| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 84,430 | Δ1 bp | 7.4% | coding (141/585 nt) | U712_00385 → | Para‑aminobenzoate/anthranilate synthase glutamine amidotransferase component II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 84,430 | 0 | G | . | 7.4% | 186.1 / 7.8 | 54 | coding (141/585 nt) | U712_00385 | Para‑aminobenzoate/anthranilate synthase glutamine amidotransferase component II |
| Reads supporting (aligned to +/- strand): ref base G (25/25); new base . (2/2); total (27/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATTTTAATGATTGATAACTACGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCGGACATCAGTCCATCGCACAAGTGTTCGGTGGTGA > CP006881/84293‑84564 | aTTTTAATGATTGATAACTACGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCtga < 4:103048/139‑1 (MQ=255)aTTTTAATGATTGATAACTACGATTCATTCACGTACAACGTGGTACAGTATTTGGGCGAGCTTGGGGATGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCtga > 1:5782/1‑139 (MQ=255) taTGATTGATAACTACGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 5:54682/137‑1 (MQ=255) aaTGTTTGATTACTACGATGCAATCACGTACAACTTGGGACAGTATTTGGGCGATCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 8:138958/138‑1 (MQ=255) aaTGATTGATTACTAAGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 4:21963/138‑1 (MQ=255) aaTGATTGATCACTACGATTCATTCACGTACATGTTGGTTCAGTATTTGGGCGAGCTGGGGGTAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 6:54447/138‑1 (MQ=255) aaTGATTGATAACTACGATTCATTCACGTACAACTTGGTTCAGTATTTGGGCGAGCTTGGGGAAGATCTGGTTGTGAAACTCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 6:134249/138‑1 (MQ=255) aaTGATTGATAACTACGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 8:46681/138‑1 (MQ=255) aaTGATTGATAACTACGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 4:38951/138‑1 (MQ=255) aaTGATTGATAACTACGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 6:159902/138‑1 (MQ=255) aaTGATTGATAACTACGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 4:203563/138‑1 (MQ=255) aaTGATTGATAACTACGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 4:114396/138‑1 (MQ=255) aaTGATTGATAACTACGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 6:40658/138‑1 (MQ=255) aaTGATTGATAACTACGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 2:94710/138‑1 (MQ=255) aaTGATTGATAACTACGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 2:69207/138‑1 (MQ=255) aaTGATTGATAACTACGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 7:62377/138‑1 (MQ=255) aaTGATTGATAACTACGATTCATTCACGTACAACTTGGGACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 6:4939/138‑1 (MQ=255) aaTGATTGATAACTACGATTCATTCAAGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGGTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 2:177093/138‑1 (MQ=255) ctgagtgatAACTACGATTCATTCCCGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGata < 5:24503/137‑1 (MQ=255) aTGATTGATAACTACGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGatat < 6:44874/139‑1 (MQ=255) tAACTACGCATCATTCACGTACCACATGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGCGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCGCCGGACTTTCTGATGATATCTCCCGGa < 6:161147/139‑1 (MQ=255) tAACTACGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGa < 3:236721/139‑1 (MQ=255) tAACTACGAGTCATTCACGTACAACTGGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGa < 7:187893/139‑1 (MQ=255) aCGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 3:16946/124‑1 (MQ=255) aCGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat > 4:16946/1‑124 (MQ=255) aCGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTg > 4:107111/1‑139 (MQ=255) cGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat > 1:36451/1‑123 (MQ=255) cGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 2:36451/123‑1 (MQ=255) cGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 6:291011/123‑1 (MQ=255) cGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat > 5:291011/1‑123 (MQ=255) cGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTg < 5:108055/138‑1 (MQ=255) attcattcACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAg > 6:167602/1‑139 (MQ=255) cTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat > 4:86019/1‑105 (MQ=255) cTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 3:86019/105‑1 (MQ=255) tGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGata < 1:90910/104‑1 (MQ=255) tGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGata > 2:90910/1‑104 (MQ=255) tGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGata > 8:29789/1‑104 (MQ=255) tGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGata < 7:29789/104‑1 (MQ=255) ggTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAAt > 5:209604/1‑138 (MQ=255) ggTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTC‑‑ATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAg > 7:127753/1‑139 (MQ=255) ggTACAGTATTTGGGCGAGATTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTC‑‑ATGATATCTCACGTACCGTGCAGCCATGATGAGGAGGGAATCAg > 7:123864/1‑139 (MQ=255) tATTTTGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGatat < 1:5517/97‑1 (MQ=255) tATTTTGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGatat > 2:5517/1‑97 (MQ=255) tATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGTCGGGAATCAGCCTc > 1:74335/1‑138 (MQ=255) tATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTc > 1:233353/1‑138 (MQ=255) tATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGAGCAGCCCTGATGAGGCGGGAATCAGCCTc > 6:102897/1‑138 (MQ=255) tttGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCg < 1:262685/124‑1 (MQ=255) tttGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCg > 2:262685/1‑124 (MQ=255) tttGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGa < 6:135973/138‑1 (MQ=255) gggCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGCTGAGGCGGGAATCAGCCTCGAAGc > 5:82652/1‑138 (MQ=255) gggCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGc > 1:211742/1‑138 (MQ=255) gAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATc < 4:58702/123‑1 (MQ=255) gAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATc > 3:58702/1‑123 (MQ=255) aGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGa < 3:289276/95‑1 (MQ=255) aGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGa > 4:289276/1‑95 (MQ=255) aGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTa > 5:2818/1‑138 (MQ=255) aGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGCGAATCAGCCTCGAAGCAATTa > 5:28033/1‑138 (MQ=255) agCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat > 3:161986/1‑73 (MQ=255) agCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 4:161986/73‑1 (MQ=255) gTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGaaaa > 7:284462/1‑139 (MQ=255) gTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGaaaa > 3:252512/1‑139 (MQ=255) gTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGaaaa > 5:171533/1‑139 (MQ=255) gCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat < 5:204105/58‑1 (MQ=255) gCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTgatgat > 6:204105/1‑58 (MQ=255) tGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGgt > 5:164351/1‑139 (MQ=255) aCAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGgtgt < 5:102897/139‑1 (MQ=255) cATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTg < 1:243908/63‑1 (MQ=255) cATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTg > 2:247745/1‑63 (MQ=255) cATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTg < 1:247745/63‑1 (MQ=255) cATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTg > 2:243908/1‑63 (MQ=255) aTCGATGAAATTGAAGAACTGTCTCCGGACTTTC‑‑ATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCGGACAt < 8:127753/139‑1 (MQ=255) aTCGATGAAATTGAAGAACTGTCTCCGGACTTTC‑‑ATGATAGCTCCCGGACCGTGCAGCCCTGATGAGGAGGGAATCATCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCGGACAt < 8:123864/139‑1 (MQ=255) gATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCGGACAt < 6:171533/138‑1 (MQ=255) gATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCGGACAt < 8:284462/138‑1 (MQ=255) aaaTTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCGGACATCAGTc < 4:252512/139‑1 (MQ=255) aaTTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCTGACATCAGTc < 2:233353/138‑1 (MQ=255) aTTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCGGACATCAGTCCa < 3:268591/139‑1 (MQ=255) gaaCTGTCTCCGGACTTTCTGATGAAATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCGGACATCAGTCCATCGcac < 2:53839/139‑1 (MQ=255) ctcCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCGGACATCAGTCCATCGCACAAGTGtt < 5:167602/139‑1 (MQ=255) ctcCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCGGACATCAGTCCATCGCACAAGTGtt < 6:209604/139‑1 (MQ=255) tcCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCGGACATCAGTCCATCGCACAAGTGTTc > 1:175902/1‑139 (MQ=255) tcCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCGGACATCAGTCCATCGCACAAGTGTTc > 8:293606/1‑139 (MQ=255) cGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCGGACATCAGTCCATCGCACAAGTGtt < 1:184575/136‑1 (MQ=255) ttCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCGGACATCAGTCCATCGCACAAGTGTTCGGTGGTGa > 4:116063/1‑139 (MQ=255) | ATTTTAATGATTGATAACTACGATTCATTCACGTACAACTTGGTACAGTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCATCACAATCGATGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTAAACATTTCGCAGGGAAAATTCCTATTTTCGGTGTATGTCTCGGACATCAGTCCATCGCACAAGTGTTCGGTGGTGA > CP006881/84293‑84564 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |