| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,528,836 | C→A | 17.9% | intergenic (‑89/‑51) | U712_07870 ← / → U712_07875 | Uncharacterized protein ylbA/Uncharacterized protein ylbB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,528,836 | 0 | C | A | 17.9% | 204.5 / 10.9 | 108 | intergenic (‑89/‑51) | U712_07870/U712_07875 | Uncharacterized protein ylbA/Uncharacterized protein ylbB |
| Reads supporting (aligned to +/- strand): ref base C (39/47); new base A (3/19); total (42/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.83e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 108 total aligned reads displayed.
ACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGATAATGTATATGAAG > CP006881/1528713‑1528956 | aCCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAAtttt > 3:38634/1‑138 (MQ=255)aCCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAAtttt > 8:206822/1‑138 (MQ=255)aCCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTg > 7:135200/1‑139 (MQ=255) agctgcAAGTCCGCTTTCTGTAAACTTCAAAACTGACGCATCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATCATTCTTCTTCTTTTGAATTTATGCAAAATTTAAATTTTgac < 2:181369/134‑1 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAATGTATTCAAAAATTAAATTTTgacga > 5:304978/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 2:203279/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 3:20436/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 3:143879/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 5:31899/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 3:103903/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 4:333841/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 2:281347/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 7:7414/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 4:217452/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 1:90545/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGAAAAAATTAAATTTTgacga > 7:8958/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCACTCCTTATAAAAATTACCTATCCTGACAATCATAGAATGAAAGCGTTAAACTTTCAATTAATATTCTGCTTTTGAAAGTTTGCAAAAATTAAATTTTgacta > 1:299588/1‑136 (MQ=255) aaGTCCGCTTTCAGTAAACTTCAACACTTACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGAAAAAATTAAATTTTGACGACaa < 3:310205/138‑1 (MQ=255) ccGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCa < 7:46865/139‑1 (MQ=255) cGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCAc < 5:108256/139‑1 (MQ=255) cGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCAc < 3:135546/139‑1 (MQ=255) cGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTATTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCAc < 5:116976/139‑1 (MQ=255) cGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTACCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCAc < 8:130758/139‑1 (MQ=255) cGCTTTCAGTAAACTTCAACACTGACCCCTCATTATAAAAATTACCTTTCCTGACAATCATAGTATTAAAGCGTTAAAATTTAAATTAATCTTCTTCTTTTGAAAGTATGAAAAAATTAAATTTTGACGACAATAGCAc < 1:203279/139‑1 (MQ=255) cTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCAc > 3:66502/1‑137 (MQ=255) cTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCAc > 4:255872/1‑137 (MQ=255) cTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGAAcct > 1:181369/1‑137 (MQ=255) cTTTCAGTAAACTTCAACACTGACCCCTCCTAATAAAAATTACCTTTCCTGACAATCATAGTATCAAAGCGATAAACATTCAATGAATATTCTTCTTTTGAAAGTATGAAAAAAATAAAATTAGACGACAAAATCAcct > 3:164276/1‑137 (MQ=255) tAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTATTTTTAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTaaa < 5:117302/139‑1 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGa > 8:328092/1‑119 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGa < 7:328092/119‑1 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 4:312153/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 1:305971/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 1:244895/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 8:33538/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGAACTAGACTAAAGGAGGTTAAACGGAt > 5:119043/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCAGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 5:240220/1‑139 (MQ=255) aCCCCTCCTAATAAAAATTACCTTTCATTACAATCATAGTATGAAAGCGTTAAAATTTCAATGAATCTTCTTCTTTTGAAAGTATGAAAAAATTAAATTTTGAATACAATAGCACTAGACTAAAGGAGGTTAAACGGa > 6:246362/1‑138 (MQ=255) cctcctTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGAc < 6:142685/139‑1 (MQ=255) tccgTATAAAAATTACCTTTCCTGACAAGCATAGTATGAACGCGTGAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAATAATTAAATTTTGACTACAATAGCACTAGACTAAAGGAGGTTAACCGGCTGACa > 4:178077/1‑138 (MQ=255) taAAAATTACGTTTCCTTACAATAATAGTATGAAAGCTTTAAACTTTCATTGAATATTCTTTTTTTGAAAGTATTCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATaa < 7:184679/139‑1 (MQ=255) taAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATaa < 1:222294/139‑1 (MQ=255) ttACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAGAAATAAAAGATc > 2:201268/1‑139 (MQ=255) cTTTCTTGACAATCATAGAAGGAAAGCGATAAAGTTTCAATGAATCTTTTTCTTTTTAACTTAACCAAAAATTAATTTTTGACCAAAATAGCACTAGACTAAAGGCGGTTAACCGGATGACAAAAATAAAAGATCtgat < 8:59131/139‑1 (MQ=255) ccTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCtgatga > 5:232693/1‑137 (MQ=255) aaaaTCATTGTATGAAAGCGTTAAAATTTAAATTAATCTTTTTTTTTTGAAAGTTTGAAAAATTTAAATTTGGACGACAATAGCACTAGACTAAAGGAGGTTAACCGGATGACAAAAATAAAAGATCTGATGACAGc < 2:218270/135‑1 (MQ=255) aCAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCg < 3:312153/139‑1 (MQ=255) atatTATTAATGCTTTAAACTTTAAATTAATCTTCTTCTTTTGAAATTATGAAAAAATTAATTTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTg < 2:244895/138‑1 (MQ=255) tAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCa < 3:333841/139‑1 (MQ=255) tGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATAtt > 3:140914/1‑139 (MQ=255) tGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATAtt > 4:45770/1‑139 (MQ=255) ccgctttAAACATACAATTCATCTTTTTGTTTTGAAATTATCAAAAAATTAAATTTGCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAATATCTGATGACAGCCGACTTGCAATATTGCa < 2:61918/134‑1 (MQ=255) atgtgTTAAACTTTAAATTAATTTTATTCTTTTGAATTTAAGCAAAAATTAATTTTTGACGACAATAGCACTAGACTAAAGGAGGGTAAACGGATGACAAAAATAAACGATCTGATGACAGCCGACTTGCAATATTGCa < 2:274224/135‑1 (MQ=255) atcggTTAAAGTTTCATTGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGCTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:103903/135‑1 (MQ=255) atcctttAAAATTTAAATTAATATTCTTATTTTAAAAGTATGAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 5:174655/134‑1 (MQ=255) actcGTTAAACTTTCAATTAATCTTCTTATTTTGAAATTATCAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGATGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:304978/136‑1 (MQ=255) acgctttAAACTTTCAATTATTGTACTTATTTTTAAATTAAGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 3:217452/134‑1 (MQ=255) acgctatAAACTTTCAATTAATTTTCTTCTTTTCAAAGTTTTCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 5:21308/133‑1 (MQ=255) acgCGTAAAAATTACAATGAATCTTCTGCTTTTGAAAGTATGAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:45440/137‑1 (MQ=255) aagctatAAAATTTCAATGAATCTTATTCTTTTTAAATTATGAAAAAATTAATTTTTGACGACAATAGCACTAGAATAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 8:31081/133‑1 (MQ=255) aaGGGTAAAACTTTCAATTAATGTTTTTATTTTCAATGTATCCAAAAATAAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:31899/139‑1 (MQ=255) aaGCTTTAAACTTTCAATCAATCTTCTTCTTTTCAAAGTATCCAAAAATTAAATTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 5:205913/139‑1 (MQ=255) aaGCTTTAAACTTTAAATGAATCTTCTTCTTTTGAAAGTATCAAAAAATTAAATTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:66502/139‑1 (MQ=255) aaGCGTTAAACTTTCAATTAATCTTCTTCTTTTGAAAGTATGAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 2:182182/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTTTTATTTTGAATGTATGAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:119043/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTTAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 2:12223/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 5:299556/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 7:274372/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 5:61920/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa > 4:116973/1‑139 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 7:33538/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:240220/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 2:90545/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:126121/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAAATAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 8:28953/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 3:255872/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATATTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 7:274369/139‑1 (MQ=255) aaGCGTTAAACTTTCAATCAATCTTTTTCTTTTGAAAGTATTAAAATATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 2:117017/139‑1 (MQ=255) aaGCGTTAAACTTTAAATTAATCTTTTTCTTTTCAAATAAACCAAAAATAAAATTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 3:268102/139‑1 (MQ=255) aaGCGTTAAACTTTAAATTAATCTTCTTCTTTTTAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:232693/139‑1 (MQ=255) aaGCGTAAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 1:123952/139‑1 (MQ=255) aaGCGTAAAACTTTCAATGAATCTTCTTCTTTTGAAAGAATGCAAAAATTAATTTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:147024/139‑1 (MQ=255) accgatAAACTTTCAATTAATCTTCTTCTTTTGAAATAATGAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCAc < 1:281347/134‑1 (MQ=255) cGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACgg > 7:31081/1‑139 (MQ=255) ttAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTa > 8:150777/1‑139 (MQ=255) taaaaCTTTCAATGAATATTCTGCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTa < 6:113092/137‑1 (MQ=255) tAATCTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTa < 8:235125/138‑1 (MQ=255) aCTTACAATTAATATTCTTATTTTTAAATTATGAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAg < 8:135200/139‑1 (MQ=255) cgaacaatcaatCATCTTCTTTTGACAGTATCCCAAACTTAAATATAGACCACAACAGCACTAGACTAAACGCGGTTAAACGTATGACAAAAATAAAACATCTGATGACAGCCGACTTGCAATAATGCACGGTATTAGa < 6:270652/135‑1 (MQ=255) cTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGa < 4:20436/139‑1 (MQ=255) cTTTAAATTAATCTTCTTCTTTTGAAATTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGAACTGATGACAGCCGACTTGCAATATTGCACGGTATTAGa < 7:214289/139‑1 (MQ=255) atttAAATGATTATTCTTCTTTTCAAAGTATTCAAATATTAAATTTTGACGACAATAGCACTAGATTAAATGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGa < 7:265368/138‑1 (MQ=255) aattCAATGAAGCTTCTTGTTTTCAAATTATGAAAAAATTAAATTATGACGAAAATATCACTAGACTAAAGGATGTTAAACGGATGAAAAAAATAAAAGATCTGCTGACAGCCGACTTGCAATATTGCACTGTATTAGa < 1:78882/137‑1 (MQ=255) tccaatcaatCTAATTCTATTCAATTAATCCAAAAATTAAATTTTGACGACAATCCCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGATa < 7:295830/137‑1 (MQ=255) tCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTTACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGAtct > 1:129968/1‑137 (MQ=255) aaTGAATCTTATTCTTTTTAAATTATTAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGATAAt < 4:277728/138‑1 (MQ=255) ttcttcttTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGATAATGTATATg > 3:277728/1‑137 (MQ=255) cttattTTTAAATTATCAAAAATTTAATTTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACTAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGATAATGTATATGAAg < 5:304305/138‑1 (MQ=255) tGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:106862/99‑1 (MQ=255) tGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa > 3:106862/1‑99 (MQ=255) | ACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGATAATGTATATGAAG > CP006881/1528713‑1528956 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |