| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,066,215 | C→A | 5.4% | T588T (ACC→ACA) | U712_15740 → | Na(+)/H(+) antiporter subunit A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,066,215 | 0 | C | A | 5.4% | 245.7 / 3.5 | 74 | T588T (ACC→ACA) | U712_15740 | Na(+)/H(+) antiporter subunit A |
| Reads supporting (aligned to +/- strand): ref base C (36/34); new base A (2/2); total (38/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.27e-01 | |||||||||||
AATTGGTTATTTGTCGCTGAATAAGTGGAAAGGAATCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCATGGCTAAAATCGGTGTATACGAAATCATTTTGACG > CP006881/3066077‑3066353 | aaTTGGTTATTTGTCGCTGAATAAGTGGAAAGGAATCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGTTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGAcc < 4:195862/139‑1 (MQ=255)aaTTGGTTATTTGTCGCTGAATAAGTGGAAAGGAATCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGAcc < 7:77756/139‑1 (MQ=255) ttGGTTATTTGTCGCTGAATAAGTGGAAAGGAATCTATAATCTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCgg > 4:157411/1‑139 (MQ=255) gTCGCTGAATAAGTGGAAAGGAATCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAag < 3:268745/138‑1 (MQ=255) gCTGAATAAGTGGAAAGGAATCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCTGGTTTTTAag > 5:59860/1‑135 (MQ=255) gCTGAATAAGTGGAAAGGAATCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAag < 6:59860/135‑1 (MQ=255) aTAAGTGGAAAGGAATCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGattatt < 5:378976/138‑1 (MQ=255) tAAGTGGAAAGGAATCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTg < 8:46044/139‑1 (MQ=255) tAAGTGGAAAGGAATCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTg < 8:224360/139‑1 (MQ=255) tGGAAAGGAATCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGGTAATACGATAAGCGTTTGACTATGAGGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGt < 1:374484/139‑1 (MQ=255) gAAAGGAATCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAag > 8:217201/1‑123 (MQ=255) gAAAGGAATCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAag < 7:217201/123‑1 (MQ=255) aaGGAATCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTatat < 3:20671/139‑1 (MQ=255) aTCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCg < 7:270693/139‑1 (MQ=255) tCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGc > 7:310426/1‑139 (MQ=255) ataAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTatat > 1:111189/1‑130 (MQ=255) ataAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTatat < 2:111189/130‑1 (MQ=255) taAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTgg < 8:310426/138‑1 (MQ=255) aaCTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGttt < 3:49491/139‑1 (MQ=255) tttCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAag > 2:265369/1‑104 (MQ=255) tttCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAag < 4:266678/104‑1 (MQ=255) tttCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAag > 3:266678/1‑104 (MQ=255) tttCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAag < 1:265369/104‑1 (MQ=255) tttCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACAGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTtcatca > 5:387625/1‑139 (MQ=255) tttCCATCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTtcatca < 5:64980/139‑1 (MQ=255) ttCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTcatcat > 7:242432/1‑139 (MQ=255) ttCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTcatcat > 5:298097/1‑139 (MQ=255) ttCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTcatcat > 5:345528/1‑139 (MQ=255) gAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGTGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGAt < 6:373754/138‑1 (MQ=255) aaCCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCtttt < 6:298097/138‑1 (MQ=255) aaCCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTg > 5:84423/1‑139 (MQ=255) aaCCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGCATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTg < 6:335410/139‑1 (MQ=255) ccGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGc > 7:364148/1‑138 (MQ=255) ggTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCAt > 4:155842/1‑139 (MQ=255) ttATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCAtt > 6:360764/1‑138 (MQ=255) aCGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAag > 2:10246/1‑73 (MQ=255) aCGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAag < 1:10246/73‑1 (MQ=255) aCGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAag < 3:51323/73‑1 (MQ=255) aCGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAag > 4:51323/1‑73 (MQ=255) aCGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACAGGGTTTTTAag < 5:214593/73‑1 (MQ=255) aCGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACAGGGTTTTTAag < 5:219947/73‑1 (MQ=255) aCGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACAGGGTTTTTAag > 6:214593/1‑73 (MQ=255) aCGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACAGGGTTTTTAag > 6:219947/1‑73 (MQ=255) tAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGta < 7:148493/84‑1 (MQ=255) tAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGta > 8:148493/1‑84 (MQ=255) tAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGa > 8:10076/1‑139 (MQ=255) aaGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAagag > 7:301415/1‑70 (MQ=255) aaGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAagag < 8:301415/70‑1 (MQ=255) aGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGAtt > 6:107294/1‑139 (MQ=255) aGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGAtt > 3:57200/1‑139 (MQ=255) aGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGAtt > 2:6692/1‑139 (MQ=255) tgatgGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGattatt < 3:171370/63‑1 (MQ=255) tgatgGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGattatt > 4:171370/1‑63 (MQ=255) tgatgGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTtca > 6:324568/1‑87 (MQ=255) tgatgGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTtca < 5:324568/87‑1 (MQ=255) tgatgGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAAc > 7:282251/1‑139 (MQ=255) tgatgGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAAc > 8:156198/1‑139 (MQ=255) tgatgGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAAc > 3:278863/1‑139 (MQ=255) tgatgGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAAc > 7:105623/1‑139 (MQ=255) tgatgGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAAc > 1:70123/1‑139 (MQ=255) atgGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACgg < 8:242432/139‑1 (MQ=255) gataGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGc < 3:62203/136‑1 (MQ=255) aaaGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCa > 8:251888/1‑139 (MQ=255) aaaGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCa < 3:155842/139‑1 (MQ=255) ctTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCATGGCTa > 3:139731/1‑138 (MQ=255) cgcggTCAGATAACAATAGATGTACGGGTTTTTAAGAGATTATTAGCTGGATATCTTCGCTGGTTTCACGAGTCTGATATGCGGAGCTTTTCCAATTAAAGGCGGATTTTAATTTAAAACGGAAGTCATGGCTAAAAt < 2:148256/135‑1 (MQ=255) ccGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCATGGCTAAAAt < 4:139731/138‑1 (MQ=255) ccGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCATGGCTAAAAt < 5:360764/138‑1 (MQ=255) ccGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCATGGCTAAAAt < 8:364148/138‑1 (MQ=255) ggTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGc < 6:380637/124‑1 (MQ=255) ggTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGc > 5:380637/1‑124 (MQ=255) ggTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCATGGCTAAAATCGgt > 6:175120/1‑139 (MQ=255) gTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTCCTGTATATCTTCGCTGCTTTCATCATTCTGATAGGCGCAGCATTTGCCATTAAAGGCGGATTTTCATTTAAATCGGAAGGCATGGCTAAAATCGctg > 7:274240/1‑139 (MQ=255) cAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCATGGCTAAAATCGGTGTATACGaaa < 4:168843/139‑1 (MQ=255) cAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCATGGCTAAAATCGGTGTATACGaaa < 5:107294/139‑1 (MQ=255) tatatGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCATGGCTAAAATCGGTGTATACGAAATCa > 6:259667/1‑139 (MQ=255) ccGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCATGGCTAAAATCGGTGTATACGAAATCATTTTGAc < 7:49959/139‑1 (MQ=255) cGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCATGGCTAAAAt < 7:398368/114‑1 (MQ=255) cGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCATGGCTAAAAt > 8:398368/1‑114 (MQ=255) cGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCATGGCTAAAATCGGTGTATACGAAATCATTTTGACg > 7:47968/1‑139 (MQ=255) | AATTGGTTATTTGTCGCTGAATAAGTGGAAAGGAATCTATAAACTGTTTCCTTCGAAACTCACACTCAACCGGTTATACGATAAGCTTTTGACTATGATGGAGAAAGGCTCTTACCGGGTCACAAAACAATATATGACCGGGTTTTTAAGAGATTATTTGCTGTATATCTTCGCTGGTTTCATCATTCTGATAGGCGGAGCTTTTGCCATTAAAGGCGGATTTTCATTTAAAACGGAAGGCATGGCTAAAATCGGTGTATACGAAATCATTTTGACG > CP006881/3066077‑3066353 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |