQ=255) aaggtttAAACTATCAATGAATCTGCTTCTTTTGAAAGAATGCAAAAAT‑AAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:197620/134‑1 (MQ=255) aagatttAAAATTTAAATGAAGCTTCTTCTTTTGAACTTATTCAAAAAT‑TAAATTTTCACGACAATAGCACTAGACTAACGGAGGTTAAACGGATGACAAAAATAAACGATCTGATGACAGCCGACTTGCAATATTGCa < 2:19179/134‑1 (MQ=255) aaccGTTAAACTTTCAATCAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 1:12458/136‑1 (MQ=255) aaccGTAAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 7:137671/136‑1 (MQ=255) aaGGGTTAAACTTTCAATGAATCTTATTCTTTTTAAAGTATCAAAAAAT‑TAATTTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:278168/139‑1 (MQ=255) aaGCTTTAAACTTTCAATGAATATTCTTCTTTTGAAATTATGAAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAACCGACTTGCAATATTGCa < 4:162011/139‑1 (MQ=255) aaGCTTTAAAATTTAAATTAATTTTATTATTTTAAAATTATGAAAAAAT‑AAAATTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 2:394870/139‑1 (MQ=255) aaGCTTTAAAATTTAAATTAATCTTCTTATTTTTAAATTATGAAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 2:92247/139‑1 (MQ=255) aaGCTTTAAAATTTAAATGAATCTTATTATTTTTAAATTATGAAAAAAT‑AAAATTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:13864/139‑1 (MQ=255) aaGCTTAAAACTTTCAATTATTCTTCTTCTTTTTAAATAATCCAAAAAA‑TAATTTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 2:168208/139‑1 (MQ=255) aaGCGTTAATCTTTAAATAAATCTTCTTATTTTTAATTAATGAAAAAAT‑AAATTTTTGACGACAATAGCACTAGACTATAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:309867/139‑1 (MQ=255) aaGCGTTAAACTTTCATTTATTCTTATTCTTTTGAATCTATCCAAAAAA‑TAAATTTAGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 8:321973/139‑1 (MQ=255) aaGCGTTAAACTTTCAATTAATATTCTTATTTTTAAATTATGAAAAAAT‑TAAATTTTGACGACAATAGCACTATACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 8:153246/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTTAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 5:340899/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATTCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 3:351776/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:5792/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 2:232577/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 7:171508/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 8:375650/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 1:141645/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa > 5:292547/1‑139 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 8:203045/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 5:178187/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 5:292433/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 2:333598/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTATTCTTTTGAAAGTATGAAAAAAT‑AAAATTTTGACGACAATAGCACTAGACTAAAGGATGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:254866/139‑1 (MQ=255) aaGCGTTAAACTTTCAACGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 8:127677/139‑1 (MQ=255) aaGCGTTAAACTTTAAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:130884/139‑1 (MQ=255) aaGCGTTAAACTTAAAATGAATCTTCTTCTTTTGAAATTATGAAAAAAT‑AAAATTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 3:48889/139‑1 (MQ=255) aaGCGTTAAAATTTAAATTAATCTTCTTCTTTTTAAATTATGAAATATT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 5:24633/139‑1 (MQ=255) aaGCGTAAAATTTTAAATGAAAATTGTTTTTTTCAAATTATGAAAAATT‑AAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:35540/139‑1 (MQ=255) aaGCGATAATCTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAATTTTTGACGACATTAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 8:377084/139‑1 (MQ=255) aaGCGATAAACTTTCAATCATTCTTCTTCTTTTGAAAGTATCCAAAAAT‑TAAATTTGGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:204985/139‑1 (MQ=255) gCGTTAAACTTTCAATGAATCTTCTTATTTTTAAATTATCCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACg < 6:292547/139‑1 (MQ=255) ttAAACTTTCAATGTATCTTCTTCTTTTTAAATTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAATGGAGGTTAAACGTATGACAAAATTAAAAGATCTGATGACAGACGACTTGCAATATTGAACGGTa > 1:126517/1‑139 (MQ=255) ttAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa > 6:364636/1‑134 (MQ=255) ttAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 5:364636/134‑1 (MQ=255) ttAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTa > 1:346399/1‑139 (MQ=255) ttAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGAAAAAAT‑TAAATTTTGACTACAATAGCACTAGACTAAAGTAGGTTAAACGGATGACAAAAATAAAAGATCTTATGACATCAGACTTGCAATATTGCACGGTa > 4:48889/1‑139 (MQ=255) tttCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGAt < 4:282138/139‑1 (MQ=255) tCAATTAATCTTCTTATTTTGAAATTATTAAAAAAT‑TAAATTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGAt < 2:92257/137‑1 (MQ=255) tCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa > 5:307416/1‑126 (MQ=255) tCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 2:304566/126‑1 (MQ=255) tCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa > 1:304566/1‑126 (MQ=255) aatttaaTCTTTTTCTTTTGAAATTATTAAAAAAT‑TAATTTTGGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGATAAt < 4:13603/134‑1 (MQ=255) aaTTAATCTTCTTCTTTTTAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGATAAt < 6:316575/138‑1 (MQ=255) aaTGAATCTTTTTTTTTTTAAATTTTTAAAAAAT‑TAATTTTTGAAGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACATAAGACTTGCAATATTGCACGGTATTAGTTAAt < 6:211188/138‑1 (MQ=255) gAAAGTATCCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGATAATGTATATGAAGCTGCAGTa < 7:135278/138‑1 (MQ=255) | AGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAT‑TAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGATAATGTATATGAAGCTGCAGTA > CP006881/1528701‑1528964 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |