| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 125,619 | C→T | 100% | R21C (CGT→TGT) | U712_00560 → | DNA‑directed RNA polymerase subunit beta' |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 125,619 | 0 | C | T | 100.0% | 273.4 / NA | 80 | R21C (CGT→TGT) | U712_00560 | DNA‑directed RNA polymerase subunit beta' |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (42/38); total (42/38) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
ACAAAAGAATAATCTCTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTGGGAATGTCATTGCGGG > CP006881/125486‑125747 | aCAAAAGAATAATCTCTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCa < 7:113577/139‑1 (MQ=255)aCAAAAGAATAATCTCTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCa < 7:4602/139‑1 (MQ=255)aCAAAAGAATAATCTCTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCa < 3:109746/139‑1 (MQ=255) aaaGAATAATCTCTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCa < 5:116680/136‑1 (MQ=255) aaaGAATAATCTCTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCa > 6:116680/1‑136 (MQ=255) aaaGAATAATCTCTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATgg > 7:269702/1‑139 (MQ=255) aaaGAATAATCTCTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATgg > 2:165349/1‑139 (MQ=255) aGAATAATCTCTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTc > 6:107098/1‑139 (MQ=255) ctctcTAGTTATAAAGGCAAGGGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTgg < 6:393737/138‑1 (MQ=255) tctcTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGgt > 3:187483/1‑139 (MQ=255) tctcTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGgt > 7:132742/1‑139 (MQ=255) tctcTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGgt > 5:356203/1‑139 (MQ=255) gTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGgtgaa < 5:207216/136‑1 (MQ=255) ggCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTCTTCATGGTCTTTTGGTGAAGTGAAAAAGcc > 1:182560/1‑139 (MQ=255) gCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGATGTGAAAAAGCCt > 2:391416/1‑139 (MQ=255) aaGTGTCATCGTTTAATCCGTAGATAAAAAGGGAGGTATGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGa < 2:398147/139‑1 (MQ=255) aGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGa > 5:383754/1‑138 (MQ=255) gTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGaaa < 8:132742/139‑1 (MQ=255) gTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGaaa < 6:356203/139‑1 (MQ=255) aCATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACg < 4:157545/138‑1 (MQ=255) aTCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATa < 3:180032/139‑1 (MQ=255) aTCGGTTAATCCGAAGATAAAAAGGGAGGCAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGAt > 2:33031/1‑138 (MQ=255) tCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATa > 5:5556/1‑138 (MQ=255) tCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATa > 1:387704/1‑138 (MQ=255) aTCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCg < 6:5556/139‑1 (MQ=255) cggAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTa > 7:354383/3‑139 (MQ=255) ccGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTa > 3:279943/1‑139 (MQ=255) aaGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAATAAGCCTGAAACGATAAACTATCGTACGt > 3:350666/1‑139 (MQ=255) aaGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACAAGATAAAATCTGTTCAGGGTCTTTTGGTGATGTGAAAAAGCCTGAATCGATAAACTATCGTACGt > 8:115003/1‑139 (MQ=255) aGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGt > 5:251474/1‑138 (MQ=255) tAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTaaa < 6:251474/139‑1 (MQ=255) aaaaGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAAc < 1:222584/139‑1 (MQ=255) aGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGaa > 1:59982/1‑137 (MQ=255) gcaGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAgg < 1:33031/137‑1 (MQ=255) gTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAgg < 5:107098/139‑1 (MQ=255) gTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAgg < 3:133480/139‑1 (MQ=255) cccccTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGTTATTGCTTCACAAGATAAAAACTGTTCATGGTCTTTTGGTTAAGTGAAAAAGCATGAAACGATAAAATATCTTACTTTAAAACATGAAAAGGACgg > 3:72487/2‑139 (MQ=255) ccccTTGCTAGATGTGAAGAATTTTGAGTATATGAACATCGGTATTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGt < 2:38564/139‑1 (MQ=255) cTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTa > 7:306010/1‑139 (MQ=255) ttGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTAt > 2:107150/1‑139 (MQ=255) tGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTAtt > 1:264390/1‑139 (MQ=255) tGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTAtt > 2:113319/1‑139 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGaaa > 2:344517/1‑75 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGaaa < 1:344517/75‑1 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTaa > 6:94515/1‑106 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTaa < 5:94515/106‑1 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCa > 3:300940/1‑139 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCa > 7:344556/1‑139 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCa > 4:65153/1‑139 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTCAAAAAGCCTGAAACGATAACCTATCGTACGTTAAACCCTGAAAAGTACGGACTATTCTGCGAACGCa > 2:362946/1‑139 (MQ=255) ttttGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATa < 7:167459/85‑1 (MQ=255) ttttGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATa > 8:167459/1‑85 (MQ=255) gAGTATATGAACATCGGGCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGa < 4:332818/138‑1 (MQ=255) aGTTTATGAACATCGGTCTTGCATCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAc < 2:182560/138‑1 (MQ=255) aGTATATGACCATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAc < 7:213463/138‑1 (MQ=255) aGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGATACGATAAACTATCGTACGTTAAAACCTGAATCGGACGGTCTATTCTGCGAACGCATTTTCGGAc < 2:387704/138‑1 (MQ=255) aGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAATCCTGATAAGGACGGTCTATTCTGCGAACGCATTTTCGTAc < 4:279943/138‑1 (MQ=255) aGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAcc > 1:242847/1‑139 (MQ=255) aGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAc < 8:354383/138‑1 (MQ=255) aGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAc < 1:113319/138‑1 (MQ=255) aGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAc < 4:300940/138‑1 (MQ=255) aGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAc < 8:269702/138‑1 (MQ=255) tatGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACt < 8:384801/139‑1 (MQ=255) atGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAATCCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACt < 4:187483/138‑1 (MQ=255) atGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACt > 7:105253/1‑138 (MQ=255) cATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGAc < 1:107150/139‑1 (MQ=255) cATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGAc > 1:154496/1‑139 (MQ=255) tCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAATgg > 2:10418/1‑96 (MQ=255) tCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAATgg < 1:10418/96‑1 (MQ=255) tCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACg < 4:370934/115‑1 (MQ=255) tCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACg > 3:370934/1‑115 (MQ=255) ggTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTgg > 2:66665/1‑138 (MQ=255) gTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACt < 6:284991/128‑1 (MQ=255) gTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACt > 5:284991/1‑128 (MQ=255) gTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGa > 6:286204/1‑133 (MQ=255) gTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGa < 5:286204/133‑1 (MQ=255) aCCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTGGGAATGTCATTGc > 6:207738/1‑139 (MQ=255) aGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTGGGAATGTCATTGCtgg < 4:72487/139‑1 (MQ=255) aTAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTGGGAATGTCATTGCggg > 5:246144/1‑137 (MQ=255) aTAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTGGGAATGTCATTGCggg > 4:144182/1‑137 (MQ=255) | ACAAAAGAATAATCTCTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTGGGAATGTCATTGCGGG > CP006881/125486‑125747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |