| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,291,215 | G→T | 5.3% | V328V (GTG→GTT) | U712_06550 → | Phage‑like element PBSX protein xkdE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,291,215 | 0 | G | T | 5.3% | 224.0 / 4.2 | 75 | V328V (GTG→GTT) | U712_06550 | Phage‑like element PBSX protein xkdE |
| Reads supporting (aligned to +/- strand): ref base G (26/45); new base T (2/2); total (28/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.46e-02 | |||||||||||
CTTACCGGGAGCTGCAGGAATACATGAATGATCTTGAAGGCGTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCGCTGTATACAGGCGAGGCCCAGG > CP006881/1291079‑1291339 | cttACCGGGAGCTGCAGGAATACATGAATGATCTTGAAGGCGTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTgg > 5:5642/1‑138 (MQ=255)cttACCGGGAGCTGCAGGAATACATGAATGATCTTGAAGGCGTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTgg > 5:140608/1‑138 (MQ=255) gAGCTGCAGGAATACATGAATGATCTTGAAGGCGTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGaaatcaaat > 4:307013/1‑139 (MQ=255) gCTGCAGGAATACATGAATGATCTTGAAGGCGTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCt < 5:37741/139‑1 (MQ=255) gAATACATGAATGATCTTGAAGGCGTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTg < 1:96941/139‑1 (MQ=255) cATGAATGATCTTGAAGGCGTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCttt > 8:128204/1‑129 (MQ=255) cATGAATGATCTTGAAGGCGTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCttt < 7:128204/129‑1 (MQ=255) cATGAATGATCTTGAAGGCGTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAAtt > 3:111072/1‑139 (MQ=255) agaTCTTGAAGGCGTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGAGATTACGCCCGTTTCCGAGGAAATCAAATCTTTGGCTGAAATTCTCCa > 8:187983/2‑138 (MQ=255) aTCTTGAAGGCGTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCaaaa > 6:331140/1‑139 (MQ=255) tCTTGAAGGCGTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCAACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAac > 1:287030/1‑139 (MQ=255) ttGAAGGCGTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAacga > 5:209966/1‑139 (MQ=255) gAAGGCGTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAacgacg > 4:38700/1‑139 (MQ=255) gTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGt < 6:5642/139‑1 (MQ=255) gTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGt < 5:300796/139‑1 (MQ=255) gTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGt < 5:299059/139‑1 (MQ=255) gTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGt < 4:111072/139‑1 (MQ=255) tGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGtt < 3:307013/139‑1 (MQ=255) cGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGaa > 3:60000/1‑139 (MQ=255) gCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGaa > 2:69130/1‑138 (MQ=255) ccATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATAc > 4:240485/1‑139 (MQ=255) tAAATTTCTCCTGATCGAAGCGGTAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGAt > 6:204974/1‑139 (MQ=255) tAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGAt > 2:4408/1‑139 (MQ=255) tAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGAt > 6:70552/1‑139 (MQ=255) ctcCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGaaaa > 5:273979/1‑137 (MQ=255) cTGATCGAAGCGGAATGAATCGCAAAAGAAAAGTATCTCAACGGAGGCGAGTATATTACGCCGGTTTACGTGGAAATAAAATCTTTGGCTGAAATTCTCCAAAACTACGCCTTGTTTCTTGAATACGATGAAAAAAg < 1:205830/137‑1 (MQ=255) aTCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCGTTGTTTCTTGAATACGATGAAAAAAGCAGa > 5:311801/1‑138 (MQ=255) aTCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGa < 1:4408/138‑1 (MQ=255) aTCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGa > 4:228458/1‑138 (MQ=255) aTCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGa < 5:70552/138‑1 (MQ=255) gAAGCGGAAGGAATCGCAAAAGAAAAGGAGCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAAt < 2:211639/138‑1 (MQ=255) aGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTTGAAATCAAATCTTTGGCTGAAATTCTCCAAAacg > 4:177688/1‑98 (MQ=255) aGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTTGAAATCAAATCTTTGGCTGAAATTCTCCAAAacg < 3:173456/98‑1 (MQ=255) aGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTTGAAATCAAATCTTTGGCTGAAATTCTCCAAAacg < 3:177688/98‑1 (MQ=255) aGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTTGAAATCAAATCTTTGGCTGAAATTCTCCAAAacg > 4:173456/1‑98 (MQ=255) aGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAg < 3:228458/139‑1 (MQ=255) gaaTCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTgcgtt < 4:318974/138‑1 (MQ=255) aTCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTgcgttccg > 7:102200/1‑139 (MQ=255) tCGCAAAAGAAAAGGATCTCCACCGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATAAAATCTTTGGCTGAAATTATCCAAAACGACGCCGTGTTTCTTGAATACGCTTAAAAAAGCAGAAATAAGCTgcgttccgc > 6:46420/1‑139 (MQ=255) cAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTgcgttccgcgtt < 8:212935/139‑1 (MQ=255) agGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTccc < 7:200595/139‑1 (MQ=255) ggATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTcccc < 3:79092/139‑1 (MQ=255) ggATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTcccc < 1:69130/139‑1 (MQ=255) ggATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCATGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTcccc < 8:164486/139‑1 (MQ=255) gctcCACGGTGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 1:324284/138‑1 (MQ=255) gctcCACGGAGGCTAGGATCTTACGCCGGTTGCCTTGGAAATCAAATCTTAGGCTGAAATTCTCCAACACGACGCCTGGTTGCTTGAATACGAGGAAAACCGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 8:97106/138‑1 (MQ=255) ctcCACGGAGGTGAGGATATTACGCCGGTTTGGGTGTAAATCAAATCTTTGGCTGAAATTCTACAAAACGACGGCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 2:287030/138‑1 (MQ=255) ctcCACGGAGGCGAGGATTTTACTCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 4:308611/138‑1 (MQ=255) ctcCACGGAGGCGAGGATATTACGCCGTTTTCGGTGTAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 5:46420/138‑1 (MQ=255) ctcCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 5:204974/138‑1 (MQ=255) tcCACGGCGGCGAGGATATTACGCCGGGTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAACCGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 4:202423/137‑1 (MQ=255) cACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTTGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 6:140608/135‑1 (MQ=255) cACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 6:38166/135‑1 (MQ=255) cACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 5:331140/135‑1 (MQ=255) cACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 7:105546/135‑1 (MQ=255) cACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 3:38700/135‑1 (MQ=255) cACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 5:63590/135‑1 (MQ=255) cACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 5:56650/135‑1 (MQ=255) cACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCGCt < 8:156101/137‑1 (MQ=255) cACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCGGAAATTGTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 7:187983/135‑1 (MQ=255) cACGGAGGCGAGGATATTACGCCGGGTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCGCt < 5:324/137‑1 (MQ=255) cGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCGCTGTATACAGGc < 6:209966/139‑1 (MQ=255) cGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCGCTGTATACAGGc < 4:60000/139‑1 (MQ=255) aGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTgcgtt > 2:57537/1‑105 (MQ=255) aGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTgcgtt < 1:57537/105‑1 (MQ=255) aGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 4:27678/125‑1 (MQ=255) aGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg > 3:27678/1‑125 (MQ=255) aGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCGCTGTATACAGGc > 1:58769/1‑137 (MQ=255) ttACGCCGGTTTCCGTGTAAATCAAATCTTTGGAAGAAATGCTCCAAAACGACGCATTGTGTCTTGAATACGATGAAAAAAGCAGTAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCGCTGTATACAGGCGAGGccc < 3:239087/138‑1 (MQ=255) ttACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCGCTGTATACAGGCGAGGccc < 8:111851/138‑1 (MQ=255) ttACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCGCTGTATACAGGCGAGGccc < 8:102200/138‑1 (MQ=255) tACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCGCTGTATACAGGCGAGGCCCAg > 1:29278/1‑139 (MQ=255) cGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCGCTGTATACCGGCGAGGCCCAgg > 8:273105/1‑138 (MQ=255) ccGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg > 6:9644/1‑114 (MQ=255) ccGGTGTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCg < 5:9644/114‑1 (MQ=255) ttCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTcccc > 2:49195/1‑106 (MQ=255) ttCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTcccc < 1:49195/106‑1 (MQ=255) | CTTACCGGGAGCTGCAGGAATACATGAATGATCTTGAAGGCGTGGAGAACGCCCATAAATTTCTCCTGATCGAAGCGGAAGGAATCGCAAAAGAAAAGGATCTCCACGGAGGCGAGGATATTACGCCGGTTTCCGTGGAAATCAAATCTTTGGCTGAAATTCTCCAAAACGACGCCTTGTTTCTTGAATACGATGAAAAAAGCAGAAATAAGCTGCGTTCCGCGTTCCGTCTCCCCCCGCTGTATACAGGCGAGGCCCAGG > CP006881/1291079‑1291339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |