| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 2,529,732 | T→C | 5.5% | E122G (GAG→GGG) | U712_12985 ← | Uncharacterized protein yrkH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,529,732 | 0 | T | C | 5.5% | 221.9 / 3.4 | 73 | E122G (GAG→GGG) | U712_12985 | Uncharacterized protein yrkH |
| Reads supporting (aligned to +/- strand): ref base T (35/34); new base C (2/2); total (37/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.09e-01 | |||||||||||
TGCACCCTTCCCCTTCGCAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGAAAGCATTTCGGATACCATGACGGATGAACCTTCTTTT > CP006881/2529602‑2529869 | tGCACCCTTCCCCTTCGCAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGc > 1:381880/1‑137 (MQ=255)tGCACCCTTCCCCTTCGCAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCa > 1:232873/1‑139 (MQ=255) gCACCCTTCCCCTTCGCAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCAt > 5:162938/1‑139 (MQ=255) gCACCCTTCCCCTTCGCAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCAt > 1:237564/1‑139 (MQ=255) ttccccttcGCAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTTCCGATTCGAACAAACTGATACCTCCCACCGCCAGAtttt > 6:259008/1‑138 (MQ=255) tccccttcGCAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTa > 8:357496/1‑138 (MQ=255) ccccttcGCAAAATATATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAAAAAACTGATACATCTCACCGCCATCTTTTa < 5:186247/137‑1 (MQ=255) ttcGCAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACAACTCACCGCCAACTTTTAAATccc > 1:202257/1‑139 (MQ=255) cGCAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATcccc > 3:52347/1‑138 (MQ=255) cGCAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCg > 2:332197/1‑139 (MQ=255) cGCAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCg > 2:25812/1‑139 (MQ=255) cGCAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCg > 6:276181/1‑139 (MQ=255) cGCAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCACCCTTTACCGATTCGAACAAACTGATACATCTCAACGCCAGCATTTAAATCCCCg > 5:228485/1‑139 (MQ=255) cGCAAAATCTATAAAGAAATACACCATACGTGTCGCATCAATAATTGCTGCTACACCATAGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATATCACCGCCCACTTTTAAAAcccag > 3:312148/1‑137 (MQ=255) cAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTGCCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCg > 4:165611/1‑137 (MQ=255) cAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTGCCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCg < 3:165611/137‑1 (MQ=255) cAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCCCACCGCCATCTTTTAAATCCCCGAc > 6:126072/1‑139 (MQ=255) taAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTAcc < 4:1595/137‑1 (MQ=255) taAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTAcc < 6:162938/137‑1 (MQ=255) aaaTTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTa < 2:232873/139‑1 (MQ=255) aaaTTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTa < 8:249030/139‑1 (MQ=255) aTTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTAc < 8:344198/129‑1 (MQ=255) aTTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTAc > 7:344198/1‑129 (MQ=255) aCCATACGTGTCGCATCAATAATTGCTGGTTGAGCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGTCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGtt < 4:312148/139‑1 (MQ=255) tACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCt < 1:332197/139‑1 (MQ=255) tACGTGTCGCATCAATAATTGCTGCTTCACAATTGGAAATGACCATTTATGACAATCAGCCTTTACCGATTCGAACAAACTGATACATCTGACCGACATCTTTTAAATCGCAGACTTTTACATGATCTAAATGtactct > 3:214188/1‑134 (MQ=255) aCGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTc > 8:235140/1‑139 (MQ=255) gtgtCGCATCAATAATTGCTGCTTCACCATTGGAAGTGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCa < 7:178217/139‑1 (MQ=255) gtgtCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCa < 8:165960/139‑1 (MQ=255) tCGCATCAATAAATGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTAACGGCTCTAAATGTTCGCTCCATGc > 1:18316/1‑139 (MQ=255) ataatTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTc < 8:260696/139‑1 (MQ=255) ataatTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTc < 5:161355/139‑1 (MQ=255) taatTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTcc < 8:314562/139‑1 (MQ=255) taatTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTcc < 4:52347/139‑1 (MQ=255) ctgctTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCt < 2:237564/138‑1 (MQ=255) gctTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCa < 6:404660/119‑1 (MQ=255) gctTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCa > 5:404660/1‑119 (MQ=255) ctTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTa < 4:285914/137‑1 (MQ=255) ctTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCCCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTa < 5:259008/137‑1 (MQ=255) aCCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTa < 5:276181/138‑1 (MQ=255) cATTGGACATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCCCCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGa < 2:154609/139‑1 (MQ=255) aTTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCCCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGAt < 5:126072/139‑1 (MQ=255) tgAAATGACCATGTATGACAAGCAGCCTTTACCGATTCTAACAAACTGATACATCTCACCGCCATCTATTAAATCCCCGACTTTTACCCGCTCTAAATGTTCCCTCCATCCTTTAATTACACCGAAAAGGTAGAATAct > 2:388545/2‑138 (MQ=255) ggAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCttt > 5:251690/1‑114 (MQ=255) ggAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCttt < 6:251690/114‑1 (MQ=255) aaTGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCt > 6:371779/1‑109 (MQ=255) aaTGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCt < 5:371779/109‑1 (MQ=255) gcccATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTa > 8:309158/3‑121 (MQ=255) gACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCTCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGa > 2:393881/1‑139 (MQ=255) gACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTa < 7:309158/121‑1 (MQ=255) gACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGa > 2:327797/1‑139 (MQ=255) gACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGa > 4:240637/1‑139 (MQ=255) tGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGc > 3:16553/1‑139 (MQ=255) tGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGc > 7:265861/1‑139 (MQ=255) gACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCtt > 1:163928/1‑136 (MQ=255) aCAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACATGCTTCAg > 2:193129/1‑138 (MQ=255) aaGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGaaa < 7:357496/139‑1 (MQ=255) aaGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGa > 6:191561/1‑137 (MQ=255) agcagcCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGAAAg < 8:265861/139‑1 (MQ=255) gcagcCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGAAAg > 1:46770/1‑138 (MQ=255) gcCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGAAAGCAtt < 1:390941/139‑1 (MQ=255) ccTTTACCGATTCGAACAAACTGATACATCTCTCCGCCAGCTTTTAACTCCCCTACTTTTTCCGGCTCTATATGTTCGCTCCATGCTTTCATTCCACCCGTAAGGTAGGATACACAATGACCTGCTTCAGAAAGCAttt > 1:62121/1‑139 (MQ=255) tACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGAAAGCATTTCgg < 3:332523/138‑1 (MQ=255) aCCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGTATACAGAATGACCTGCTTCAGAAAGCATTTCGGa < 5:191561/138‑1 (MQ=255) ttCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGAAAGCATTTCGGATACCAt > 6:178107/1‑139 (MQ=255) ttCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGAAAGCATTTCGGATACCAt < 3:240637/139‑1 (MQ=255) cAAACAGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTAGCGGCTCTAAATGTTCGCTCGATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGAAAGCATTTCGGATACCATGACGGa < 6:228485/139‑1 (MQ=255) aaaCTGATACATCTCACCGCCATCTTTTATATCCCCGACTTTTACCGGGTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGAAAGCATTTCGGATACCATGACGGAt < 2:18316/139‑1 (MQ=255) aaaCTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGAAAGCATTTCGGATACCATGACGGAt < 1:393881/139‑1 (MQ=255) aaaCTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGAAAGCATTTCGGATACCATGACGGAt < 3:353682/139‑1 (MQ=255) tACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGAAAGCATTTCGGATACCATGACGGATGAACctt > 8:37068/1‑139 (MQ=255) aTCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTc < 7:268542/67‑1 (MQ=255) aTCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTc > 8:268542/1‑67 (MQ=255) ctcACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGaaa > 6:313116/1‑104 (MQ=255) ctcACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGaaa < 5:313116/104‑1 (MQ=255) ctcACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGAAAGCATTTCGGATACCATGACGGATGAACCTTCtttt > 2:365887/1‑139 (MQ=255) | TGCACCCTTCCCCTTCGCAAAATCTATAAAGAAATTCACCATACGTGTCGCATCAATAATTGCTGCTTCACCATTGGAAATGACCATGTATGACAAGCAGCCTTTACCGATTCGAACAAACTGATACATCTCACCGCCATCTTTTAAATCCCCGACTTTTACCGGCTCTAAATGTTCGCTCCATGCTTTCATTCCACCCTTAAGGTAGGATACAGAATGACCTGCTTCAGAAAGCATTTCGGATACCATGACGGATGAACCTTCTTTT > CP006881/2529602‑2529869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |