| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,905,563 | G→T | 19.6% | D86Y (GAT→TAT) | U712_20135 → | Uncharacterized protein yxcD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,905,563 | 0 | G | T | 19.6% | 106.0 / 3.6 | 80 | D86Y (GAT→TAT) | U712_20135 | Uncharacterized protein yxcD |
| Reads supporting (aligned to +/- strand): ref base G (34/26); new base T (10/8); total (44/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAGGGTTCTTCGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTT > CP006881/3905426‑3905693 | cAGGGTTCTTCGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTg > 8:236130/1‑138 (MQ=255)cAGGGTTCTTCGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGa > 6:139787/1‑139 (MQ=255) ttcttcGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAg > 4:315967/1‑138 (MQ=255) ttcttcGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAg > 4:28822/1‑138 (MQ=255) cttcGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTTATAAGaa > 7:61388/1‑138 (MQ=255) ttcGCTGAAGCTACATTTGGCCTGCACCCCAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTGGAAGTGCAATTTGATAAGaaa > 1:304389/1‑138 (MQ=255) cATTTGGCCTGCACAACAAGCAGCTAATGTCAGATGCCAGTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACACCTTCAGTCCTGACGTTCCCGTAGTCGCATTTGATATTTATAACGAAAAAGGCATCTCCGc > 2:272937/1‑139 (MQ=255) tGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAAATGAAATTTTATAATAAAAAAAGCTTCTACGCCttt > 6:11255/1‑138 (MQ=255) gCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCATGGt > 7:55988/1‑139 (MQ=255) gCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCGTGGttttt > 7:292861/1‑139 (MQ=255) gCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTGGAATTGCAATTTTATAATAAAAAAGGATTCTCAGCCTTGGttttt > 5:244141/1‑139 (MQ=255) caccacAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGGAATTTGATTAGAAAAAAGGCTTCTCCGCCTTGGGTTTTg > 1:333999/1‑139 (MQ=255) caccacAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAATAAAAAAGGGTTCTCCGCCTTGGGTTTTg > 5:208998/1‑139 (MQ=255) caccacAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTg > 5:152338/1‑139 (MQ=255) caAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTATCCGCCTTGGTTTTTGTAAAc > 8:259574/1‑139 (MQ=255) aaGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACg < 5:135354/139‑1 (MQ=255) agcTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGc > 1:40181/1‑139 (MQ=255) cTTTTGTCAGATGACAATTAAGAAGGCATTATTCAGTTCTTAGAGGAATACAACAACTTAAATCCGGACGTTACCGTCGTTGAATTGCAATTTCATAACAAAAAACGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCag < 8:148486/139‑1 (MQ=255) cTTATGTCATATTAATTTTCAGAAGGCATTATTCAGTTCTTAGAGTAATACCACAACTTCAATCCGGACGTTACGGTCGTTGAATTTAAATTTTAAAATAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCag < 6:244141/139‑1 (MQ=255) cTTATGTCAGATGACATTTCAGAAGGCATTATTCCGTTCTTAGCGCAATCCCACAACTTCAATCCGGCCGTTACCGTCGTGGAATTGCAATTTTATACGAAAAACGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCag < 8:292861/139‑1 (MQ=255) cTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCag < 3:131077/139‑1 (MQ=255) cTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCag < 7:236130/139‑1 (MQ=255) aTGTCAGATGACATTTCAGAAGGCATTATTCATTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACTGTCGTTGAATTGCAATTTTATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCag < 1:28228/136‑1 (MQ=255) tGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTTCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCagaag > 6:130410/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTTCAATTTGATAAGAAAAAAGGCTTCTCCGCCt > 5:328736/1‑108 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATa > 3:100919/1‑87 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATa < 4:100919/87‑1 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTGAACGAAGCAGAAGAATaaa > 3:317117/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATaaaa < 7:207315/139‑1 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATaaa > 4:315723/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATaaa > 1:177666/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATaaa > 7:101269/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAACAAAAAAGGCTTCTCCGCCt < 6:328736/108‑1 (MQ=255) cATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATg > 2:13284/1‑138 (MQ=255) aTTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCGGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTc < 3:315967/139‑1 (MQ=255) aTTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTTATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGCAGCAGAAGAATAAAAATTTc > 5:326728/1‑139 (MQ=255) aGAAGGAATTTTGCAGTTCTACCCGTAAAACCACAACTTCATTCCGGTGGTAACCGTGGTTGAATTGAAATTTGTTAAGAAAAAAGGCTTCTCCGCCTTGG‑TTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 8:294573/139‑1 (MQ=255) gAAGGCATTATTCATTTCTTAGAGGAATACCACAACTTCAATCCGTACTTTACCGTCGTTGAATTGAAATTTGATAATAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 3:235665/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGTGGAAAACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTTATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 4:139383/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 8:101269/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 3:315723/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGGCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 5:139787/139‑1 (MQ=255) gCATTATTCAGTTCTTAGAGGAATACCACAAATTCAATCCGGACGTTACAGTCGTTCAATTGCAATTTTATAATAAAAAAGGCTTCTCCGACATGTGTTTTGTGAACGAAGCAGAAAAATAAAAATGTCTTAATAAAAc > 2:267137/1‑139 (MQ=255) aGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTTCAATTTTATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc > 1:25887/1‑126 (MQ=255) aGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 2:25887/126‑1 (MQ=255) aGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcg < 6:152338/139‑1 (MQ=255) aGTTCTTAGAGCAATACCACAACTTCAATCCGTACGTTCCCGGCGTTTAATTGCAATTTCATAAGAAAAACCGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcg < 8:55988/139‑1 (MQ=255) gTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCGTCTCCGCCTTGGGTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATAAAACCTTACTCcgc > 5:89886/1‑139 (MQ=255) ttCTTAGAGTAATACCACAACTTCAAGCCGGACGTTACCGTCGTTGAATTGCAATTTTATAAGAAAAACGGCTTCTCCGCCTTGGTTGTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgcg < 5:130410/139‑1 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGGATTGGAATTTTAAAAAAAAAAAAGCGTATCCGCCGTGGTTTTTGTAAAAGAAGGAGAAGAAAAAAAATTTGATAATAAAACCTTACTccag > 1:306477/1‑136 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAATGCGTCTCCGCCGTGGTTTTTTTCAACGAAGCAGAAGAATAAAAATTTCTTAATAAAACCATACTCcgcg > 2:281748/1‑139 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCt > 5:247207/1‑82 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCt < 6:247207/82‑1 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTATTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgcg > 8:9715/1‑139 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCGTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgcg > 3:18076/1‑139 (MQ=255) ttCTTAGAGGAATACCACAACTTACATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAACAAAAACCGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgcg < 2:68862/139‑1 (MQ=255) ttCTTAGAGCAATACCACAACTTCAATCCGGACGTTACCGTCGTTCAATTGCAATTTGATAAGAAAAACGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgcg < 1:281748/139‑1 (MQ=255) tCTTACAGTAATACCACAAATTCAATCGGGACTTTACCGTCGTTGAATTGCAATTTTATAAGAAAAAACGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgcg < 5:11255/138‑1 (MQ=255) agagGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATAAAACCTTACTCCGCGCggg > 7:118829/1‑138 (MQ=255) agGAATACCACAACTTCAATCCGGACTTTACCGTGGTTTAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTa < 8:284844/138‑1 (MQ=255) aaTCCCAAAACTTCAATCCGGCCGTTACCGTCGTTGAATTGCAATTTTATAACAAAAACCGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGt < 4:317117/139‑1 (MQ=255) aaTACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGt > 5:127019/1‑139 (MQ=255) aaTACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCGTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGt > 6:230135/1‑139 (MQ=255) aaTACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAAATTGATTAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAAAGTCTTAATAAAACCTTACACCGCGCGGGGAAGGt > 7:284844/1‑139 (MQ=255) aTACCACAACTTCAATCCGGACGTTACCGTCTTTTAATTGAATTTTTAAAATAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGt < 8:118829/138‑1 (MQ=255) aTACAACAACTTCATTCCGGACGTTACAGTCGTTGAATTTCAATTTGATAAGAAAAATCGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAATATTAAAAATGTCTTAATCAATCCTTACTCCGCTCGGGTAAGGt < 8:56027/138‑1 (MQ=255) tACCACAACTTCAATCCGGACGTTACCGTCGTTGTATTGCAAATTTATAATAAAAAATGCTTCTCCGCCGTGGTTTTTTTGAACGGAGCAGAAGAATAAAAAAGTATTAAAAAAACCTTAATACTCCCGGGTAATGttt > 4:39633/1‑139 (MQ=255) aCCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTTATAAGAAAAAAGGCTTATCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGtttt > 4:151357/1‑139 (MQ=255) acaACTTCATCCCGGACGTAACCGTCTTTGAATTGCAATTTGATAATAAAAAACGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGttttttt < 1:326658/139‑1 (MQ=255) acaACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTATTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGttttttt < 7:9715/139‑1 (MQ=255) caACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTATTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGttttttt > 3:166965/1‑138 (MQ=255) cTTCAATCCGGACGTTACCGTCGTTGAATTGGAATTTGATAATAAAAAAGGCTTATGCGGCGTGGTTTTTGTGAACGAAGCAGCAGAATAAAAATGTGTTAATAAAAACGTAAGCCGCGCGGGTAAGGTTTTTTTattt > 3:191715/1‑136 (MQ=255) cTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATg > 8:152886/1‑139 (MQ=255) cTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATg > 2:44319/1‑139 (MQ=255) cAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCGTGGTTTTTGTCAACGCAGCCGAAGAATAAAAATGTGTTAATCAAAACTTACTCCGCGCGGGGAAGGTTTTTTTAAttggt > 5:184910/1‑135 (MQ=255) cGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTctct < 7:152886/139‑1 (MQ=255) cGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTctct < 6:66455/139‑1 (MQ=255) gTTACCGTCGTTTAATTGAAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCa < 8:61388/139‑1 (MQ=255) aTTGCAATTTGATAACAAAAACGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGt < 6:217794/139‑1 (MQ=255) ttGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGtt > 5:263034/1‑139 (MQ=255) gaattttGAAAATAAAAACGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGttt < 4:191715/134‑1 (MQ=255) | CAGGGTTCTTCGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTT > CP006881/3905426‑3905693 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |