| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 2,888,105 | G→T | 13.5% | T385K (ACA→AAA) | U712_14900 ← | Putative transporter ythQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,888,105 | 0 | G | T | 13.5% | 181.2 / 3.7 | 75 | T385K (ACA→AAA) | U712_14900 | Putative transporter ythQ |
| Reads supporting (aligned to +/- strand): ref base G (19/44); new base T (10/2); total (29/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.56e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTGTAAAAGCGGCGCGGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGCCCGATAATATTCATCACTTTCCTTATCGGTGCCAATTAAAAAAGGGGCATC > CP006881/2887970‑2888238 | ttgaacaaGCGGCGCGGGGAACAGGGAGCGCGCTTCATCCGCTCGGCCTCGGCTTCGCCATTCTGGTATT‑CATCCAGCTCGATATCTTATAAGGATAGACCAAAAAACACAAACG‑TCACC‑GGTTGGGTTTTTTATGTaa < 8:2328/133‑1 (MQ=255)ttGTAAACGCGGCGCGGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCTCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAATGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTaa < 1:47063/139‑1 (MQ=255)ttGTAAACGCGGCGCGGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTaa < 4:220674/139‑1 (MQ=255)ttGTAAAAGCGGCGCGGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTaa < 8:3424/139‑1 (MQ=255) tAAAAGCGGCGCGGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTtaaa > 7:374458/1‑137 (MQ=255) tAAAAGCGGCGCGGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAAc < 4:228797/138‑1 (MQ=255) aaaGCGGCGCGGGGAAAATGGAGAGAGATTCATCCCCTCGTCATCGTTTTCTCCATTCTGTTTTT‑CATCCAGCTGTTTTGTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTATTTTAATTAAACaa > 8:14563/1‑138 (MQ=255) aaGCGGCGCGGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTATGTTTTT‑CATACAGCTGGTTATTTTATAATGATAGACCAAAAAACCCAAACG‑AAGAC‑GTTTGGGTTTTTTTTTTaaaaaaa > 2:83923/1‑137 (MQ=255) gcggcgCGGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATaa > 8:81737/1‑138 (MQ=255) gcggcgCGGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGGTTTCGCAATTCTGTTTTT‑CAACCAGCTGTTTATTTTATAAGGAAAGACCAAAAAACCCAAAAC‑ACCCC‑GATTGGGGTTTTGATTTAaaaaaaaa > 2:47063/1‑138 (MQ=255) ggcgCGGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTTTGTTAAAAATAAag > 6:400376/1‑138 (MQ=255) ggcgCGGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑ACGCC‑GTTTGGGTGGTTTATGTAAACTATAAag > 1:228815/1‑138 (MQ=255) gcgcGGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTTTGTTATCAATAAagag > 1:131086/1‑139 (MQ=255) cgcgGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATTAGGATATACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGGTTTTTTTGTTAAAAATAAAaaga > 2:109388/1‑139 (MQ=255) cgGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TTGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACa > 2:296566/1‑139 (MQ=255) cgGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATATTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTTGGTTTTTTAATTAAACAAAAAATAGAc > 4:146213/1‑138 (MQ=255) ggAGATAGATTCATCCGCTCGTCATGGTTTTCGCCATTGTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAAAAAAGAGACAGCGGCCGCTa < 4:168662/139‑1 (MQ=255) gagagaTTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTTTTTTATATGGATAGACCAAAAATCCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTATAGAATAAAGAGAAAGCGGACGCTaaa > 2:262983/1‑138 (MQ=255) gagagaTTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTaaa > 6:161988/1‑138 (MQ=255) gagaTTCATCCGCTCGTCATCGTTTTCGCCATTATGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGAACAAAAAACCCAAAAG‑TCGCC‑GTTTGGGTTTTTAATTTAAACAATAAACAAACAGCGGCCACTaaaaa > 8:172972/1‑138 (MQ=255) ttCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAATGATAGACCAAAAAACCCAAAAC‑TCGCCGGTGTGGGTTTTTTTTTTAAA‑AAAAAAGAGACAACAGCCCCAAAAAaaaaac > 1:206879/1‑139 (MQ=255) ttCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAaacaa > 8:268223/1‑138 (MQ=255) tCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAggc < 1:74990/139‑1 (MQ=255) gCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GGTGGGGTTTTTTTTGTTAACAATAAAGTGACAGCCGCCGCGAAAAAAAAACCggcggc > 2:249204/1‑139 (MQ=255) ggcATCGTTTTCGCCATTCTGTTTTT‑CAACCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAACCG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCaa < 8:83104/135‑1 (MQ=255) gTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCaa < 3:97981/137‑1 (MQ=255) atgtttttCGCCATTCTGTTTTT‑AATCAAGCTGTTTATTTAAAAAGTATAGACAAAAAAACCAAAACG‑TCGCC‑TTTTGGGTTTTTTATGTAAACAATAAATAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa < 8:394531/135‑1 (MQ=255) atggTTTTGCCCATTATTTTTTT‑CATCGAGTTGTTTTTTTTATAATGTTAGACCAAAAAACCAAAACG‑TCGCA‑TTTTTTGTTTTTTATGTAAACAATAAAGTGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa < 4:142878/136‑1 (MQ=255) accGTTTTCGCAATTATGTTTTT‑AATCCAGCTGTTTATTTTATAAGCAAATAACAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa < 1:229967/137‑1 (MQ=255) aTCGTTTTCGCCATTGAGTTTTT‑GATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGCCAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa < 4:249591/139‑1 (MQ=255) aTCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCTAACG‑TCGCC‑GTTTGGGTTTTTTATTTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACgaa < 7:14563/139‑3 (MQ=255) aTCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa < 7:132664/139‑1 (MQ=255) aTCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa < 8:192374/139‑1 (MQ=255) aTCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa < 1:7651/139‑1 (MQ=255) aTCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa < 4:276757/139‑1 (MQ=255) aTCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa < 5:358090/139‑1 (MQ=255) aTCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑GCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGTCAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa < 3:111173/139‑1 (MQ=255) aTCGTTTTCGCCATTATTTTTTT‑CATCCAGCTGTTTATTTTAAAAGGATAGACCAAAAACCCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa < 7:172972/139‑1 (MQ=255) tCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTATTAAGGATATACCAAAAACCCCAACCG‑GCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGTGACCGCGGCCGCTAAAAAACAACAGGCGGCAAACGCAt < 2:228815/139‑1 (MQ=255) ccGTTTTCGCCATTCTGTTTTT‑AATCCAGCTGTTTATTTTATAAGGATACACCAAAAAACCCCAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCAt < 1:109388/138‑1 (MQ=255) gtgtttCGCCATTTTTTTTTTACATCCTGTTTTTTTTTTAATATGTAAACA‑AAAAAAACCAAAATGTTCGCG‑TTTTGGTTTTTTTTTTAAAACAAAAAATACACCGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa < 2:206879/135‑1 (MQ=255) cGTTTTCGACATTCTGTTTTT‑CATCCAGCTGTTTTTTTTATAAGTATAGACAAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCAt < 8:374458/138‑1 (MQ=255) gTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATa < 7:84065/138‑1 (MQ=255) tCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTGTGGGGTTTTTTTGTTAAAAAAAAAAATAAAACGGCCGCTAAAAAAAAAAACGCGGCAAACCCAAAGTg > 7:394531/1‑137 (MQ=255) gCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAg < 4:301344/138‑1 (MQ=255) ttCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGt < 3:292862/139‑1 (MQ=255) ttttt‑CATCCTGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATa < 3:146213/139‑1 (MQ=255) ttttt‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TTGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATa < 1:296566/139‑1 (MQ=255) ttttt‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCGAAAAAAAAACCCGCGGCAAACGCATAGTGCAGGTTGTTGATa > 2:59975/1‑139 (MQ=255) tttt‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATTTAAACAAAAAAGAGAAAGCGGCCGCGAAAAAAACACACGCGGCCAACCCAAAATGGCGGTAGTTGATa > 2:227174/1‑138 (MQ=255) cATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTTGGTTTTTTATTTATAAAATAAAAAGCACGCGGCCGCGAAAAAAAAACACGCGGCAAAACCCAAGTGGAGGATGTTTATACacca > 8:343988/1‑136 (MQ=255) cATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATTTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa > 5:91054/1‑116 (MQ=255) cATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGATACAGCCGCCGCTAAAAAACAACAGGCGGCAAACCCATATTGCAGGATGTTGATACAGca > 8:235793/1‑138 (MQ=255) cATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa < 6:91054/116‑1 (MQ=255) aGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTTTTTAAACAATAAATAGACAGCCGCCGCTAAAAAACAACAGGCCGCAAACGCATAGTGCAGGATGTTGGAACAGCgtttta > 7:190137/1‑138 (MQ=255) tttattttatAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGcc < 7:81737/139‑1 (MQ=255) ttattttatAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGATACAGCGGCCGATAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGcc < 1:83923/138‑1 (MQ=255) tttatAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATa < 6:154889/103‑1 (MQ=255) tttatAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATa > 5:154889/1‑103 (MQ=255) tttatAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATa < 2:251748/103‑1 (MQ=255) tttatAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATa > 1:251748/1‑103 (MQ=255) ttatAAGGATAGACCAAACAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGCCCGata < 8:190137/138‑1 (MQ=255) ttatAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGCCCGata < 7:268223/138‑1 (MQ=255) aTAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa < 7:112014/92‑1 (MQ=255) aTAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAAAAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCa > 8:112014/1‑92 (MQ=255) gACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGCCCGATAATATTCATCACt < 2:84594/139‑1 (MQ=255) gACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGCCCGATAATATTCATCACt < 1:4485/139‑1 (MQ=255) aaaaCCCAAACG‑TCGCC‑GTGTGGGGTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGCCCGATAATATTCATCACTTTCCt > 7:87012/1‑138 (MQ=255) aCG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGCCCGATAATATTCATCACTTTCCTTATGGGTGcc < 3:250804/139‑1 (MQ=255) ggTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGCCCGATAATATTCATCACTTTCCTTATCGGTGCCAATTAAAAAAggg < 1:227174/139‑1 (MQ=255) ggTTTTTTATGTAAACAATAAAGAGACAGAGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGCCCGATAATATTCATCACTTTCCTTATCGGTGCCAATTAAAAAAggg < 8:214075/139‑1 (MQ=255) gTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGCCCGATAATATTCATCACTTTCCTTATCGGTGCCAATTAAAAAAgggg < 5:161988/139‑1 (MQ=255) gTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGCCCGATAATATTCATCACTTTCCTTATCGGTGCCAATTAAAAAAgggg < 2:302239/139‑1 (MQ=255) gTTTTTTATGTAAACAATAAAGAGACAGCGGCAGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGCCCGATAATATTCATCACTTTCCTTATCGGTGCCAATTAAAAAAgggg < 3:366188/139‑1 (MQ=255) tttATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGCCCGATAATATTCATCACTTTCCTTATCGGTGCCAATTAAAAAAGGGGCATc > 3:218136/1‑139 (MQ=255) | TTGTAAAAGCGGCGCGGGGAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTTTT‑CATCCAGCTGTTTATTTTATAAGGATAGACCAAAAAACCCAAACG‑TCGCC‑GTTTGGGTTTTTTATGTAAACAATAAAGAGACAGCGGCCGCTAAAAAACAACAGGCGGCAAACGCATAGTGCAGGATGTTGATACAGCTTTTTCTGGCCCGATAATATTCATCACTTTCCTTATCGGTGCCAATTAAAAAAGGGGCATC > CP006881/2887970‑2888238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |